RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 CYP7A1P22680 504 aa16.39■□□□□ 0.21
VAPB-202ENST00000395802 NLGN2Q8NFZ4 835 aa16.39■□□□□ 0.21
VAPB-202ENST00000395802 JDP2Q8WYK2 163 aa16.39■□□□□ 0.21
VAPB-202ENST00000395802 MAP4K1Q92918 833 aa16.39■□□□□ 0.21
VAPB-202ENST00000395802 NOL10Q9BSC4 688 aaKnown RBP16.39■□□□□ 0.21
VAPB-202ENST00000395802 DBNDD1Q9H9R9 158 aa16.39■□□□□ 0.21
VAPB-202ENST00000395802 GPAA1O43292 621 aa16.38■□□□□ 0.21
VAPB-202ENST00000395802 ZKSCAN1P17029 563 aaPredicted RBP16.38■□□□□ 0.21
VAPB-202ENST00000395802 IARSP41252 1262 aaKnown RBP16.38■□□□□ 0.21
VAPB-202ENST00000395802 MECOMQ03112 1051 aa16.38■□□□□ 0.21
VAPB-202ENST00000395802 ZNF589Q86UQ0 364 aaPredicted RBP16.38■□□□□ 0.21
VAPB-202ENST00000395802 FBXW7Q969H0 707 aa16.38■□□□□ 0.21
VAPB-202ENST00000395802 SYT17Q9BSW7 474 aa16.38■□□□□ 0.21
VAPB-202ENST00000395802 PUS7LQ9H0K6 701 aaKnown RBP16.38■□□□□ 0.21
VAPB-202ENST00000395802 IL25Q9H293 177 aa16.38■□□□□ 0.21
VAPB-202ENST00000395802 CTNNA3Q9UI47 895 aa16.38■□□□□ 0.21
VAPB-202ENST00000395802 U3KPZ7 1027 aaPredicted RBP16.38■□□□□ 0.21
VAPB-202ENST00000395802 USP17L3A6NCW0 530 aa16.38■□□□□ 0.21
VAPB-202ENST00000395802 USP17L4A6NCW7 530 aa16.38■□□□□ 0.21
VAPB-202ENST00000395802 BAG3O95817 575 aa16.38■□□□□ 0.21
VAPB-202ENST00000395802 PRDX5P30044 214 aa16.38■□□□□ 0.21
VAPB-202ENST00000395802 HSPA4P34932 840 aa16.38■□□□□ 0.21
VAPB-202ENST00000395802 USP17L1Q7RTZ2 530 aa16.38■□□□□ 0.21
VAPB-202ENST00000395802 NIM1KQ8IY84 436 aa16.38■□□□□ 0.21
VAPB-202ENST00000395802 DDRGK1Q96HY6 314 aa16.38■□□□□ 0.21
VAPB-202ENST00000395802 SEC62Q99442 399 aaKnown RBP16.38■□□□□ 0.21
VAPB-202ENST00000395802 JAG2Q9Y219 1238 aa16.38■□□□□ 0.21
VAPB-202ENST00000395802 RPAP1Q9BWH6 1393 aaPredicted RBP16.37■□□□□ 0.21
VAPB-202ENST00000395802 MYO3BQ8WXR4 1341 aa16.37■□□□□ 0.21
VAPB-202ENST00000395802 NACAP1Q9BZK3 213 aa16.37■□□□□ 0.21
VAPB-202ENST00000395802 ZNF277Q9NRM2 450 aaPredicted RBP16.37■□□□□ 0.21
VAPB-202ENST00000395802 CCDC88AQ3V6T2 1871 aa16.37■□□□□ 0.21
VAPB-202ENST00000395802 GOLGB1Q14789 3259 aaKnown RBP16.37■□□□□ 0.21
VAPB-202ENST00000395802 MAGEB6P1A0A0J9YX57 407 aa16.36■□□□□ 0.21
VAPB-202ENST00000395802 M0R2C6 588 aa16.36■□□□□ 0.21
VAPB-202ENST00000395802 HSPD1P10809 573 aaKnown RBP16.36■□□□□ 0.21
VAPB-202ENST00000395802 ZNRF3Q9ULT6 936 aa16.36■□□□□ 0.21
VAPB-202ENST00000395802 ARFGEF1Q9Y6D6 1849 aa16.36■□□□□ 0.21
VAPB-202ENST00000395802 CCDC129Q6ZRS4 1044 aa16.35■□□□□ 0.21
VAPB-202ENST00000395802 CHGBP05060 677 aa16.35■□□□□ 0.21
VAPB-202ENST00000395802 PLCG2P16885 1265 aa16.35■□□□□ 0.21
VAPB-202ENST00000395802 PTH1RQ03431 593 aa16.35■□□□□ 0.21
VAPB-202ENST00000395802 FAM163AQ96GL9 167 aaPredicted RBP16.35■□□□□ 0.21
VAPB-202ENST00000395802 STRBPQ96SI9 672 aaKnown RBP16.35■□□□□ 0.21
VAPB-202ENST00000395802 MRIQ9BWK5 157 aa16.35■□□□□ 0.21
VAPB-202ENST00000395802 RBM8AQ9Y5S9 174 aaKnown RBP16.35■□□□□ 0.21
VAPB-202ENST00000395802 MAST2Q6P0Q8 1798 aa16.34■□□□□ 0.21
VAPB-202ENST00000395802 FER1L6Q2WGJ9 1857 aa16.34■□□□□ 0.21
VAPB-202ENST00000395802 PATL2C9JE40 543 aaKnown RBP16.34■□□□□ 0.21
VAPB-202ENST00000395802 MBD4O95243 580 aa16.34■□□□□ 0.21
VAPB-202ENST00000395802 APPP05067 770 aa16.34■□□□□ 0.21
VAPB-202ENST00000395802 MMP14P50281 582 aa16.33■□□□□ 0.21
VAPB-202ENST00000395802 KRT32Q14532 448 aa16.33■□□□□ 0.21
VAPB-202ENST00000395802 NECTIN1Q15223 517 aa16.33■□□□□ 0.21
VAPB-202ENST00000395802 RABEP1Q15276 862 aa16.33■□□□□ 0.21
VAPB-202ENST00000395802 SLFNL1Q499Z3 407 aa16.33■□□□□ 0.21
VAPB-202ENST00000395802 MYO5AQ9Y4I1 1855 aaKnown RBP16.33■□□□□ 0.21
VAPB-202ENST00000395802 NFKBIEO00221 500 aa16.33■□□□□ 0.2
VAPB-202ENST00000395802 HDLBPQ00341 1268 aaKnown RBP16.33■□□□□ 0.2
VAPB-202ENST00000395802 DACT2Q5SW24 774 aa16.33■□□□□ 0.2
VAPB-202ENST00000395802 CRNKL1Q9BZJ0 848 aaKnown RBP16.33■□□□□ 0.2
VAPB-202ENST00000395802 TTF2Q9UNY4 1162 aaKnown RBP16.33■□□□□ 0.2
VAPB-202ENST00000395802 MROH7-TTC4A0A0A0MT08 1334 aa16.32■□□□□ 0.2
VAPB-202ENST00000395802 ZMYM6O95789 1325 aa16.32■□□□□ 0.2
VAPB-202ENST00000395802 PPP4CP60510 307 aa16.32■□□□□ 0.2
VAPB-202ENST00000395802 TNIP1Q15025 636 aa16.32■□□□□ 0.2
VAPB-202ENST00000395802 IMMTQ16891 758 aaKnown RBP16.32■□□□□ 0.2
VAPB-202ENST00000395802 GIMAP6Q6P9H5 292 aa16.32■□□□□ 0.2
VAPB-202ENST00000395802 MIGA1Q8NAN2 632 aa16.32■□□□□ 0.2
VAPB-202ENST00000395802 IL17RAQ96F46 866 aa16.32■□□□□ 0.2
VAPB-202ENST00000395802 SLC4A4Q9Y6R1 1079 aa16.32■□□□□ 0.2
VAPB-202ENST00000395802 CHD4Q14839 1912 aa16.32■□□□□ 0.2
VAPB-202ENST00000395802 PSMA5P28066 241 aa16.31■□□□□ 0.2
VAPB-202ENST00000395802 ALX1Q15699 326 aa16.31■□□□□ 0.2
VAPB-202ENST00000395802 TSGA10IPQ3SY00 556 aa16.31■□□□□ 0.2
VAPB-202ENST00000395802 CREB3L3Q68CJ9 461 aa16.31■□□□□ 0.2
VAPB-202ENST00000395802 HHIPL2Q6UWX4 724 aa16.31■□□□□ 0.2
VAPB-202ENST00000395802 KCNB2Q92953 911 aa16.31■□□□□ 0.2
VAPB-202ENST00000395802 TEKT1Q969V4 418 aa16.31■□□□□ 0.2
VAPB-202ENST00000395802 RIOK1Q9BRS2 568 aaKnown RBP16.31■□□□□ 0.2
VAPB-202ENST00000395802 ARMT1Q9H993 441 aa16.31■□□□□ 0.2
VAPB-202ENST00000395802 AATFQ9NY61 560 aaKnown RBP eCLIP16.31■□□□□ 0.2
VAPB-202ENST00000395802 GPR75-ASB3A0A0A6YYF3 556 aa16.31■□□□□ 0.2
VAPB-202ENST00000395802 VPS53Q5VIR6 699 aa16.31■□□□□ 0.2
VAPB-202ENST00000395802 ARHGAP27Q6ZUM4 889 aa16.31■□□□□ 0.2
VAPB-202ENST00000395802 ADGRA1Q86SQ6 560 aa16.31■□□□□ 0.2
VAPB-202ENST00000395802 LCORLQ8N3X6 602 aa16.31■□□□□ 0.2
VAPB-202ENST00000395802 ZNF384Q8TF68 577 aa16.31■□□□□ 0.2
VAPB-202ENST00000395802 NAPBQ9H115 298 aa16.31■□□□□ 0.2
VAPB-202ENST00000395802 ATP8A2Q9NTI2 1148 aa16.31■□□□□ 0.2
VAPB-202ENST00000395802 HDAC9Q9UKV0 1011 aa16.31■□□□□ 0.2
VAPB-202ENST00000395802 YDJCA8MPS7 323 aa16.3■□□□□ 0.2
VAPB-202ENST00000395802 ZNF213O14771 459 aa16.3■□□□□ 0.2
VAPB-202ENST00000395802 VIL1P09327 827 aaKnown RBP16.3■□□□□ 0.2
VAPB-202ENST00000395802 EIF6P56537 245 aaKnown RBP16.3■□□□□ 0.2
VAPB-202ENST00000395802 BECN1Q14457 450 aa16.3■□□□□ 0.2
VAPB-202ENST00000395802 RSBN1LQ6PCB5 846 aaPredicted RBP16.3■□□□□ 0.2
VAPB-202ENST00000395802 OGFOD1Q8N543 542 aa16.3■□□□□ 0.2
VAPB-202ENST00000395802 AGBL3Q8NEM8 1001 aa16.3■□□□□ 0.2
VAPB-202ENST00000395802 SERPINA10Q9UK55 444 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms