RNA–Protein interactions for RNA: ENST00000396081.5

HERPUD2-202, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 3,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-202ENST00000396081 BAG1Q99933 345 aaPredicted RBP20.96■□□□□ 0.95
HERPUD2-202ENST00000396081 MROH7-TTC4A0A0A0MT08 1334 aa20.95■□□□□ 0.95
HERPUD2-202ENST00000396081 LMOD2Q6P5Q4 547 aa20.95■□□□□ 0.94
HERPUD2-202ENST00000396081 VSTM4Q8IW00 320 aa20.95■□□□□ 0.94
HERPUD2-202ENST00000396081 MPHOSPH8Q99549 860 aa20.95■□□□□ 0.94
HERPUD2-202ENST00000396081 PIK3C2AO00443 1686 aa20.95■□□□□ 0.94
HERPUD2-202ENST00000396081 TRIM66O15016 1216 aa20.95■□□□□ 0.94
HERPUD2-202ENST00000396081 ARHGAP6O43182 974 aa20.95■□□□□ 0.94
HERPUD2-202ENST00000396081 CMA1P23946 247 aa20.95■□□□□ 0.94
HERPUD2-202ENST00000396081 DSCC1Q9BVC3 393 aa20.95■□□□□ 0.94
HERPUD2-202ENST00000396081 MCM6Q14566 821 aa20.94■□□□□ 0.94
HERPUD2-202ENST00000396081 AXDND1Q5T1B0 1012 aaPredicted RBP20.94■□□□□ 0.94
HERPUD2-202ENST00000396081 CCDC12Q8WUD4 166 aaPredicted RBP20.94■□□□□ 0.94
HERPUD2-202ENST00000396081 PDIA6Q15084 440 aa20.94■□□□□ 0.94
HERPUD2-202ENST00000396081 A0A087WZG4 1122 aa20.93■□□□□ 0.94
HERPUD2-202ENST00000396081 SLC20A2Q08357 652 aa20.93■□□□□ 0.94
HERPUD2-202ENST00000396081 TOGARAM2Q6ZUX3 1019 aa20.93■□□□□ 0.94
HERPUD2-202ENST00000396081 DHX58Q96C10 678 aa20.93■□□□□ 0.94
HERPUD2-202ENST00000396081 AIFM3Q96NN9 605 aa20.93■□□□□ 0.94
HERPUD2-202ENST00000396081 AGXT2Q9BYV1 514 aa20.93■□□□□ 0.94
HERPUD2-202ENST00000396081 NCAPD2Q15021 1401 aa20.93■□□□□ 0.94
HERPUD2-202ENST00000396081 SH3TC1Q8TE82 1336 aa20.93■□□□□ 0.94
HERPUD2-202ENST00000396081 ATP8B1O43520 1251 aa20.93■□□□□ 0.94
HERPUD2-202ENST00000396081 WASHC4Q2M389 1173 aa20.93■□□□□ 0.94
HERPUD2-202ENST00000396081 CHMP4CQ96CF2 233 aa20.93■□□□□ 0.94
HERPUD2-202ENST00000396081 RBM33Q96EV2 1170 aaKnown RBP20.93■□□□□ 0.94
HERPUD2-202ENST00000396081 CLIC6Q96NY7 704 aa20.93■□□□□ 0.94
HERPUD2-202ENST00000396081 HELLSQ9NRZ9 838 aa20.93■□□□□ 0.94
HERPUD2-202ENST00000396081 RSPH14Q9UHP6 348 aa20.93■□□□□ 0.94
HERPUD2-202ENST00000396081 LCMT1Q9UIC8 334 aa20.93■□□□□ 0.94
HERPUD2-202ENST00000396081 RFX5P48382 616 aaPredicted RBP20.93■□□□□ 0.94
HERPUD2-202ENST00000396081 CEBPAP49715 358 aaPredicted RBP20.93■□□□□ 0.94
HERPUD2-202ENST00000396081 LMBR1LQ6UX01 489 aa20.93■□□□□ 0.94
HERPUD2-202ENST00000396081 BRAPQ7Z569 592 aa20.93■□□□□ 0.94
HERPUD2-202ENST00000396081 STK11IPQ8N1F8 1099 aa20.93■□□□□ 0.94
HERPUD2-202ENST00000396081 METTL22Q9BUU2 404 aaPredicted RBP20.93■□□□□ 0.94
HERPUD2-202ENST00000396081 ADAM21Q9UKJ8 722 aa20.93■□□□□ 0.94
HERPUD2-202ENST00000396081 DHX16O60231 1041 aaKnown RBP20.92■□□□□ 0.94
HERPUD2-202ENST00000396081 AMOTQ4VCS5 1084 aa20.92■□□□□ 0.94
HERPUD2-202ENST00000396081 HSP90AB3PQ58FF7 597 aa20.92■□□□□ 0.94
HERPUD2-202ENST00000396081 ANKRD13DQ6ZTN6 518 aa20.92■□□□□ 0.94
HERPUD2-202ENST00000396081 RASSF4Q9H2L5 321 aa20.92■□□□□ 0.94
HERPUD2-202ENST00000396081 PUF60Q9UHX1 559 aaKnown RBP20.92■□□□□ 0.94
HERPUD2-202ENST00000396081 DIP2BQ9P265 1576 aa20.92■□□□□ 0.94
HERPUD2-202ENST00000396081 PRC1O43663 620 aa20.92■□□□□ 0.94
HERPUD2-202ENST00000396081 MAP3K9P80192 1104 aa20.92■□□□□ 0.94
HERPUD2-202ENST00000396081 FKBP4Q02790 459 aaKnown RBP eCLIP20.92■□□□□ 0.94
HERPUD2-202ENST00000396081 IRX2Q9BZI1 471 aaPredicted RBP20.92■□□□□ 0.94
HERPUD2-202ENST00000396081 CWC15Q9P013 229 aaKnown RBP20.92■□□□□ 0.94
HERPUD2-202ENST00000396081 MAST3O60307 1309 aa20.91■□□□□ 0.94
HERPUD2-202ENST00000396081 LONRF2Q1L5Z9 754 aa20.91■□□□□ 0.94
HERPUD2-202ENST00000396081 GOLGA1Q92805 767 aa20.91■□□□□ 0.94
HERPUD2-202ENST00000396081 RGPD8O14715 1765 aaPredicted RBP20.91■□□□□ 0.94
HERPUD2-202ENST00000396081 SPECC1Q5M775 1068 aa20.91■□□□□ 0.94
HERPUD2-202ENST00000396081 NFATC2IPQ8NCF5 419 aa20.91■□□□□ 0.94
HERPUD2-202ENST00000396081 FUT8Q9BYC5 575 aa20.91■□□□□ 0.94
HERPUD2-202ENST00000396081 MRFAP1Q9Y605 127 aa20.91■□□□□ 0.94
HERPUD2-202ENST00000396081 MYO1CO00159 1063 aa20.91■□□□□ 0.94
HERPUD2-202ENST00000396081 RXRAP19793 462 aa20.91■□□□□ 0.94
HERPUD2-202ENST00000396081 KIF23Q02241 960 aaPredicted RBP20.91■□□□□ 0.94
HERPUD2-202ENST00000396081 ZMYM1Q5SVZ6 1142 aa20.91■□□□□ 0.94
HERPUD2-202ENST00000396081 CERS3Q8IU89 383 aa20.91■□□□□ 0.94
HERPUD2-202ENST00000396081 LZTFL1Q9NQ48 299 aa20.91■□□□□ 0.94
HERPUD2-202ENST00000396081 VPS18Q9P253 973 aa20.91■□□□□ 0.94
HERPUD2-202ENST00000396081 H3BQF6 201 aa20.9■□□□□ 0.94
HERPUD2-202ENST00000396081 IFIT1P09914 478 aaKnown RBP20.9■□□□□ 0.94
HERPUD2-202ENST00000396081 MUM1L1Q5H9M0 696 aa20.9■□□□□ 0.94
HERPUD2-202ENST00000396081 CNNM3Q8NE01 707 aa20.9■□□□□ 0.94
HERPUD2-202ENST00000396081 PLEKHG1Q9ULL1 1385 aa20.9■□□□□ 0.94
HERPUD2-202ENST00000396081 M0R2C6 588 aa20.89■□□□□ 0.94
HERPUD2-202ENST00000396081 SLC39A14Q15043 492 aa20.89■□□□□ 0.94
HERPUD2-202ENST00000396081 RALYLQ86SE5 291 aaKnown RBP20.89■□□□□ 0.94
HERPUD2-202ENST00000396081 RABGGTAQ92696 567 aa20.89■□□□□ 0.94
HERPUD2-202ENST00000396081 UBXN6Q9BZV1 441 aa20.89■□□□□ 0.94
HERPUD2-202ENST00000396081 PCDHA5Q9Y5H7 936 aa20.89■□□□□ 0.94
HERPUD2-202ENST00000396081 TRMT44Q8IYL2 757 aaKnown RBP20.89■□□□□ 0.93
HERPUD2-202ENST00000396081 RNF113AO15541 343 aaKnown RBP20.89■□□□□ 0.93
HERPUD2-202ENST00000396081 SHC4Q6S5L8 630 aa20.89■□□□□ 0.93
HERPUD2-202ENST00000396081 TMEM139Q8IV31 216 aa20.89■□□□□ 0.93
HERPUD2-202ENST00000396081 INTS13Q9NVM9 706 aa20.89■□□□□ 0.93
HERPUD2-202ENST00000396081 FOXN1O15353 648 aa20.88■□□□□ 0.93
HERPUD2-202ENST00000396081 PDE4BQ07343 736 aa20.88■□□□□ 0.93
HERPUD2-202ENST00000396081 FCHSD1Q86WN1 690 aa20.88■□□□□ 0.93
HERPUD2-202ENST00000396081 PDE11AQ9HCR9 933 aa20.88■□□□□ 0.93
HERPUD2-202ENST00000396081 TUBE1Q9UJT0 475 aa20.88■□□□□ 0.93
HERPUD2-202ENST00000396081 AGLP35573 1532 aa20.88■□□□□ 0.93
HERPUD2-202ENST00000396081 MTF1Q14872 753 aa20.88■□□□□ 0.93
HERPUD2-202ENST00000396081 IMMTQ16891 758 aaKnown RBP20.88■□□□□ 0.93
HERPUD2-202ENST00000396081 LONRF3Q496Y0 759 aa20.88■□□□□ 0.93
HERPUD2-202ENST00000396081 CPLX3Q8WVH0 158 aa20.88■□□□□ 0.93
HERPUD2-202ENST00000396081 GOLGA6L9A6NEM1 432 aa20.87■□□□□ 0.93
HERPUD2-202ENST00000396081 ZNF827Q17R98 1081 aa20.87■□□□□ 0.93
HERPUD2-202ENST00000396081 CCDC102BQ68D86 513 aa20.87■□□□□ 0.93
HERPUD2-202ENST00000396081 RSRC2Q7L4I2 434 aaKnown RBP20.87■□□□□ 0.93
HERPUD2-202ENST00000396081 JMYQ8N9B5 988 aa20.87■□□□□ 0.93
HERPUD2-202ENST00000396081 ALG1Q9BT22 464 aa20.87■□□□□ 0.93
HERPUD2-202ENST00000396081 PHF8Q9UPP1 1060 aa20.87■□□□□ 0.93
HERPUD2-202ENST00000396081 ANKARQ7Z5J8 1434 aa20.87■□□□□ 0.93
HERPUD2-202ENST00000396081 PXDNQ92626 1479 aa20.87■□□□□ 0.93
HERPUD2-202ENST00000396081 CDC27P30260 824 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms