RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 EZRP15311 586 aaKnown RBP11.09□□□□□ -0.63
CDRT1-204ENST00000395906 SNX1Q13596 522 aa11.09□□□□□ -0.63
CDRT1-204ENST00000395906 SKIDA1Q1XH10 827 aa11.09□□□□□ -0.63
CDRT1-204ENST00000395906 SULT6B1Q6IMI4 303 aa11.09□□□□□ -0.63
CDRT1-204ENST00000395906 TSHZ1Q6ZSZ6 1077 aa11.09□□□□□ -0.63
CDRT1-204ENST00000395906 ARMCX6Q7L4S7 300 aa11.09□□□□□ -0.63
CDRT1-204ENST00000395906 CADPS2Q86UW7 1296 aa11.09□□□□□ -0.63
CDRT1-204ENST00000395906 C3orf20Q8ND61 904 aa11.09□□□□□ -0.63
CDRT1-204ENST00000395906 BATF3Q9NR55 127 aa11.09□□□□□ -0.63
CDRT1-204ENST00000395906 KLC4Q9NSK0 619 aa11.09□□□□□ -0.63
CDRT1-204ENST00000395906 MYO6Q9UM54 1294 aa11.09□□□□□ -0.63
CDRT1-204ENST00000395906 CHMP3Q9Y3E7 222 aa11.09□□□□□ -0.63
CDRT1-204ENST00000395906 FANCGO15287 622 aa11.08□□□□□ -0.64
CDRT1-204ENST00000395906 PHACTR2O75167 634 aa11.08□□□□□ -0.64
CDRT1-204ENST00000395906 CEP85LQ5SZL2 805 aa11.08□□□□□ -0.64
CDRT1-204ENST00000395906 MAB21L3Q8N8X9 362 aa11.08□□□□□ -0.64
CDRT1-204ENST00000395906 DCTPP1Q9H773 170 aa11.08□□□□□ -0.64
CDRT1-204ENST00000395906 ATP6V0A4Q9HBG4 840 aa11.08□□□□□ -0.64
CDRT1-204ENST00000395906 SLAIN2Q9P270 581 aa11.08□□□□□ -0.64
CDRT1-204ENST00000395906 PALD1Q9ULE6 856 aa11.08□□□□□ -0.64
CDRT1-204ENST00000395906 ANKARQ7Z5J8 1434 aa11.08□□□□□ -0.64
CDRT1-204ENST00000395906 SHTN1A0MZ66 631 aa11.08□□□□□ -0.64
CDRT1-204ENST00000395906 FRMD3A2A2Y4 597 aa11.08□□□□□ -0.64
CDRT1-204ENST00000395906 BECN2A8MW95 431 aa11.08□□□□□ -0.64
CDRT1-204ENST00000395906 EPB41L2O43491 1005 aaKnown RBP11.08□□□□□ -0.64
CDRT1-204ENST00000395906 RNF40O75150 1001 aa11.08□□□□□ -0.64
CDRT1-204ENST00000395906 CDKL5O76039 1030 aa11.08□□□□□ -0.64
CDRT1-204ENST00000395906 IMPDH2P12268 514 aa11.08□□□□□ -0.64
CDRT1-204ENST00000395906 NAP1L1P55209 391 aaKnown RBP11.08□□□□□ -0.64
CDRT1-204ENST00000395906 KRT85P78386 507 aa11.08□□□□□ -0.64
CDRT1-204ENST00000395906 PDIA5Q14554 519 aa11.08□□□□□ -0.64
CDRT1-204ENST00000395906 CASP8Q14790 479 aa11.08□□□□□ -0.64
CDRT1-204ENST00000395906 FILIP1LQ4L180 1135 aa11.08□□□□□ -0.64
CDRT1-204ENST00000395906 ARMCX5Q6P1M9 558 aa11.08□□□□□ -0.64
CDRT1-204ENST00000395906 TTC6Q86TZ1 520 aa11.08□□□□□ -0.64
CDRT1-204ENST00000395906 C16orf71Q8IYS4 520 aaPredicted RBP11.08□□□□□ -0.64
CDRT1-204ENST00000395906 MAGEC3Q8TD91 643 aa11.08□□□□□ -0.64
CDRT1-204ENST00000395906 CCDC97Q96F63 343 aaPredicted RBP11.08□□□□□ -0.64
CDRT1-204ENST00000395906 PLEKHF1Q96S99 279 aa11.08□□□□□ -0.64
CDRT1-204ENST00000395906 GBP3Q9H0R5 595 aa11.08□□□□□ -0.64
CDRT1-204ENST00000395906 OVOS2A0A0J9YW53 1432 aa11.08□□□□□ -0.64
CDRT1-204ENST00000395906 OVOS2Q6IE36 1432 aa11.08□□□□□ -0.64
CDRT1-204ENST00000395906 TTC21AQ8NDW8 1320 aa11.07□□□□□ -0.64
CDRT1-204ENST00000395906 SKAP2O75563 359 aaPredicted RBP11.07□□□□□ -0.64
CDRT1-204ENST00000395906 KIAA0754O94854 1291 aa11.07□□□□□ -0.64
CDRT1-204ENST00000395906 BRINP3Q76B58 766 aa11.07□□□□□ -0.64
CDRT1-204ENST00000395906 NCAPG2Q86XI2 1143 aa11.07□□□□□ -0.64
CDRT1-204ENST00000395906 CERKQ8TCT0 537 aa11.07□□□□□ -0.64
CDRT1-204ENST00000395906 SPDL1Q96EA4 605 aa11.07□□□□□ -0.64
CDRT1-204ENST00000395906 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.07□□□□□ -0.64
CDRT1-204ENST00000395906 DDX20Q9UHI6 824 aaKnown RBP11.07□□□□□ -0.64
CDRT1-204ENST00000395906 ZNF232Q9UNY5 417 aa11.07□□□□□ -0.64
CDRT1-204ENST00000395906 PCDHGA4Q9Y5G9 962 aa11.07□□□□□ -0.64
CDRT1-204ENST00000395906 PNPLA6Q8IY17 1366 aa11.07□□□□□ -0.64
CDRT1-204ENST00000395906 FAM83GA6ND36 823 aa11.07□□□□□ -0.64
CDRT1-204ENST00000395906 GOLGA6L4A6NEF3 574 aa11.07□□□□□ -0.64
CDRT1-204ENST00000395906 CD151P48509 253 aa11.07□□□□□ -0.64
CDRT1-204ENST00000395906 SMTNP53814 917 aa11.07□□□□□ -0.64
CDRT1-204ENST00000395906 TUBB4BP68371 445 aa11.07□□□□□ -0.64
CDRT1-204ENST00000395906 DCTN1Q14203 1278 aa11.07□□□□□ -0.64
CDRT1-204ENST00000395906 ARMC3Q5W041 872 aa11.07□□□□□ -0.64
CDRT1-204ENST00000395906 RINLQ6ZS11 566 aa11.07□□□□□ -0.64
CDRT1-204ENST00000395906 SPATS2Q86XZ4 545 aaKnown RBP11.07□□□□□ -0.64
CDRT1-204ENST00000395906 CCDC50Q8IVM0 306 aa11.07□□□□□ -0.64
CDRT1-204ENST00000395906 SPDYE1Q8NFV5 336 aaPredicted RBP11.07□□□□□ -0.64
CDRT1-204ENST00000395906 STK31Q9BXU1 1019 aa11.07□□□□□ -0.64
CDRT1-204ENST00000395906 MTMR6Q9Y217 621 aa11.07□□□□□ -0.64
CDRT1-204ENST00000395906 NPHP3Q7Z494 1330 aa11.06□□□□□ -0.64
CDRT1-204ENST00000395906 PEX19P40855 299 aa11.06□□□□□ -0.64
CDRT1-204ENST00000395906 STX1AQ16623 288 aa11.06□□□□□ -0.64
CDRT1-204ENST00000395906 B4GALNT4Q76KP1 1039 aa11.06□□□□□ -0.64
CDRT1-204ENST00000395906 MSANTD4Q8NCY6 345 aa11.06□□□□□ -0.64
CDRT1-204ENST00000395906 NAT10Q9H0A0 1025 aaKnown RBP11.06□□□□□ -0.64
CDRT1-204ENST00000395906 ABCB6Q9NP58 842 aa11.06□□□□□ -0.64
CDRT1-204ENST00000395906 COL3A1P02461 1466 aaPredicted RBP11.06□□□□□ -0.64
CDRT1-204ENST00000395906 MST1RQ04912 1400 aa11.06□□□□□ -0.64
CDRT1-204ENST00000395906 RTN3O95197 1032 aaPredicted RBP11.06□□□□□ -0.64
CDRT1-204ENST00000395906 GCP02774 474 aa11.06□□□□□ -0.64
CDRT1-204ENST00000395906 ARHGAP25P42331 645 aa11.06□□□□□ -0.64
CDRT1-204ENST00000395906 AARSP49588 968 aaKnown RBP eCLIP11.06□□□□□ -0.64
CDRT1-204ENST00000395906 RBM12BQ8IXT5 1001 aaKnown RBP11.06□□□□□ -0.64
CDRT1-204ENST00000395906 OR8K1Q8NGG5 319 aa11.06□□□□□ -0.64
CDRT1-204ENST00000395906 MMTAG2Q9BU76 263 aaKnown RBP11.06□□□□□ -0.64
CDRT1-204ENST00000395906 UPF3BQ9BZI7 483 aaKnown RBP11.06□□□□□ -0.64
CDRT1-204ENST00000395906 ANKZF1Q9H8Y5 726 aa11.06□□□□□ -0.64
CDRT1-204ENST00000395906 PIK3C2AO00443 1686 aa11.05□□□□□ -0.64
CDRT1-204ENST00000395906 LRRC7Q96NW7 1537 aa11.05□□□□□ -0.64
CDRT1-204ENST00000395906 ZSCAN12O43309 604 aa11.05□□□□□ -0.64
CDRT1-204ENST00000395906 PRPF6O94906 941 aaKnown RBP11.05□□□□□ -0.64
CDRT1-204ENST00000395906 ECEL1O95672 775 aa11.05□□□□□ -0.64
CDRT1-204ENST00000395906 GBP2P32456 591 aaPredicted RBP11.05□□□□□ -0.64
CDRT1-204ENST00000395906 TMPOP42166 694 aaKnown RBP11.05□□□□□ -0.64
CDRT1-204ENST00000395906 PLCB4Q15147 1175 aa11.05□□□□□ -0.64
CDRT1-204ENST00000395906 HHATQ5VTY9 493 aa11.05□□□□□ -0.64
CDRT1-204ENST00000395906 C11orf57Q6ZUT1 292 aaPredicted RBP11.05□□□□□ -0.64
CDRT1-204ENST00000395906 FCHSD1Q86WN1 690 aa11.05□□□□□ -0.64
CDRT1-204ENST00000395906 LMBR1Q8WVP7 490 aa11.05□□□□□ -0.64
CDRT1-204ENST00000395906 SMARCC1Q92922 1105 aaPredicted RBP11.05□□□□□ -0.64
CDRT1-204ENST00000395906 TSPAN18Q96SJ8 248 aa11.05□□□□□ -0.64
CDRT1-204ENST00000395906 ESYT1Q9BSJ8 1104 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms