RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 TPM4P67936 248 aa16.73■□□□□ 0.27
SREBF1-205ENST00000395757 GIGYF2Q6Y7W6 1299 aaKnown RBP16.73■□□□□ 0.27
SREBF1-205ENST00000395757 MFSD6Q6ZSS7 791 aa16.73■□□□□ 0.27
SREBF1-205ENST00000395757 DSCC1Q9BVC3 393 aa16.73■□□□□ 0.27
SREBF1-205ENST00000395757 MED23Q9ULK4 1368 aa16.73■□□□□ 0.27
SREBF1-205ENST00000395757 NCAPD2Q15021 1401 aa16.73■□□□□ 0.27
SREBF1-205ENST00000395757 WTIPA6NIX2 430 aaPredicted RBP16.73■□□□□ 0.27
SREBF1-205ENST00000395757 PDE6AP16499 860 aa16.73■□□□□ 0.27
SREBF1-205ENST00000395757 NACAP1Q9BZK3 213 aa16.73■□□□□ 0.27
SREBF1-205ENST00000395757 GOLPH3LQ9H4A5 285 aa16.73■□□□□ 0.27
SREBF1-205ENST00000395757 PRDM4Q9UKN5 801 aa16.73■□□□□ 0.27
SREBF1-205ENST00000395757 PCDHA7Q9UN72 937 aa16.73■□□□□ 0.27
SREBF1-205ENST00000395757 EPB41L2O43491 1005 aaKnown RBP16.73■□□□□ 0.27
SREBF1-205ENST00000395757 NDUFA8P51970 172 aa16.73■□□□□ 0.27
SREBF1-205ENST00000395757 SART3Q15020 963 aaKnown RBP16.73■□□□□ 0.27
SREBF1-205ENST00000395757 CFAP100Q494V2 611 aa16.72■□□□□ 0.27
SREBF1-205ENST00000395757 UTYO14607 1347 aa16.72■□□□□ 0.27
SREBF1-205ENST00000395757 MAP3K15Q6ZN16 1313 aa16.72■□□□□ 0.27
SREBF1-205ENST00000395757 CTDNEP1O95476 244 aa16.72■□□□□ 0.27
SREBF1-205ENST00000395757 STX1AQ16623 288 aa16.72■□□□□ 0.27
SREBF1-205ENST00000395757 TEX13AQ9BXU3 409 aaPredicted RBP16.72■□□□□ 0.27
SREBF1-205ENST00000395757 ANO10Q9NW15 660 aa16.72■□□□□ 0.27
SREBF1-205ENST00000395757 TRIM22Q8IYM9 498 aa16.72■□□□□ 0.27
SREBF1-205ENST00000395757 STAMQ92783 540 aa16.72■□□□□ 0.27
SREBF1-205ENST00000395757 NRDCO43847 1150 aa16.71■□□□□ 0.27
SREBF1-205ENST00000395757 PCCAP05165 728 aaPredicted RBP16.71■□□□□ 0.27
SREBF1-205ENST00000395757 NAT10Q9H0A0 1025 aaKnown RBP16.71■□□□□ 0.27
SREBF1-205ENST00000395757 LTN1O94822 1766 aa16.71■□□□□ 0.27
SREBF1-205ENST00000395757 BAZ2BQ9UIF8 2168 aaKnown RBP16.71■□□□□ 0.27
SREBF1-205ENST00000395757 KCNQ2O43526 872 aa16.71■□□□□ 0.27
SREBF1-205ENST00000395757 ZFYP08048 801 aaPredicted RBP16.71■□□□□ 0.27
SREBF1-205ENST00000395757 CASP7P55210 303 aa16.71■□□□□ 0.27
SREBF1-205ENST00000395757 FAM98CQ17RN3 349 aaKnown RBP16.71■□□□□ 0.27
SREBF1-205ENST00000395757 HOMEZQ8IX15 550 aa16.71■□□□□ 0.27
SREBF1-205ENST00000395757 C8orf37Q96NL8 207 aa16.71■□□□□ 0.27
SREBF1-205ENST00000395757 GOLGA8FQ08AF8 430 aa16.71■□□□□ 0.26
SREBF1-205ENST00000395757 GOLGA8DPQ0D2H9 430 aa16.71■□□□□ 0.26
SREBF1-205ENST00000395757 TBC1D10CQ8IV04 446 aa16.71■□□□□ 0.26
SREBF1-205ENST00000395757 IFNKQ9P0W0 207 aa16.71■□□□□ 0.26
SREBF1-205ENST00000395757 TNS3Q68CZ2 1445 aa16.7■□□□□ 0.26
SREBF1-205ENST00000395757 SH3TC1Q8TE82 1336 aa16.7■□□□□ 0.26
SREBF1-205ENST00000395757 PDE8BO95263 885 aa16.7■□□□□ 0.26
SREBF1-205ENST00000395757 UTP14AQ9BVJ6 771 aaKnown RBP16.7■□□□□ 0.26
SREBF1-205ENST00000395757 FMN2Q9NZ56 1722 aa16.7■□□□□ 0.26
SREBF1-205ENST00000395757 PDE8AO60658 829 aa16.7■□□□□ 0.26
SREBF1-205ENST00000395757 SYKP43405 635 aa16.7■□□□□ 0.26
SREBF1-205ENST00000395757 AFMP43652 599 aa16.7■□□□□ 0.26
SREBF1-205ENST00000395757 HS1BP3Q53T59 392 aa16.7■□□□□ 0.26
SREBF1-205ENST00000395757 SUSD4Q5VX71 490 aa16.7■□□□□ 0.26
SREBF1-205ENST00000395757 CPLX3Q8WVH0 158 aa16.7■□□□□ 0.26
SREBF1-205ENST00000395757 NGLY1Q96IV0 654 aa16.7■□□□□ 0.26
SREBF1-205ENST00000395757 ANGEL1Q9UNK9 670 aaKnown RBP16.7■□□□□ 0.26
SREBF1-205ENST00000395757 SKILP12757 684 aa16.69■□□□□ 0.26
SREBF1-205ENST00000395757 ZNF827Q17R98 1081 aa16.69■□□□□ 0.26
SREBF1-205ENST00000395757 SPATA5Q8NB90 893 aa16.69■□□□□ 0.26
SREBF1-205ENST00000395757 CNNM3Q8NE01 707 aa16.69■□□□□ 0.26
SREBF1-205ENST00000395757 COBLO75128 1261 aa16.69■□□□□ 0.26
SREBF1-205ENST00000395757 SSRP1Q08945 709 aaKnown RBP16.69■□□□□ 0.26
SREBF1-205ENST00000395757 KRT40Q6A162 431 aa16.69■□□□□ 0.26
SREBF1-205ENST00000395757 CYB5R4Q7L1T6 521 aa16.69■□□□□ 0.26
SREBF1-205ENST00000395757 LRP10Q7Z4F1 713 aa16.69■□□□□ 0.26
SREBF1-205ENST00000395757 CARMIL3Q8ND23 1372 aa16.69■□□□□ 0.26
SREBF1-205ENST00000395757 ZNF500O60304 480 aaPredicted RBP16.69■□□□□ 0.26
SREBF1-205ENST00000395757 ZNF75DP51815 510 aa16.69■□□□□ 0.26
SREBF1-205ENST00000395757 WTAPQ15007 396 aa16.69■□□□□ 0.26
SREBF1-205ENST00000395757 TMEM87AQ8NBN3 555 aa16.69■□□□□ 0.26
SREBF1-205ENST00000395757 NFAT5O94916 1531 aa16.69■□□□□ 0.26
SREBF1-205ENST00000395757 FAM160A1Q05DH4 1040 aa16.68■□□□□ 0.26
SREBF1-205ENST00000395757 SMIM22K7EJ46 135 aa16.68■□□□□ 0.26
SREBF1-205ENST00000395757 RIOK3O14730 519 aaKnown RBP16.68■□□□□ 0.26
SREBF1-205ENST00000395757 RASGRF1Q13972 1273 aa16.68■□□□□ 0.26
SREBF1-205ENST00000395757 DPCR1Q3MIW9 517 aa16.68■□□□□ 0.26
SREBF1-205ENST00000395757 MYSM1Q5VVJ2 828 aa16.68■□□□□ 0.26
SREBF1-205ENST00000395757 OLFM4Q6UX06 510 aa16.68■□□□□ 0.26
SREBF1-205ENST00000395757 ISCA1Q9BUE6 129 aa16.68■□□□□ 0.26
SREBF1-205ENST00000395757 BTBD18B2RXH4 712 aa16.67■□□□□ 0.26
SREBF1-205ENST00000395757 STX17P56962 302 aa16.67■□□□□ 0.26
SREBF1-205ENST00000395757 DHX8Q14562 1220 aaKnown RBP16.67■□□□□ 0.26
SREBF1-205ENST00000395757 NAA30Q147X3 362 aaPredicted RBP16.67■□□□□ 0.26
SREBF1-205ENST00000395757 PUM3Q15397 648 aaKnown RBP16.67■□□□□ 0.26
SREBF1-205ENST00000395757 CCDC112Q8NEF3 446 aa16.67■□□□□ 0.26
SREBF1-205ENST00000395757 ZNF202O95125 648 aa16.67■□□□□ 0.26
SREBF1-205ENST00000395757 CRKLP46109 303 aaKnown RBP16.67■□□□□ 0.26
SREBF1-205ENST00000395757 PNOCQ13519 176 aa16.67■□□□□ 0.26
SREBF1-205ENST00000395757 TTF1Q15361 905 aaPredicted RBP16.67■□□□□ 0.26
SREBF1-205ENST00000395757 CCDC152Q4G0S7 254 aa16.67■□□□□ 0.26
SREBF1-205ENST00000395757 ANO1Q5XXA6 986 aa16.67■□□□□ 0.26
SREBF1-205ENST00000395757 CACTINQ8WUQ7 758 aaKnown RBP16.67■□□□□ 0.26
SREBF1-205ENST00000395757 RTN1Q16799 776 aa16.66■□□□□ 0.26
SREBF1-205ENST00000395757 LCORLQ8N3X6 602 aa16.66■□□□□ 0.26
SREBF1-205ENST00000395757 KIF28PB7ZC32 967 aa16.66■□□□□ 0.26
SREBF1-205ENST00000395757 CDKL5O76039 1030 aa16.66■□□□□ 0.26
SREBF1-205ENST00000395757 CNPY4Q8N129 248 aa16.66■□□□□ 0.26
SREBF1-205ENST00000395757 MST1RQ04912 1400 aa16.66■□□□□ 0.26
SREBF1-205ENST00000395757 FDPSP14324 419 aaKnown RBP16.66■□□□□ 0.26
SREBF1-205ENST00000395757 DYNLL1P63167 89 aaKnown RBP16.66■□□□□ 0.26
SREBF1-205ENST00000395757 TRMT44Q8IYL2 757 aaKnown RBP16.66■□□□□ 0.26
SREBF1-205ENST00000395757 GRAMD1CQ8IYS0 662 aa16.66■□□□□ 0.26
SREBF1-205ENST00000395757 IFNL3Q8IZI9 196 aa16.66■□□□□ 0.26
SREBF1-205ENST00000395757 FBXO18Q8NFZ0 1043 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms