RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 CRKP46108 304 aa35.9■■■■□ 3.34
CHCHD4-202ENST00000396914 TBC1D9Q6ZT07 1266 aa35.9■■■■□ 3.34
CHCHD4-202ENST00000396914 GGA3Q9NZ52 723 aa35.9■■■■□ 3.34
CHCHD4-202ENST00000396914 SERPINA10Q9UK55 444 aa35.9■■■■□ 3.34
CHCHD4-202ENST00000396914 ASTN2O75129 1339 aaPredicted RBP35.89■■■■□ 3.34
CHCHD4-202ENST00000396914 WNT10BO00744 389 aa35.89■■■■□ 3.34
CHCHD4-202ENST00000396914 B4GALNT3Q6L9W6 998 aa35.89■■■■□ 3.34
CHCHD4-202ENST00000396914 ERICH6Q7L0X2 663 aa35.89■■■■□ 3.34
CHCHD4-202ENST00000396914 DZIP1Q86YF9 867 aaKnown RBP35.89■■■■□ 3.34
CHCHD4-202ENST00000396914 TEKT1Q969V4 418 aa35.89■■■■□ 3.34
CHCHD4-202ENST00000396914 PCDHAC2Q9Y5I4 1007 aa35.89■■■■□ 3.34
CHCHD4-202ENST00000396914 ZAP70P43403 619 aa35.88■■■■□ 3.33
CHCHD4-202ENST00000396914 ANGEL2Q5VTE6 544 aaKnown RBP35.88■■■■□ 3.33
CHCHD4-202ENST00000396914 LRP2BPQ9P2M1 347 aa35.88■■■■□ 3.33
CHCHD4-202ENST00000396914 MYO1BO43795 1136 aa35.87■■■■□ 3.33
CHCHD4-202ENST00000396914 GPATCH3Q96I76 525 aa35.87■■■■□ 3.33
CHCHD4-202ENST00000396914 PGAP2Q9UHJ9 254 aa35.87■■■■□ 3.33
CHCHD4-202ENST00000396914 RAI14Q9P0K7 980 aa35.86■■■■□ 3.33
CHCHD4-202ENST00000396914 MTMR14Q8NCE2 650 aa35.85■■■■□ 3.33
CHCHD4-202ENST00000396914 NDUFB9Q9Y6M9 179 aa35.85■■■■□ 3.33
CHCHD4-202ENST00000396914 SPDYE2BA6NHP3 402 aa35.84■■■■□ 3.33
CHCHD4-202ENST00000396914 SPDYE6P0CI01 402 aa35.84■■■■□ 3.33
CHCHD4-202ENST00000396914 HDLBPQ00341 1268 aaKnown RBP35.84■■■■□ 3.33
CHCHD4-202ENST00000396914 PRMT6Q96LA8 375 aaPredicted RBP35.84■■■■□ 3.33
CHCHD4-202ENST00000396914 DNAJC2Q99543 621 aaKnown RBP35.84■■■■□ 3.33
CHCHD4-202ENST00000396914 CYP2E1P05181 493 aaPredicted RBP35.83■■■■□ 3.33
CHCHD4-202ENST00000396914 DIXDC1Q155Q3 683 aa35.83■■■■□ 3.33
CHCHD4-202ENST00000396914 CDC37L1Q7L3B6 337 aa35.83■■■■□ 3.33
CHCHD4-202ENST00000396914 KRT26Q7Z3Y9 468 aa35.83■■■■□ 3.33
CHCHD4-202ENST00000396914 SULF1Q8IWU6 871 aa35.83■■■■□ 3.33
CHCHD4-202ENST00000396914 GLIS2Q9BZE0 524 aaPredicted RBP35.83■■■■□ 3.33
CHCHD4-202ENST00000396914 USP48Q86UV5 1035 aa35.83■■■■□ 3.33
CHCHD4-202ENST00000396914 SMC5Q8IY18 1101 aa35.83■■■■□ 3.33
CHCHD4-202ENST00000396914 ZBED3Q96IU2 234 aaPredicted RBP35.83■■■■□ 3.33
CHCHD4-202ENST00000396914 AKAP11Q9UKA4 1901 aa35.82■■■■□ 3.33
CHCHD4-202ENST00000396914 CLRN2A0PK11 232 aa35.82■■■■□ 3.32
CHCHD4-202ENST00000396914 BOLA2Q9H3K6 86 aa35.82■■■■□ 3.32
CHCHD4-202ENST00000396914 ECHDC1Q9NTX5 307 aa35.82■■■■□ 3.32
CHCHD4-202ENST00000396914 ATP5JP18859 108 aa35.81■■■■□ 3.32
CHCHD4-202ENST00000396914 SLF2Q8IX21 1173 aa35.81■■■■□ 3.32
CHCHD4-202ENST00000396914 SCAF8Q9UPN6 1271 aaKnown RBP35.81■■■■□ 3.32
CHCHD4-202ENST00000396914 ITGBL1O95965 494 aaPredicted RBP35.8■■■■□ 3.32
CHCHD4-202ENST00000396914 MECOMQ03112 1051 aa35.8■■■■□ 3.32
CHCHD4-202ENST00000396914 HHIPL2Q6UWX4 724 aa35.8■■■■□ 3.32
CHCHD4-202ENST00000396914 PPIL4Q8WUA2 492 aaKnown RBP eCLIP35.8■■■■□ 3.32
CHCHD4-202ENST00000396914 MRIQ9BWK5 157 aa35.8■■■■□ 3.32
CHCHD4-202ENST00000396914 VEZTQ9HBM0 779 aa35.8■■■■□ 3.32
CHCHD4-202ENST00000396914 TRAF5O00463 557 aa35.79■■■■□ 3.32
CHCHD4-202ENST00000396914 ZDHHC15Q96MV8 337 aa35.79■■■■□ 3.32
CHCHD4-202ENST00000396914 LNPKQ9C0E8 428 aa35.79■■■■□ 3.32
CHCHD4-202ENST00000396914 TDRD3Q9H7E2 651 aaKnown RBP35.79■■■■□ 3.32
CHCHD4-202ENST00000396914 PIH1D3Q9NQM4 214 aaKnown RBP35.79■■■■□ 3.32
CHCHD4-202ENST00000396914 ADM5C9JUS6 153 aa35.78■■■■□ 3.32
CHCHD4-202ENST00000396914 TSHZ3Q63HK5 1081 aa35.78■■■■□ 3.32
CHCHD4-202ENST00000396914 PITPNM2Q9BZ72 1349 aa35.77■■■■□ 3.32
CHCHD4-202ENST00000396914 IDH1O75874 414 aaKnown RBP35.77■■■■□ 3.32
CHCHD4-202ENST00000396914 GSTO1P78417 241 aa35.77■■■■□ 3.32
CHCHD4-202ENST00000396914 OTUD7AQ8TE49 926 aaPredicted RBP35.77■■■■□ 3.32
CHCHD4-202ENST00000396914 DAGLAQ9Y4D2 1042 aa35.77■■■■□ 3.32
CHCHD4-202ENST00000396914 POLR2AP24928 1970 aaKnown RBP35.77■■■■□ 3.32
CHCHD4-202ENST00000396914 AOX1Q06278 1338 aa35.76■■■■□ 3.32
CHCHD4-202ENST00000396914 GOLIM4O00461 696 aa35.76■■■■□ 3.32
CHCHD4-202ENST00000396914 APOBEC3FQ8IUX4 373 aaKnown RBP35.76■■■■□ 3.32
CHCHD4-202ENST00000396914 ANTXR1Q9H6X2 564 aa35.76■■■■□ 3.32
CHCHD4-202ENST00000396914 FMR1Q06787 632 aaKnown RBP eCLIP35.75■■■■□ 3.31
CHCHD4-202ENST00000396914 TTF1Q15361 905 aaPredicted RBP35.75■■■■□ 3.31
CHCHD4-202ENST00000396914 ZNF408Q9H9D4 720 aa35.75■■■■□ 3.31
CHCHD4-202ENST00000396914 ZNF70Q9UC06 446 aaPredicted RBP35.75■■■■□ 3.31
CHCHD4-202ENST00000396914 MX1P20591 662 aa35.74■■■■□ 3.31
CHCHD4-202ENST00000396914 CHD1LQ86WJ1 897 aa35.74■■■■□ 3.31
CHCHD4-202ENST00000396914 NSUN4Q96CB9 384 aaKnown RBP35.74■■■■□ 3.31
CHCHD4-202ENST00000396914 TMOD2Q9NZR1 351 aa35.74■■■■□ 3.31
CHCHD4-202ENST00000396914 LDHCP07864 332 aa35.74■■■■□ 3.31
CHCHD4-202ENST00000396914 NAA16Q6N069 864 aaPredicted RBP35.74■■■■□ 3.31
CHCHD4-202ENST00000396914 DLK2Q6UY11 383 aa35.74■■■■□ 3.31
CHCHD4-202ENST00000396914 HAUS7Q99871 368 aa35.74■■■■□ 3.31
CHCHD4-202ENST00000396914 PAG1Q9NWQ8 432 aa35.74■■■■□ 3.31
CHCHD4-202ENST00000396914 MYH2Q9UKX2 1941 aa35.73■■■■□ 3.31
CHCHD4-202ENST00000396914 PASKQ96RG2 1323 aa35.73■■■■□ 3.31
CHCHD4-202ENST00000396914 ECM29Q5VYK3 1845 aa35.73■■■■□ 3.31
CHCHD4-202ENST00000396914 NUCB1Q02818 461 aa35.73■■■■□ 3.31
CHCHD4-202ENST00000396914 SPDYE2Q495Y8 402 aa35.73■■■■□ 3.31
CHCHD4-202ENST00000396914 APOBEC3HQ6NTF7 200 aaKnown RBP35.73■■■■□ 3.31
CHCHD4-202ENST00000396914 ERC2O15083 957 aa35.72■■■■□ 3.31
CHCHD4-202ENST00000396914 MAP3K12Q12852 859 aa35.72■■■■□ 3.31
CHCHD4-202ENST00000396914 EDC3Q96F86 508 aaKnown RBP35.72■■■■□ 3.31
CHCHD4-202ENST00000396914 MROH7-TTC4A0A0A0MT08 1334 aa35.71■■■■□ 3.31
CHCHD4-202ENST00000396914 TTC41PQ6P2S7 1318 aa35.71■■■■□ 3.31
CHCHD4-202ENST00000396914 HSPA6P17066 643 aa35.71■■■■□ 3.31
CHCHD4-202ENST00000396914 APLP1P51693 650 aa35.71■■■■□ 3.31
CHCHD4-202ENST00000396914 NOL10Q9BSC4 688 aaKnown RBP35.71■■■■□ 3.31
CHCHD4-202ENST00000396914 TCP10L2B9ZVM9 353 aa35.7■■■■□ 3.31
CHCHD4-202ENST00000396914 BTDP43251 543 aa35.69■■■■□ 3.3
CHCHD4-202ENST00000396914 CACNB3P54284 484 aa35.69■■■■□ 3.3
CHCHD4-202ENST00000396914 ZNF384Q8TF68 577 aa35.69■■■■□ 3.3
CHCHD4-202ENST00000396914 USP40Q9NVE5 1235 aa35.69■■■■□ 3.3
CHCHD4-202ENST00000396914 MYO5AQ9Y4I1 1855 aaKnown RBP35.69■■■■□ 3.3
CHCHD4-202ENST00000396914 GAKO14976 1311 aa35.69■■■■□ 3.3
CHCHD4-202ENST00000396914 CELF2O95319 508 aaKnown RBP35.68■■■■□ 3.3
CHCHD4-202ENST00000396914 PRAMEF18Q5VWM3 479 aa35.68■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms