RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 SMIM5Q71RC9 77 aa14.11□□□□□ -0.15
RTN1-203ENST00000395090 FCF1Q9Y324 198 aaKnown RBP14.11□□□□□ -0.15
RTN1-203ENST00000395090 SSFA2P28290 1259 aa14.1□□□□□ -0.15
RTN1-203ENST00000395090 SUSD4Q5VX71 490 aa14.1□□□□□ -0.15
RTN1-203ENST00000395090 PTCRAQ6ISU1 281 aaPredicted RBP14.1□□□□□ -0.15
RTN1-203ENST00000395090 FAM89AQ96GI7 184 aa14.1□□□□□ -0.15
RTN1-203ENST00000395090 ANKRD36CQ5JPF3 1778 aa14.1□□□□□ -0.15
RTN1-203ENST00000395090 RAB11FIP3O75154 756 aa14.09□□□□□ -0.15
RTN1-203ENST00000395090 FBXO45P0C2W1 286 aa14.09□□□□□ -0.15
RTN1-203ENST00000395090 SOX11P35716 441 aa14.09□□□□□ -0.15
RTN1-203ENST00000395090 USPL1Q5W0Q7 1092 aa14.09□□□□□ -0.15
RTN1-203ENST00000395090 ADAMTS19Q8TE59 1207 aa14.09□□□□□ -0.15
RTN1-203ENST00000395090 CAMKK2Q96RR4 588 aa14.09□□□□□ -0.15
RTN1-203ENST00000395090 TRMT112Q9UI30 125 aaKnown RBP14.09□□□□□ -0.15
RTN1-203ENST00000395090 USP42Q9H9J4 1324 aaKnown RBP14.09□□□□□ -0.15
RTN1-203ENST00000395090 TNS1Q9HBL0 1735 aaKnown RBP14.09□□□□□ -0.15
RTN1-203ENST00000395090 CSF1RP07333 972 aa14.08□□□□□ -0.15
RTN1-203ENST00000395090 RFC4P35249 363 aa14.08□□□□□ -0.15
RTN1-203ENST00000395090 RFX5P48382 616 aaPredicted RBP14.08□□□□□ -0.15
RTN1-203ENST00000395090 HSP90AB4PQ58FF6 505 aa14.08□□□□□ -0.15
RTN1-203ENST00000395090 PDXDC2PQ6P474 469 aa14.08□□□□□ -0.15
RTN1-203ENST00000395090 LMBR1LQ6UX01 489 aa14.08□□□□□ -0.15
RTN1-203ENST00000395090 UTP14AQ9BVJ6 771 aaKnown RBP14.08□□□□□ -0.15
RTN1-203ENST00000395090 SRP68Q9UHB9 627 aaKnown RBP14.08□□□□□ -0.15
RTN1-203ENST00000395090 NIP7Q9Y221 180 aaKnown RBP eCLIP14.08□□□□□ -0.15
RTN1-203ENST00000395090 EXOC6BQ9Y2D4 811 aa14.08□□□□□ -0.15
RTN1-203ENST00000395090 RGPD3A6NKT7 1758 aaPredicted RBP14.08□□□□□ -0.16
RTN1-203ENST00000395090 BCORQ6W2J9 1755 aa14.08□□□□□ -0.16
RTN1-203ENST00000395090 RGPD4Q7Z3J3 1758 aa14.08□□□□□ -0.16
RTN1-203ENST00000395090 SURF6O75683 361 aaKnown RBP14.08□□□□□ -0.16
RTN1-203ENST00000395090 HOMEZQ8IX15 550 aa14.08□□□□□ -0.16
RTN1-203ENST00000395090 SYNE4Q8N205 404 aa14.08□□□□□ -0.16
RTN1-203ENST00000395090 LNPKQ9C0E8 428 aa14.08□□□□□ -0.16
RTN1-203ENST00000395090 ALG2Q9H553 416 aa14.08□□□□□ -0.16
RTN1-203ENST00000395090 COPRSQ9NQ92 184 aa14.08□□□□□ -0.16
RTN1-203ENST00000395090 GPSM3Q9Y4H4 160 aa14.08□□□□□ -0.16
RTN1-203ENST00000395090 NTSR2O95665 410 aa14.07□□□□□ -0.16
RTN1-203ENST00000395090 TBC1D9BQ66K14 1250 aa14.07□□□□□ -0.16
RTN1-203ENST00000395090 SH3TC1Q8TE82 1336 aa14.07□□□□□ -0.16
RTN1-203ENST00000395090 UBR3Q6ZT12 1888 aa14.06□□□□□ -0.16
RTN1-203ENST00000395090 IRS4O14654 1257 aaPredicted RBP14.06□□□□□ -0.16
RTN1-203ENST00000395090 RGS3P49796 1198 aa14.06□□□□□ -0.16
RTN1-203ENST00000395090 PTK2Q05397 1052 aa14.06□□□□□ -0.16
RTN1-203ENST00000395090 LRRCC1Q9C099 1032 aa14.06□□□□□ -0.16
RTN1-203ENST00000395090 SCN7AQ01118 1682 aa14.05□□□□□ -0.16
RTN1-203ENST00000395090 PTPN12Q05209 780 aaKnown RBP14.05□□□□□ -0.16
RTN1-203ENST00000395090 SEMA3FQ13275 785 aa14.05□□□□□ -0.16
RTN1-203ENST00000395090 ZNF827Q17R98 1081 aa14.05□□□□□ -0.16
RTN1-203ENST00000395090 TTLL11Q8NHH1 800 aa14.05□□□□□ -0.16
RTN1-203ENST00000395090 SETDB2Q96T68 719 aa14.05□□□□□ -0.16
RTN1-203ENST00000395090 PDE8AO60658 829 aa14.04□□□□□ -0.16
RTN1-203ENST00000395090 HSP90B1P14625 803 aaKnown RBP14.04□□□□□ -0.16
RTN1-203ENST00000395090 GGCXP38435 758 aa14.04□□□□□ -0.16
RTN1-203ENST00000395090 MMRN1Q13201 1228 aa14.04□□□□□ -0.16
RTN1-203ENST00000395090 SLC10A5Q5PT55 438 aa14.04□□□□□ -0.16
RTN1-203ENST00000395090 CCDC125Q86Z20 511 aa14.04□□□□□ -0.16
RTN1-203ENST00000395090 FLAD1Q8NFF5 587 aa14.04□□□□□ -0.16
RTN1-203ENST00000395090 KIF1BPQ96EK5 621 aa14.04□□□□□ -0.16
RTN1-203ENST00000395090 PA2G4Q9UQ80 394 aaKnown RBP14.04□□□□□ -0.16
RTN1-203ENST00000395090 GYS1P13807 737 aa14.04□□□□□ -0.16
RTN1-203ENST00000395090 CTSWP56202 376 aa14.04□□□□□ -0.16
RTN1-203ENST00000395090 EZH2Q15910 746 aaKnown RBP14.04□□□□□ -0.16
RTN1-203ENST00000395090 ERC1Q8IUD2 1116 aa14.04□□□□□ -0.16
RTN1-203ENST00000395090 RHPN1Q8TCX5 695 aa14.04□□□□□ -0.16
RTN1-203ENST00000395090 TFCP2L1Q9NZI6 479 aa14.04□□□□□ -0.16
RTN1-203ENST00000395090 PPEF1O14829 653 aaPredicted RBP14.03□□□□□ -0.16
RTN1-203ENST00000395090 SMARCA5O60264 1052 aaPredicted RBP14.03□□□□□ -0.16
RTN1-203ENST00000395090 G3BP1Q13283 466 aaKnown RBP eCLIP14.03□□□□□ -0.16
RTN1-203ENST00000395090 PLEKHM2Q8IWE5 1019 aa14.03□□□□□ -0.16
RTN1-203ENST00000395090 C16orf71Q8IYS4 520 aaPredicted RBP14.03□□□□□ -0.16
RTN1-203ENST00000395090 C4AP0C0L4 1744 aa14.03□□□□□ -0.16
RTN1-203ENST00000395090 RNF223E7ERA6 249 aa14.02□□□□□ -0.16
RTN1-203ENST00000395090 SASH1O94885 1247 aa14.02□□□□□ -0.16
RTN1-203ENST00000395090 TM4SF1P30408 202 aa14.02□□□□□ -0.16
RTN1-203ENST00000395090 SF3B2Q13435 895 aaKnown RBP14.02□□□□□ -0.16
RTN1-203ENST00000395090 KLHDC4Q8TBB5 520 aa14.02□□□□□ -0.16
RTN1-203ENST00000395090 NYXQ9GZU5 481 aa14.02□□□□□ -0.16
RTN1-203ENST00000395090 BAG6P46379 1132 aa14.01□□□□□ -0.17
RTN1-203ENST00000395090 NFIXQ14938 502 aa14.01□□□□□ -0.17
RTN1-203ENST00000395090 CCDC57Q2TAC2 916 aa14.01□□□□□ -0.17
RTN1-203ENST00000395090 TPTE2Q6XPS3 522 aa14.01□□□□□ -0.17
RTN1-203ENST00000395090 BICDL1Q6ZP65 573 aa14.01□□□□□ -0.17
RTN1-203ENST00000395090 COL23A1Q86Y22 540 aaPredicted RBP14.01□□□□□ -0.17
RTN1-203ENST00000395090 OSBPL3Q9H4L5 887 aa14.01□□□□□ -0.17
RTN1-203ENST00000395090 SALL3Q9BXA9 1300 aa14.01□□□□□ -0.17
RTN1-203ENST00000395090 FAM177BA6PVY3 158 aa14.01□□□□□ -0.17
RTN1-203ENST00000395090 CIAO1O76071 339 aa14.01□□□□□ -0.17
RTN1-203ENST00000395090 HCLS1P14317 486 aaPredicted RBP14.01□□□□□ -0.17
RTN1-203ENST00000395090 IFIT5Q13325 482 aaKnown RBP14.01□□□□□ -0.17
RTN1-203ENST00000395090 ANKLE1Q8NAG6 615 aa14.01□□□□□ -0.17
RTN1-203ENST00000395090 ARHGAP9Q9BRR9 750 aa14.01□□□□□ -0.17
RTN1-203ENST00000395090 CHMP3Q9Y3E7 222 aa14.01□□□□□ -0.17
RTN1-203ENST00000395090 RTL9Q8NET4 1388 aa14□□□□□ -0.17
RTN1-203ENST00000395090 SLC15A2Q16348 729 aa14□□□□□ -0.17
RTN1-203ENST00000395090 ERFEQ4G0M1 354 aa14□□□□□ -0.17
RTN1-203ENST00000395090 ATG9AQ7Z3C6 839 aa14□□□□□ -0.17
RTN1-203ENST00000395090 NBPF5PQ86XG9 351 aaPredicted RBP14□□□□□ -0.17
RTN1-203ENST00000395090 BAP1Q92560 729 aa14□□□□□ -0.17
RTN1-203ENST00000395090 GREM2Q9H772 168 aa14□□□□□ -0.17
RTN1-203ENST00000395090 STAP2Q9UGK3 403 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms