RNA–Protein interactions for RNA: ENST00000397087.7

RAPGEF4-203, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-203ENST00000397087 SPTLC3Q9NUV7 552 aa7.06□□□□□ -1.28
RAPGEF4-203ENST00000397087 ZNF330Q9Y3S2 320 aaPredicted RBP7.06□□□□□ -1.28
RAPGEF4-203ENST00000397087 PRPF40AO75400 957 aaKnown RBP7.06□□□□□ -1.28
RAPGEF4-203ENST00000397087 A1BGP04217 495 aa7.06□□□□□ -1.28
RAPGEF4-203ENST00000397087 AIMP1Q12904 312 aaKnown RBP7.06□□□□□ -1.28
RAPGEF4-203ENST00000397087 CCDC178Q5BJE1 867 aa7.06□□□□□ -1.28
RAPGEF4-203ENST00000397087 TMC4Q7Z404 712 aa7.06□□□□□ -1.28
RAPGEF4-203ENST00000397087 DNAJC10Q8IXB1 793 aa7.06□□□□□ -1.28
RAPGEF4-203ENST00000397087 WASF1Q92558 559 aa7.06□□□□□ -1.28
RAPGEF4-203ENST00000397087 ANKS1AQ92625 1134 aa7.06□□□□□ -1.28
RAPGEF4-203ENST00000397087 KRT23Q9C075 422 aa7.06□□□□□ -1.28
RAPGEF4-203ENST00000397087 TBC1D2BQ9UPU7 963 aa7.06□□□□□ -1.28
RAPGEF4-203ENST00000397087 ESPNB1AK53 854 aa7.05□□□□□ -1.28
RAPGEF4-203ENST00000397087 LARGE1O95461 756 aa7.05□□□□□ -1.28
RAPGEF4-203ENST00000397087 NEMFO60524 1076 aa7.05□□□□□ -1.28
RAPGEF4-203ENST00000397087 STOX1Q6ZVD7 989 aa7.05□□□□□ -1.28
RAPGEF4-203ENST00000397087 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.05□□□□□ -1.28
RAPGEF4-203ENST00000397087 BSDC1Q9NW68 430 aaPredicted RBP7.05□□□□□ -1.28
RAPGEF4-203ENST00000397087 ANKRD31Q8N7Z5 1873 aa7.05□□□□□ -1.28
RAPGEF4-203ENST00000397087 PATL2C9JE40 543 aaKnown RBP7.05□□□□□ -1.28
RAPGEF4-203ENST00000397087 PDIA3P30101 505 aaKnown RBP7.05□□□□□ -1.28
RAPGEF4-203ENST00000397087 SBK1Q52WX2 424 aa7.05□□□□□ -1.28
RAPGEF4-203ENST00000397087 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.05□□□□□ -1.28
RAPGEF4-203ENST00000397087 DDX17Q92841 729 aaKnown RBP7.05□□□□□ -1.28
RAPGEF4-203ENST00000397087 UPF3BQ9BZI7 483 aaKnown RBP7.05□□□□□ -1.28
RAPGEF4-203ENST00000397087 RBSNQ9H1K0 784 aa7.05□□□□□ -1.28
RAPGEF4-203ENST00000397087 ZKSCAN5Q9Y2L8 839 aa7.05□□□□□ -1.28
RAPGEF4-203ENST00000397087 COL4A1P02462 1669 aa7.05□□□□□ -1.28
RAPGEF4-203ENST00000397087 ARFGEF1Q9Y6D6 1849 aa7.05□□□□□ -1.28
RAPGEF4-203ENST00000397087 M0R2C6 588 aa7.04□□□□□ -1.28
RAPGEF4-203ENST00000397087 SH2B2O14492 632 aaPredicted RBP7.04□□□□□ -1.28
RAPGEF4-203ENST00000397087 IRS4O14654 1257 aaPredicted RBP7.04□□□□□ -1.28
RAPGEF4-203ENST00000397087 OFD1O75665 1012 aa7.04□□□□□ -1.28
RAPGEF4-203ENST00000397087 ITGA6P23229 1130 aa7.04□□□□□ -1.28
RAPGEF4-203ENST00000397087 ORC2Q13416 577 aaPredicted RBP7.04□□□□□ -1.28
RAPGEF4-203ENST00000397087 ZNF579Q8NAF0 562 aaKnown RBP7.04□□□□□ -1.28
RAPGEF4-203ENST00000397087 CERKQ8TCT0 537 aa7.04□□□□□ -1.28
RAPGEF4-203ENST00000397087 KCNG4Q8TDN1 519 aa7.04□□□□□ -1.28
RAPGEF4-203ENST00000397087 PLIN4Q96Q06 1357 aa7.04□□□□□ -1.28
RAPGEF4-203ENST00000397087 CTDNEP1O95476 244 aa7.04□□□□□ -1.28
RAPGEF4-203ENST00000397087 CCDC192P0DO97 292 aa7.04□□□□□ -1.28
RAPGEF4-203ENST00000397087 SYCP1Q15431 976 aa7.04□□□□□ -1.28
RAPGEF4-203ENST00000397087 LARP1BQ659C4 914 aaKnown RBP7.04□□□□□ -1.28
RAPGEF4-203ENST00000397087 Q6ZUG5 572 aa7.04□□□□□ -1.28
RAPGEF4-203ENST00000397087 DZIP3Q86Y13 1208 aaKnown RBP7.04□□□□□ -1.28
RAPGEF4-203ENST00000397087 LEO1Q8WVC0 666 aaPredicted RBP7.04□□□□□ -1.28
RAPGEF4-203ENST00000397087 ANKRD2Q9GZV1 360 aa7.04□□□□□ -1.28
RAPGEF4-203ENST00000397087 RNF41Q9H4P4 317 aaPredicted RBP7.04□□□□□ -1.28
RAPGEF4-203ENST00000397087 SLC26A4O43511 780 aa7.04□□□□□ -1.28
RAPGEF4-203ENST00000397087 U2AF2P26368 475 aaKnown RBP eCLIP7.04□□□□□ -1.28
RAPGEF4-203ENST00000397087 SCRN1Q12765 414 aa7.04□□□□□ -1.28
RAPGEF4-203ENST00000397087 LRRC24Q50LG9 513 aa7.04□□□□□ -1.28
RAPGEF4-203ENST00000397087 ENGASEQ8NFI3 743 aa7.04□□□□□ -1.28
RAPGEF4-203ENST00000397087 RBM27Q9P2N5 1060 aaKnown RBP7.04□□□□□ -1.28
RAPGEF4-203ENST00000397087 ASAP1Q9ULH1 1129 aa7.04□□□□□ -1.28
RAPGEF4-203ENST00000397087 BRWD3Q6RI45 1802 aa7.04□□□□□ -1.28
RAPGEF4-203ENST00000397087 MSNP26038 577 aaKnown RBP7.03□□□□□ -1.28
RAPGEF4-203ENST00000397087 SMARCA1P28370 1054 aa7.03□□□□□ -1.28
RAPGEF4-203ENST00000397087 GTF2F1P35269 517 aaKnown RBP eCLIP7.03□□□□□ -1.28
RAPGEF4-203ENST00000397087 PRIM1P49642 420 aaKnown RBP7.03□□□□□ -1.28
RAPGEF4-203ENST00000397087 FOSBP53539 338 aa7.03□□□□□ -1.28
RAPGEF4-203ENST00000397087 GDPD2Q9HCC8 539 aa7.03□□□□□ -1.28
RAPGEF4-203ENST00000397087 MYO3BQ8WXR4 1341 aa7.03□□□□□ -1.28
RAPGEF4-203ENST00000397087 ORC4O43929 436 aa7.03□□□□□ -1.28
RAPGEF4-203ENST00000397087 CALM1P0DP23 149 aa7.03□□□□□ -1.28
RAPGEF4-203ENST00000397087 CALM2P0DP24 149 aa7.03□□□□□ -1.28
RAPGEF4-203ENST00000397087 CALM3P0DP25 149 aa7.03□□□□□ -1.28
RAPGEF4-203ENST00000397087 HSPA2P54652 639 aa7.03□□□□□ -1.28
RAPGEF4-203ENST00000397087 DDB1Q16531 1140 aa7.03□□□□□ -1.28
RAPGEF4-203ENST00000397087 CCDC83Q8IWF9 413 aa7.03□□□□□ -1.28
RAPGEF4-203ENST00000397087 FAM200AQ8TCP9 573 aa7.03□□□□□ -1.28
RAPGEF4-203ENST00000397087 OSBP2Q969R2 916 aa7.03□□□□□ -1.28
RAPGEF4-203ENST00000397087 STRBPQ96SI9 672 aaKnown RBP7.03□□□□□ -1.28
RAPGEF4-203ENST00000397087 TCP11L1Q9NUJ3 509 aa7.03□□□□□ -1.28
RAPGEF4-203ENST00000397087 HPS5Q9UPZ3 1129 aa7.03□□□□□ -1.28
RAPGEF4-203ENST00000397087 KLRG2A4D1S0 409 aaPredicted RBP7.03□□□□□ -1.28
RAPGEF4-203ENST00000397087 KDM4AO75164 1064 aa7.03□□□□□ -1.28
RAPGEF4-203ENST00000397087 RPS6KA4O75676 772 aa7.03□□□□□ -1.28
RAPGEF4-203ENST00000397087 BMP15O95972 392 aa7.03□□□□□ -1.28
RAPGEF4-203ENST00000397087 MCAMP43121 646 aa7.03□□□□□ -1.28
RAPGEF4-203ENST00000397087 NOVP48745 357 aa7.03□□□□□ -1.28
RAPGEF4-203ENST00000397087 RBM6P78332 1123 aaKnown RBP7.03□□□□□ -1.28
RAPGEF4-203ENST00000397087 ADALQ6DHV7 355 aa7.03□□□□□ -1.28
RAPGEF4-203ENST00000397087 GTPBP4Q9BZE4 634 aaKnown RBP7.03□□□□□ -1.28
RAPGEF4-203ENST00000397087 NARFQ9UHQ1 456 aa7.03□□□□□ -1.28
RAPGEF4-203ENST00000397087 PYM1Q9BRP8 204 aaKnown RBP7.03□□□□□ -1.28
RAPGEF4-203ENST00000397087 RRAGDQ9NQL2 400 aaPredicted RBP7.03□□□□□ -1.28
RAPGEF4-203ENST00000397087 DENND2AQ9ULE3 1009 aa7.03□□□□□ -1.28
RAPGEF4-203ENST00000397087 LOC102724428A0A0B4J2F2 783 aa7.02□□□□□ -1.29
RAPGEF4-203ENST00000397087 TOM1O60784 492 aa7.02□□□□□ -1.29
RAPGEF4-203ENST00000397087 CRKLP46109 303 aaKnown RBP7.02□□□□□ -1.29
RAPGEF4-203ENST00000397087 SIK1P57059 783 aa7.02□□□□□ -1.29
RAPGEF4-203ENST00000397087 MAP3K12Q12852 859 aa7.02□□□□□ -1.29
RAPGEF4-203ENST00000397087 MAP3K11Q16584 847 aa7.02□□□□□ -1.29
RAPGEF4-203ENST00000397087 FBXO33Q7Z6M2 555 aa7.02□□□□□ -1.29
RAPGEF4-203ENST00000397087 PLA2G4DQ86XP0 818 aa7.02□□□□□ -1.29
RAPGEF4-203ENST00000397087 MRFAP1L1Q96HT8 127 aa7.02□□□□□ -1.29
RAPGEF4-203ENST00000397087 RBM28Q9NW13 759 aaKnown RBP7.02□□□□□ -1.29
RAPGEF4-203ENST00000397087 ANGEL1Q9UNK9 670 aaKnown RBP7.02□□□□□ -1.29
RAPGEF4-203ENST00000397087 SUGT1Q9Y2Z0 365 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms