RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 MFSD14BQ5SR56 506 aa17.9■□□□□ 0.46
CAPN3-207ENST00000397200 SPTY2D1Q68D10 685 aaPredicted RBP17.9■□□□□ 0.46
CAPN3-207ENST00000397200 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.9■□□□□ 0.46
CAPN3-207ENST00000397200 TIAM2Q8IVF5 1701 aa17.89■□□□□ 0.45
CAPN3-207ENST00000397200 RAD17O75943 681 aa17.89■□□□□ 0.45
CAPN3-207ENST00000397200 MAP3K12Q12852 859 aa17.89■□□□□ 0.45
CAPN3-207ENST00000397200 LRRFIP1Q32MZ4 808 aaKnown RBP17.89■□□□□ 0.45
CAPN3-207ENST00000397200 RNF181Q9P0P0 153 aa17.89■□□□□ 0.45
CAPN3-207ENST00000397200 RFX7Q2KHR2 1363 aa17.88■□□□□ 0.45
CAPN3-207ENST00000397200 MAST2Q6P0Q8 1798 aa17.88■□□□□ 0.45
CAPN3-207ENST00000397200 DCAF8L1A6NGE4 600 aa17.88■□□□□ 0.45
CAPN3-207ENST00000397200 DACT2Q5SW24 774 aa17.88■□□□□ 0.45
CAPN3-207ENST00000397200 RAI14Q9P0K7 980 aa17.88■□□□□ 0.45
CAPN3-207ENST00000397200 FZD9O00144 591 aa17.87■□□□□ 0.45
CAPN3-207ENST00000397200 LDHBP07195 334 aaKnown RBP17.87■□□□□ 0.45
CAPN3-207ENST00000397200 EIF6P56537 245 aaKnown RBP17.87■□□□□ 0.45
CAPN3-207ENST00000397200 FKBP1AP62942 108 aaKnown RBP17.87■□□□□ 0.45
CAPN3-207ENST00000397200 CIAPIN1Q6FI81 312 aa17.87■□□□□ 0.45
CAPN3-207ENST00000397200 ZSCAN25Q6NSZ9 544 aa17.87■□□□□ 0.45
CAPN3-207ENST00000397200 TICAM2Q86XR7 235 aa17.87■□□□□ 0.45
CAPN3-207ENST00000397200 IL27Q8NEV9 243 aa17.87■□□□□ 0.45
CAPN3-207ENST00000397200 HIP1O00291 1037 aa17.87■□□□□ 0.45
CAPN3-207ENST00000397200 PSMD14O00487 310 aa17.87■□□□□ 0.45
CAPN3-207ENST00000397200 SGSM2O43147 1006 aa17.87■□□□□ 0.45
CAPN3-207ENST00000397200 PRDX5P30044 214 aa17.87■□□□□ 0.45
CAPN3-207ENST00000397200 DEKP35659 375 aaKnown RBP17.87■□□□□ 0.45
CAPN3-207ENST00000397200 CXCL9Q07325 125 aa17.87■□□□□ 0.45
CAPN3-207ENST00000397200 TNIP1Q15025 636 aa17.87■□□□□ 0.45
CAPN3-207ENST00000397200 C9orf131Q5VYM1 1079 aa17.87■□□□□ 0.45
CAPN3-207ENST00000397200 MXD3Q9BW11 206 aa17.87■□□□□ 0.45
CAPN3-207ENST00000397200 IGSF3O75054 1194 aa17.86■□□□□ 0.45
CAPN3-207ENST00000397200 SLC9C2Q5TAH2 1124 aa17.86■□□□□ 0.45
CAPN3-207ENST00000397200 DZIP1Q86YF9 867 aaKnown RBP17.86■□□□□ 0.45
CAPN3-207ENST00000397200 CERS5Q8N5B7 392 aa17.86■□□□□ 0.45
CAPN3-207ENST00000397200 IL25Q9H293 177 aa17.86■□□□□ 0.45
CAPN3-207ENST00000397200 DIAPH3Q9NSV4 1193 aa17.86■□□□□ 0.45
CAPN3-207ENST00000397200 SUGT1Q9Y2Z0 365 aa17.86■□□□□ 0.45
CAPN3-207ENST00000397200 RNF113AO15541 343 aaKnown RBP17.85■□□□□ 0.45
CAPN3-207ENST00000397200 ZFYP08048 801 aaPredicted RBP17.85■□□□□ 0.45
CAPN3-207ENST00000397200 VIL1P09327 827 aaKnown RBP17.85■□□□□ 0.45
CAPN3-207ENST00000397200 PDE6AP16499 860 aa17.85■□□□□ 0.45
CAPN3-207ENST00000397200 MCCP23508 829 aa17.85■□□□□ 0.45
CAPN3-207ENST00000397200 RSBN1LQ6PCB5 846 aaPredicted RBP17.85■□□□□ 0.45
CAPN3-207ENST00000397200 MAGEB6Q8N7X4 407 aa17.85■□□□□ 0.45
CAPN3-207ENST00000397200 SPRYD3Q8NCJ5 442 aa17.85■□□□□ 0.45
CAPN3-207ENST00000397200 MYO3BQ8WXR4 1341 aa17.85■□□□□ 0.45
CAPN3-207ENST00000397200 RAD50Q92878 1312 aa17.85■□□□□ 0.45
CAPN3-207ENST00000397200 ST18O60284 1047 aa17.84■□□□□ 0.45
CAPN3-207ENST00000397200 MECOMQ03112 1051 aa17.84■□□□□ 0.45
CAPN3-207ENST00000397200 GRIK5Q16478 980 aa17.84■□□□□ 0.45
CAPN3-207ENST00000397200 ADD2P35612 726 aa17.83■□□□□ 0.45
CAPN3-207ENST00000397200 NAA16Q6N069 864 aaPredicted RBP17.83■□□□□ 0.45
CAPN3-207ENST00000397200 NSUN4Q96CB9 384 aaKnown RBP17.83■□□□□ 0.45
CAPN3-207ENST00000397200 ANO2Q9NQ90 1003 aa17.83■□□□□ 0.45
CAPN3-207ENST00000397200 MAST3O60307 1309 aa17.83■□□□□ 0.45
CAPN3-207ENST00000397200 ZNF541Q9H0D2 1346 aa17.83■□□□□ 0.45
CAPN3-207ENST00000397200 UTRNP46939 3433 aa17.83■□□□□ 0.45
CAPN3-207ENST00000397200 F8W031 263 aaPredicted RBP17.83■□□□□ 0.44
CAPN3-207ENST00000397200 CHGBP05060 677 aa17.83■□□□□ 0.44
CAPN3-207ENST00000397200 HSPA4P34932 840 aa17.83■□□□□ 0.44
CAPN3-207ENST00000397200 GSTO1P78417 241 aa17.83■□□□□ 0.44
CAPN3-207ENST00000397200 UBE3CQ15386 1083 aa17.83■□□□□ 0.44
CAPN3-207ENST00000397200 TMED8Q6PL24 325 aaPredicted RBP17.83■□□□□ 0.44
CAPN3-207ENST00000397200 TTF2Q9UNY4 1162 aaKnown RBP17.83■□□□□ 0.44
CAPN3-207ENST00000397200 ZNF532Q9HCE3 1301 aa17.83■□□□□ 0.44
CAPN3-207ENST00000397200 MYH2Q9UKX2 1941 aa17.83■□□□□ 0.44
CAPN3-207ENST00000397200 CYP7A1P22680 504 aa17.82■□□□□ 0.44
CAPN3-207ENST00000397200 NMIQ13287 307 aaPredicted RBP17.82■□□□□ 0.44
CAPN3-207ENST00000397200 RAB3GAP1Q15042 981 aa17.82■□□□□ 0.44
CAPN3-207ENST00000397200 CWC27Q6UX04 472 aaKnown RBP17.82■□□□□ 0.44
CAPN3-207ENST00000397200 KIAA0825Q8IV33 1275 aa17.82■□□□□ 0.44
CAPN3-207ENST00000397200 SLF2Q8IX21 1173 aa17.82■□□□□ 0.44
CAPN3-207ENST00000397200 AGBL3Q8NEM8 1001 aa17.82■□□□□ 0.44
CAPN3-207ENST00000397200 RUFY2Q8WXA3 655 aa17.82■□□□□ 0.44
CAPN3-207ENST00000397200 LSG1Q9H089 658 aaKnown RBP17.82■□□□□ 0.44
CAPN3-207ENST00000397200 PALD1Q9ULE6 856 aa17.82■□□□□ 0.44
CAPN3-207ENST00000397200 GJA3Q9Y6H8 435 aa17.82■□□□□ 0.44
CAPN3-207ENST00000397200 TCRBV5S4A2TA0A5A2 114 aa17.81■□□□□ 0.44
CAPN3-207ENST00000397200 SLFNL1Q499Z3 407 aa17.81■□□□□ 0.44
CAPN3-207ENST00000397200 ZMYM1Q5SVZ6 1142 aa17.81■□□□□ 0.44
CAPN3-207ENST00000397200 ZNF384Q8TF68 577 aa17.81■□□□□ 0.44
CAPN3-207ENST00000397200 APPBP2Q92624 585 aa17.81■□□□□ 0.44
CAPN3-207ENST00000397200 FAM227BQ96M60 508 aa17.81■□□□□ 0.44
CAPN3-207ENST00000397200 ZBTB12Q9Y330 459 aaPredicted RBP17.81■□□□□ 0.44
CAPN3-207ENST00000397200 ZC3H4Q9UPT8 1303 aaKnown RBP17.8■□□□□ 0.44
CAPN3-207ENST00000397200 A0A0D9SFI3 127 aa17.8■□□□□ 0.44
CAPN3-207ENST00000397200 LDHCP07864 332 aa17.8■□□□□ 0.44
CAPN3-207ENST00000397200 RPS12P25398 132 aaKnown RBP17.8■□□□□ 0.44
CAPN3-207ENST00000397200 MCM2P49736 904 aa17.8■□□□□ 0.44
CAPN3-207ENST00000397200 DIXDC1Q155Q3 683 aa17.8■□□□□ 0.44
CAPN3-207ENST00000397200 HELLSQ9NRZ9 838 aa17.8■□□□□ 0.44
CAPN3-207ENST00000397200 MCM4P33991 863 aa17.8■□□□□ 0.44
CAPN3-207ENST00000397200 GPC2Q8N158 579 aa17.8■□□□□ 0.44
CAPN3-207ENST00000397200 GMLQ99445 158 aa17.8■□□□□ 0.44
CAPN3-207ENST00000397200 SCNN1DP51172 638 aa17.79■□□□□ 0.44
CAPN3-207ENST00000397200 MCMDC2Q4G0Z9 681 aa17.79■□□□□ 0.44
CAPN3-207ENST00000397200 OGFOD1Q8N543 542 aa17.79■□□□□ 0.44
CAPN3-207ENST00000397200 HDAC9Q9UKV0 1011 aa17.79■□□□□ 0.44
CAPN3-207ENST00000397200 MROH7-TTC4A0A0A0MT08 1334 aa17.78■□□□□ 0.44
CAPN3-207ENST00000397200 USP17L8P0C7I0 530 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms