RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 SYNE3Q6ZMZ3 975 aa11.38□□□□□ -0.59
TRIM39-203ENST00000396547 MYD88Q99836 296 aa11.38□□□□□ -0.59
TRIM39-203ENST00000396547 CARD10Q9BWT7 1032 aa11.38□□□□□ -0.59
TRIM39-203ENST00000396547 PRDM11Q9NQV5 511 aa11.38□□□□□ -0.59
TRIM39-203ENST00000396547 DBNLQ9UJU6 430 aaKnown RBP11.38□□□□□ -0.59
TRIM39-203ENST00000396547 TMEM232C9JQI7 657 aa11.38□□□□□ -0.59
TRIM39-203ENST00000396547 TRIM66O15016 1216 aa11.38□□□□□ -0.59
TRIM39-203ENST00000396547 ZNF202O95125 648 aa11.38□□□□□ -0.59
TRIM39-203ENST00000396547 DHX32Q7L7V1 743 aaKnown RBP11.38□□□□□ -0.59
TRIM39-203ENST00000396547 FMR1NBQ8N0W7 255 aaPredicted RBP11.38□□□□□ -0.59
TRIM39-203ENST00000396547 CCDC191Q8NCU4 936 aa11.38□□□□□ -0.59
TRIM39-203ENST00000396547 OSBPL5Q9H0X9 879 aaPredicted RBP11.38□□□□□ -0.59
TRIM39-203ENST00000396547 L2HGDHQ9H9P8 463 aa11.38□□□□□ -0.59
TRIM39-203ENST00000396547 FAM53CQ9NYF3 392 aa11.38□□□□□ -0.59
TRIM39-203ENST00000396547 U3KPZ7 1027 aaPredicted RBP11.38□□□□□ -0.59
TRIM39-203ENST00000396547 ZNF831Q5JPB2 1677 aa11.38□□□□□ -0.59
TRIM39-203ENST00000396547 GIGYF1O75420 1035 aaPredicted RBP11.38□□□□□ -0.59
TRIM39-203ENST00000396547 MCMDC2Q4G0Z9 681 aa11.38□□□□□ -0.59
TRIM39-203ENST00000396547 BTG4Q9NY30 223 aa11.38□□□□□ -0.59
TRIM39-203ENST00000396547 COL15A1P39059 1388 aa11.38□□□□□ -0.59
TRIM39-203ENST00000396547 TNS2Q63HR2 1409 aa11.38□□□□□ -0.59
TRIM39-203ENST00000396547 ATP5J2-PTCD1G3V325 749 aa11.37□□□□□ -0.59
TRIM39-203ENST00000396547 PFKFB2O60825 505 aa11.37□□□□□ -0.59
TRIM39-203ENST00000396547 PTCD1O75127 700 aaKnown RBP11.37□□□□□ -0.59
TRIM39-203ENST00000396547 SASH3O75995 380 aa11.37□□□□□ -0.59
TRIM39-203ENST00000396547 MCM6Q14566 821 aa11.37□□□□□ -0.59
TRIM39-203ENST00000396547 SMC1AQ14683 1233 aaKnown RBP11.37□□□□□ -0.59
TRIM39-203ENST00000396547 QSER1Q2KHR3 1735 aa11.37□□□□□ -0.59
TRIM39-203ENST00000396547 SPTLC2O15270 562 aa11.37□□□□□ -0.59
TRIM39-203ENST00000396547 TOP1P11387 765 aaKnown RBP11.37□□□□□ -0.59
TRIM39-203ENST00000396547 CCDC93Q567U6 631 aa11.37□□□□□ -0.59
TRIM39-203ENST00000396547 HSP90AB3PQ58FF7 597 aa11.37□□□□□ -0.59
TRIM39-203ENST00000396547 C8orf76Q96K31 380 aa11.37□□□□□ -0.59
TRIM39-203ENST00000396547 DESI2Q9BSY9 194 aa11.37□□□□□ -0.59
TRIM39-203ENST00000396547 IMPACTQ9P2X3 320 aa11.37□□□□□ -0.59
TRIM39-203ENST00000396547 CICQ96RK0 1608 aaPredicted RBP11.37□□□□□ -0.59
TRIM39-203ENST00000396547 ADAMTS7Q9UKP4 1686 aa11.37□□□□□ -0.59
TRIM39-203ENST00000396547 TUBGCP6Q96RT7 1819 aa11.37□□□□□ -0.59
TRIM39-203ENST00000396547 KDRP35968 1356 aa11.36□□□□□ -0.59
TRIM39-203ENST00000396547 ALDH1L1O75891 902 aa11.36□□□□□ -0.59
TRIM39-203ENST00000396547 CASQ1P31415 396 aa11.36□□□□□ -0.59
TRIM39-203ENST00000396547 MTX1Q13505 466 aa11.36□□□□□ -0.59
TRIM39-203ENST00000396547 C1orf141Q5JVX7 400 aa11.36□□□□□ -0.59
TRIM39-203ENST00000396547 FEZ2Q9UHY8 353 aaPredicted RBP11.36□□□□□ -0.59
TRIM39-203ENST00000396547 PSDA5PKW4 1024 aaPredicted RBP11.36□□□□□ -0.59
TRIM39-203ENST00000396547 CPLX1O14810 134 aa11.36□□□□□ -0.59
TRIM39-203ENST00000396547 ADKP55263 362 aaKnown RBP11.36□□□□□ -0.59
TRIM39-203ENST00000396547 TIMM10P62072 90 aa11.36□□□□□ -0.59
TRIM39-203ENST00000396547 GPS2Q13227 327 aa11.36□□□□□ -0.59
TRIM39-203ENST00000396547 SPECC1Q5M775 1068 aa11.36□□□□□ -0.59
TRIM39-203ENST00000396547 NAA16Q6N069 864 aaPredicted RBP11.36□□□□□ -0.59
TRIM39-203ENST00000396547 LINS1Q8NG48 757 aa11.36□□□□□ -0.59
TRIM39-203ENST00000396547 RSPH14Q9UHP6 348 aa11.36□□□□□ -0.59
TRIM39-203ENST00000396547 LCMT1Q9UIC8 334 aa11.36□□□□□ -0.59
TRIM39-203ENST00000396547 ANKRD65E5RJM6 399 aa11.36□□□□□ -0.59
TRIM39-203ENST00000396547 FANCGO15287 622 aa11.36□□□□□ -0.59
TRIM39-203ENST00000396547 NEXNQ0ZGT2 675 aa11.36□□□□□ -0.59
TRIM39-203ENST00000396547 ZSCAN26Q16670 478 aa11.36□□□□□ -0.59
TRIM39-203ENST00000396547 ADALQ6DHV7 355 aa11.36□□□□□ -0.59
TRIM39-203ENST00000396547 UBE3BQ7Z3V4 1068 aa11.36□□□□□ -0.59
TRIM39-203ENST00000396547 SMARCC2Q8TAQ2 1214 aa11.36□□□□□ -0.59
TRIM39-203ENST00000396547 CPLX3Q8WVH0 158 aa11.36□□□□□ -0.59
TRIM39-203ENST00000396547 WDR24Q96S15 920 aa11.36□□□□□ -0.59
TRIM39-203ENST00000396547 IRX2Q9BZI1 471 aaPredicted RBP11.36□□□□□ -0.59
TRIM39-203ENST00000396547 SNRKQ9NRH2 765 aa11.36□□□□□ -0.59
TRIM39-203ENST00000396547 PUF60Q9UHX1 559 aaKnown RBP11.36□□□□□ -0.59
TRIM39-203ENST00000396547 HDAC5Q9UQL6 1122 aa11.36□□□□□ -0.59
TRIM39-203ENST00000396547 MED23Q9ULK4 1368 aa11.35□□□□□ -0.59
TRIM39-203ENST00000396547 PHACTR2O75167 634 aa11.35□□□□□ -0.59
TRIM39-203ENST00000396547 DDX58O95786 925 aaKnown RBP11.35□□□□□ -0.59
TRIM39-203ENST00000396547 RXRAP19793 462 aa11.35□□□□□ -0.59
TRIM39-203ENST00000396547 PDIA3P30101 505 aaKnown RBP11.35□□□□□ -0.59
TRIM39-203ENST00000396547 PNOCQ13519 176 aa11.35□□□□□ -0.59
TRIM39-203ENST00000396547 NLRP12P59046 1061 aa11.35□□□□□ -0.59
TRIM39-203ENST00000396547 LINC00301Q8NCQ3 95 aa11.35□□□□□ -0.59
TRIM39-203ENST00000396547 ARFGAP3Q9NP61 516 aa11.35□□□□□ -0.59
TRIM39-203ENST00000396547 FANCLQ9NW38 375 aa11.35□□□□□ -0.59
TRIM39-203ENST00000396547 E7EWF7 191 aa11.34□□□□□ -0.59
TRIM39-203ENST00000396547 TADA3O75528 432 aa11.34□□□□□ -0.59
TRIM39-203ENST00000396547 PFKFB1P16118 471 aa11.34□□□□□ -0.59
TRIM39-203ENST00000396547 BRD2P25440 801 aaKnown RBP11.34□□□□□ -0.59
TRIM39-203ENST00000396547 TNNI3KQ59H18 835 aa11.34□□□□□ -0.59
TRIM39-203ENST00000396547 AIFM3Q96NN9 605 aa11.34□□□□□ -0.59
TRIM39-203ENST00000396547 FPGT-TNNI3KV9GXZ4 949 aa11.34□□□□□ -0.59
TRIM39-203ENST00000396547 ZRANB2O95218 330 aaKnown RBP eCLIP11.34□□□□□ -0.59
TRIM39-203ENST00000396547 IGKV5-2P06315 115 aa11.34□□□□□ -0.59
TRIM39-203ENST00000396547 PPP2R3AQ06190 1150 aa11.34□□□□□ -0.59
TRIM39-203ENST00000396547 LRRFIP1Q32MZ4 808 aaKnown RBP11.34□□□□□ -0.59
TRIM39-203ENST00000396547 WWC2Q6AWC2 1192 aa11.34□□□□□ -0.59
TRIM39-203ENST00000396547 TRIM65Q6PJ69 517 aa11.34□□□□□ -0.59
TRIM39-203ENST00000396547 COPS6Q7L5N1 327 aa11.34□□□□□ -0.59
TRIM39-203ENST00000396547 TXLNBQ8N3L3 684 aa11.34□□□□□ -0.59
TRIM39-203ENST00000396547 XAGE3Q8WTP9 111 aa11.34□□□□□ -0.59
TRIM39-203ENST00000396547 CLIC6Q96NY7 704 aa11.34□□□□□ -0.59
TRIM39-203ENST00000396547 PARD6BQ9BYG5 372 aa11.34□□□□□ -0.59
TRIM39-203ENST00000396547 LZTFL1Q9NQ48 299 aa11.34□□□□□ -0.59
TRIM39-203ENST00000396547 TBC1D8O95759 1140 aa11.34□□□□□ -0.59
TRIM39-203ENST00000396547 FDPSP14324 419 aaKnown RBP11.34□□□□□ -0.59
TRIM39-203ENST00000396547 ATP2B1P20020 1258 aa11.34□□□□□ -0.59
TRIM39-203ENST00000396547 FKBP4Q02790 459 aaKnown RBP eCLIP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms