RNA–Protein interactions for RNA: ENST00000396682.6

RPA3-202, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RPA3, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-202ENST00000396682 FBXO33Q7Z6M2 555 aa16.75■□□□□ 0.27
RPA3-202ENST00000396682 ANKRD13AQ8IZ07 590 aa16.75■□□□□ 0.27
RPA3-202ENST00000396682 MRPL50Q8N5N7 158 aaKnown RBP16.75■□□□□ 0.27
RPA3-202ENST00000396682 VGLL2Q8N8G2 317 aa16.75■□□□□ 0.27
RPA3-202ENST00000396682 PTPN18Q99952 460 aa16.75■□□□□ 0.27
RPA3-202ENST00000396682 IQSEC3Q9UPP2 1182 aaPredicted RBP16.75■□□□□ 0.27
RPA3-202ENST00000396682 TESPA1A2RU30 521 aaPredicted RBP16.74■□□□□ 0.27
RPA3-202ENST00000396682 CRHR2Q13324 411 aa16.74■□□□□ 0.27
RPA3-202ENST00000396682 TNFAIP1Q13829 316 aa16.74■□□□□ 0.27
RPA3-202ENST00000396682 TCP10L2B9ZVM9 353 aa16.73■□□□□ 0.27
RPA3-202ENST00000396682 CAP1Q01518 475 aa16.73■□□□□ 0.27
RPA3-202ENST00000396682 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.73■□□□□ 0.27
RPA3-202ENST00000396682 OTOP1Q7RTM1 612 aa16.73■□□□□ 0.27
RPA3-202ENST00000396682 KLHDC4Q8TBB5 520 aa16.73■□□□□ 0.27
RPA3-202ENST00000396682 CNKSR2Q8WXI2 1034 aa16.73■□□□□ 0.27
RPA3-202ENST00000396682 OPTNQ96CV9 577 aa16.73■□□□□ 0.27
RPA3-202ENST00000396682 TMEM39BQ9GZU3 492 aa16.73■□□□□ 0.27
RPA3-202ENST00000396682 ELP3Q9H9T3 547 aa16.73■□□□□ 0.27
RPA3-202ENST00000396682 TRIM17Q9Y577 477 aa16.73■□□□□ 0.27
RPA3-202ENST00000396682 METTL24Q5JXM2 366 aa16.72■□□□□ 0.27
RPA3-202ENST00000396682 MS4A4AQ96JQ5 239 aa16.72■□□□□ 0.27
RPA3-202ENST00000396682 PDE8BO95263 885 aa16.71■□□□□ 0.27
RPA3-202ENST00000396682 CHAF1AQ13111 956 aaPredicted RBP16.71■□□□□ 0.27
RPA3-202ENST00000396682 PRPF38BQ5VTL8 546 aaKnown RBP16.71■□□□□ 0.27
RPA3-202ENST00000396682 VPS37DQ86XT2 251 aa16.71■□□□□ 0.27
RPA3-202ENST00000396682 SSH1Q8WYL5 1049 aa16.71■□□□□ 0.27
RPA3-202ENST00000396682 USP44Q9H0E7 712 aa16.71■□□□□ 0.27
RPA3-202ENST00000396682 PTPRCP08575 1304 aa16.7■□□□□ 0.26
RPA3-202ENST00000396682 ZEB1P37275 1124 aaPredicted RBP16.7■□□□□ 0.26
RPA3-202ENST00000396682 BCAMP50895 628 aa16.7■□□□□ 0.26
RPA3-202ENST00000396682 CACNB3P54284 484 aa16.7■□□□□ 0.26
RPA3-202ENST00000396682 VGLL4Q14135 290 aa16.7■□□□□ 0.26
RPA3-202ENST00000396682 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.7■□□□□ 0.26
RPA3-202ENST00000396682 CD99L2Q8TCZ2 262 aa16.7■□□□□ 0.26
RPA3-202ENST00000396682 BRI3BPQ8WY22 251 aa16.7■□□□□ 0.26
RPA3-202ENST00000396682 FGFR2P21802 821 aa16.69■□□□□ 0.26
RPA3-202ENST00000396682 HDLBPQ00341 1268 aaKnown RBP16.69■□□□□ 0.26
RPA3-202ENST00000396682 CAVIN4Q5BKX8 364 aa16.69■□□□□ 0.26
RPA3-202ENST00000396682 OTUD7BQ6GQQ9 843 aa16.69■□□□□ 0.26
RPA3-202ENST00000396682 TBC1D22AQ8WUA7 517 aa16.69■□□□□ 0.26
RPA3-202ENST00000396682 ERO1AQ96HE7 468 aa16.69■□□□□ 0.26
RPA3-202ENST00000396682 KIAA0100Q14667 2235 aaKnown RBP16.68■□□□□ 0.26
RPA3-202ENST00000396682 RFX5P48382 616 aaPredicted RBP16.68■□□□□ 0.26
RPA3-202ENST00000396682 TNNI2P48788 182 aa16.68■□□□□ 0.26
RPA3-202ENST00000396682 MAP3K9P80192 1104 aa16.68■□□□□ 0.26
RPA3-202ENST00000396682 APOBEC3HQ6NTF7 200 aaKnown RBP16.68■□□□□ 0.26
RPA3-202ENST00000396682 TEKT1Q969V4 418 aa16.68■□□□□ 0.26
RPA3-202ENST00000396682 ZDHHC15Q96MV8 337 aa16.68■□□□□ 0.26
RPA3-202ENST00000396682 PTPN22Q9Y2R2 807 aa16.68■□□□□ 0.26
RPA3-202ENST00000396682 RBBP6Q7Z6E9 1792 aaKnown RBP16.67■□□□□ 0.26
RPA3-202ENST00000396682 POTEFA5A3E0 1075 aa16.67■□□□□ 0.26
RPA3-202ENST00000396682 FRAT2O75474 233 aaPredicted RBP16.67■□□□□ 0.26
RPA3-202ENST00000396682 SP3Q02447 781 aa16.67■□□□□ 0.26
RPA3-202ENST00000396682 KIF16BQ96L93 1317 aa16.67■□□□□ 0.26
RPA3-202ENST00000396682 CCL15-CCL14A0A0B4J2E2 113 aa16.66■□□□□ 0.26
RPA3-202ENST00000396682 E9PSI1 815 aa16.66■□□□□ 0.26
RPA3-202ENST00000396682 PUM3Q15397 648 aaKnown RBP16.66■□□□□ 0.26
RPA3-202ENST00000396682 CCL15Q16663 113 aa16.66■□□□□ 0.26
RPA3-202ENST00000396682 FAM43AQ8N2R8 423 aa16.66■□□□□ 0.26
RPA3-202ENST00000396682 OTUD5Q96G74 571 aa16.66■□□□□ 0.26
RPA3-202ENST00000396682 MRIQ9BWK5 157 aa16.66■□□□□ 0.26
RPA3-202ENST00000396682 EFCC1Q9HA90 598 aa16.66■□□□□ 0.26
RPA3-202ENST00000396682 SNCAIPQ9Y6H5 919 aa16.66■□□□□ 0.26
RPA3-202ENST00000396682 MYH13Q9UKX3 1938 aa16.65■□□□□ 0.26
RPA3-202ENST00000396682 SPDYE5A6NIY4 337 aa16.65■□□□□ 0.26
RPA3-202ENST00000396682 EYA2O00167 538 aa16.65■□□□□ 0.26
RPA3-202ENST00000396682 GTF2A2P52657 109 aa16.65■□□□□ 0.26
RPA3-202ENST00000396682 SLFN5Q08AF3 891 aa16.65■□□□□ 0.26
RPA3-202ENST00000396682 INTS3Q68E01 1043 aaKnown RBP16.65■□□□□ 0.26
RPA3-202ENST00000396682 FAM83AQ86UY5 434 aa16.65■□□□□ 0.26
RPA3-202ENST00000396682 ARMC5Q96C12 935 aa16.65■□□□□ 0.26
RPA3-202ENST00000396682 SUGT1Q9Y2Z0 365 aa16.65■□□□□ 0.26
RPA3-202ENST00000396682 CSADQ9Y600 493 aa16.65■□□□□ 0.26
RPA3-202ENST00000396682 FKBP1CQ5VVH2 108 aa16.64■□□□□ 0.25
RPA3-202ENST00000396682 ATG9AQ7Z3C6 839 aa16.64■□□□□ 0.25
RPA3-202ENST00000396682 ZKSCAN4Q969J2 545 aaPredicted RBP16.64■□□□□ 0.25
RPA3-202ENST00000396682 RPAP1Q9BWH6 1393 aaPredicted RBP16.64■□□□□ 0.25
RPA3-202ENST00000396682 IFIT1P09914 478 aaKnown RBP16.63■□□□□ 0.25
RPA3-202ENST00000396682 TAF1CQ15572 869 aaPredicted RBP16.63■□□□□ 0.25
RPA3-202ENST00000396682 HHIPL2Q6UWX4 724 aa16.63■□□□□ 0.25
RPA3-202ENST00000396682 CDCA7LQ96GN5 454 aa16.63■□□□□ 0.25
RPA3-202ENST00000396682 WRNIP1Q96S55 665 aa16.63■□□□□ 0.25
RPA3-202ENST00000396682 MAST3O60307 1309 aa16.63■□□□□ 0.25
RPA3-202ENST00000396682 ZSWIM8A7E2V4 1837 aa16.63■□□□□ 0.25
RPA3-202ENST00000396682 IRF6O14896 467 aa16.62■□□□□ 0.25
RPA3-202ENST00000396682 ALDH1L2Q3SY69 923 aa16.62■□□□□ 0.25
RPA3-202ENST00000396682 ERO1BQ86YB8 467 aa16.62■□□□□ 0.25
RPA3-202ENST00000396682 LPIN2Q92539 896 aa16.62■□□□□ 0.25
RPA3-202ENST00000396682 ZFYVE28Q9HCC9 887 aa16.62■□□□□ 0.25
RPA3-202ENST00000396682 TMOD2Q9NZR1 351 aa16.62■□□□□ 0.25
RPA3-202ENST00000396682 SLC5A1P13866 664 aa16.61■□□□□ 0.25
RPA3-202ENST00000396682 DIXDC1Q155Q3 683 aa16.61■□□□□ 0.25
RPA3-202ENST00000396682 WDR66Q8TBY9 1149 aa16.61■□□□□ 0.25
RPA3-202ENST00000396682 BTBD19C9JJ37 291 aa16.6■□□□□ 0.25
RPA3-202ENST00000396682 CETPP11597 493 aa16.6■□□□□ 0.25
RPA3-202ENST00000396682 EN2P19622 333 aaPredicted RBP16.6■□□□□ 0.25
RPA3-202ENST00000396682 PPIL2Q13356 520 aa16.6■□□□□ 0.25
RPA3-202ENST00000396682 MIGA2Q7L4E1 593 aa16.6■□□□□ 0.25
RPA3-202ENST00000396682 TRMT2AQ8IZ69 625 aaKnown RBP16.6■□□□□ 0.25
RPA3-202ENST00000396682 ZNF333Q96JL9 665 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms