RNA–Protein interactions for RNA: ENST00000394821.2

SLC6A4-202, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-202ENST00000394821 RAI14Q9P0K7 980 aa20.27■□□□□ 0.84
SLC6A4-202ENST00000394821 RPAP1Q9BWH6 1393 aaPredicted RBP20.27■□□□□ 0.84
SLC6A4-202ENST00000394821 PRDX5P30044 214 aa20.27■□□□□ 0.83
SLC6A4-202ENST00000394821 TICAM2Q86XR7 235 aa20.27■□□□□ 0.83
SLC6A4-202ENST00000394821 MPNDQ8N594 471 aa20.27■□□□□ 0.83
SLC6A4-202ENST00000394821 MIGA1Q8NAN2 632 aa20.27■□□□□ 0.83
SLC6A4-202ENST00000394821 CD209Q9NNX6 404 aa20.27■□□□□ 0.83
SLC6A4-202ENST00000394821 CHD4Q14839 1912 aa20.26■□□□□ 0.83
SLC6A4-202ENST00000394821 CYP21A2P08686 494 aa20.26■□□□□ 0.83
SLC6A4-202ENST00000394821 LRRFIP1Q32MZ4 808 aaKnown RBP20.26■□□□□ 0.83
SLC6A4-202ENST00000394821 ZSCAN25Q6NSZ9 544 aa20.26■□□□□ 0.83
SLC6A4-202ENST00000394821 C15orf52Q6ZUT6 534 aaKnown RBP20.26■□□□□ 0.83
SLC6A4-202ENST00000394821 TMC4Q7Z404 712 aa20.26■□□□□ 0.83
SLC6A4-202ENST00000394821 GZF1Q9H116 711 aaPredicted RBP20.26■□□□□ 0.83
SLC6A4-202ENST00000394821 LIMCH1Q9UPQ0 1083 aa20.26■□□□□ 0.83
SLC6A4-202ENST00000394821 KCNA3P22001 575 aa20.25■□□□□ 0.83
SLC6A4-202ENST00000394821 DPP8Q6V1X1 898 aaPredicted RBP20.25■□□□□ 0.83
SLC6A4-202ENST00000394821 PDRG1Q9NUG6 133 aa20.25■□□□□ 0.83
SLC6A4-202ENST00000394821 CYP46A1Q9Y6A2 500 aa20.25■□□□□ 0.83
SLC6A4-202ENST00000394821 LARGE1O95461 756 aa20.25■□□□□ 0.83
SLC6A4-202ENST00000394821 DPEP1P16444 411 aa20.25■□□□□ 0.83
SLC6A4-202ENST00000394821 ZNF804AQ7Z570 1209 aa20.25■□□□□ 0.83
SLC6A4-202ENST00000394821 ARMT1Q9H993 441 aa20.25■□□□□ 0.83
SLC6A4-202ENST00000394821 SEMA3EO15041 775 aa20.24■□□□□ 0.83
SLC6A4-202ENST00000394821 DSCC1Q9BVC3 393 aa20.24■□□□□ 0.83
SLC6A4-202ENST00000394821 MBD4O95243 580 aa20.24■□□□□ 0.83
SLC6A4-202ENST00000394821 CYP7A1P22680 504 aa20.24■□□□□ 0.83
SLC6A4-202ENST00000394821 DOK7Q18PE1 504 aa20.24■□□□□ 0.83
SLC6A4-202ENST00000394821 LCORLQ8N3X6 602 aa20.24■□□□□ 0.83
SLC6A4-202ENST00000394821 C7orf43Q8WVR3 580 aa20.24■□□□□ 0.83
SLC6A4-202ENST00000394821 CHAMP1Q96JM3 812 aa20.24■□□□□ 0.83
SLC6A4-202ENST00000394821 STRBPQ96SI9 672 aaKnown RBP20.24■□□□□ 0.83
SLC6A4-202ENST00000394821 PRKAB2O43741 272 aa20.23■□□□□ 0.83
SLC6A4-202ENST00000394821 BRD1O95696 1058 aa20.23■□□□□ 0.83
SLC6A4-202ENST00000394821 MECOMQ03112 1051 aa20.23■□□□□ 0.83
SLC6A4-202ENST00000394821 TSGA10IPQ3SY00 556 aa20.23■□□□□ 0.83
SLC6A4-202ENST00000394821 STOX1Q6ZVD7 989 aa20.23■□□□□ 0.83
SLC6A4-202ENST00000394821 U3KPZ7 1027 aaPredicted RBP20.23■□□□□ 0.83
SLC6A4-202ENST00000394821 C21orf2O43822 256 aa20.22■□□□□ 0.83
SLC6A4-202ENST00000394821 FGAP02671 866 aa20.22■□□□□ 0.83
SLC6A4-202ENST00000394821 RNF20Q5VTR2 975 aa20.22■□□□□ 0.83
SLC6A4-202ENST00000394821 CNKSR1Q969H4 720 aa20.22■□□□□ 0.83
SLC6A4-202ENST00000394821 TCEANC2Q96MN5 208 aa20.22■□□□□ 0.83
SLC6A4-202ENST00000394821 MTFR1LQ9H019 292 aa20.22■□□□□ 0.83
SLC6A4-202ENST00000394821 IL1R1P14778 569 aa20.22■□□□□ 0.83
SLC6A4-202ENST00000394821 HAND2P61296 217 aa20.22■□□□□ 0.83
SLC6A4-202ENST00000394821 AIDAQ96BJ3 306 aa20.22■□□□□ 0.83
SLC6A4-202ENST00000394821 NSUN4Q96CB9 384 aaKnown RBP20.22■□□□□ 0.83
SLC6A4-202ENST00000394821 DYNLL1P63167 89 aaKnown RBP20.21■□□□□ 0.83
SLC6A4-202ENST00000394821 FOXD4L5Q5VV16 416 aaPredicted RBP20.21■□□□□ 0.83
SLC6A4-202ENST00000394821 MCTP1Q6DN14 999 aa20.21■□□□□ 0.83
SLC6A4-202ENST00000394821 FOXD4L4Q8WXT5 416 aaPredicted RBP20.21■□□□□ 0.83
SLC6A4-202ENST00000394821 DLEC1Q9Y238 1755 aa20.21■□□□□ 0.83
SLC6A4-202ENST00000394821 KCNQ5Q9NR82 932 aa20.21■□□□□ 0.83
SLC6A4-202ENST00000394821 PPP1R1BQ9UD71 204 aaPredicted RBP20.21■□□□□ 0.83
SLC6A4-202ENST00000394821 PDS5AQ29RF7 1337 aaKnown RBP20.21■□□□□ 0.83
SLC6A4-202ENST00000394821 PSMA5P28066 241 aa20.2■□□□□ 0.82
SLC6A4-202ENST00000394821 ST3GAL1Q11201 340 aa20.2■□□□□ 0.82
SLC6A4-202ENST00000394821 NAA16Q6N069 864 aaPredicted RBP20.2■□□□□ 0.82
SLC6A4-202ENST00000394821 ZC3H12CQ9C0D7 883 aaKnown RBP20.2■□□□□ 0.82
SLC6A4-202ENST00000394821 KIF13BQ9NQT8 1826 aa20.2■□□□□ 0.82
SLC6A4-202ENST00000394821 MXD3Q9BW11 206 aa20.19■□□□□ 0.82
SLC6A4-202ENST00000394821 EPB41L4AQ9HCS5 686 aaPredicted RBP20.19■□□□□ 0.82
SLC6A4-202ENST00000394821 KIAA1551Q9HCM1 1747 aa20.19■□□□□ 0.82
SLC6A4-202ENST00000394821 GOLGA6L22H0YM25 854 aa20.19■□□□□ 0.82
SLC6A4-202ENST00000394821 APPP05067 770 aa20.19■□□□□ 0.82
SLC6A4-202ENST00000394821 TPCN1Q9ULQ1 816 aa20.19■□□□□ 0.82
SLC6A4-202ENST00000394821 SNED1Q8TER0 1413 aa20.19■□□□□ 0.82
SLC6A4-202ENST00000394821 PTMSP20962 102 aa20.18■□□□□ 0.82
SLC6A4-202ENST00000394821 RPS6KB1P23443 525 aa20.18■□□□□ 0.82
SLC6A4-202ENST00000394821 ME3Q16798 604 aa20.18■□□□□ 0.82
SLC6A4-202ENST00000394821 BLOC1S2Q6QNY1 142 aa20.18■□□□□ 0.82
SLC6A4-202ENST00000394821 SGIP1Q9BQI5 828 aa20.18■□□□□ 0.82
SLC6A4-202ENST00000394821 DBNDD1Q9H9R9 158 aa20.18■□□□□ 0.82
SLC6A4-202ENST00000394821 LAMA4Q16363 1823 aa20.18■□□□□ 0.82
SLC6A4-202ENST00000394821 CCDC88AQ3V6T2 1871 aa20.18■□□□□ 0.82
SLC6A4-202ENST00000394821 GTF2IP78347 998 aa20.18■□□□□ 0.82
SLC6A4-202ENST00000394821 DIXDC1Q155Q3 683 aa20.18■□□□□ 0.82
SLC6A4-202ENST00000394821 SKOR2Q2VWA4 1001 aaPredicted RBP20.18■□□□□ 0.82
SLC6A4-202ENST00000394821 KLHL34Q8N239 644 aa20.18■□□□□ 0.82
SLC6A4-202ENST00000394821 TTLL6Q8N841 843 aa20.18■□□□□ 0.82
SLC6A4-202ENST00000394821 NKX2-3Q8TAU0 364 aa20.18■□□□□ 0.82
SLC6A4-202ENST00000394821 SDR42E1Q8WUS8 393 aa20.18■□□□□ 0.82
SLC6A4-202ENST00000394821 RIOK1Q9BRS2 568 aaKnown RBP20.18■□□□□ 0.82
SLC6A4-202ENST00000394821 TMX4Q9H1E5 349 aaPredicted RBP20.18■□□□□ 0.82
SLC6A4-202ENST00000394821 LMBRD1Q9NUN5 540 aa20.18■□□□□ 0.82
SLC6A4-202ENST00000394821 GSG1L2A8MUP6 293 aa20.17■□□□□ 0.82
SLC6A4-202ENST00000394821 WDR66Q8TBY9 1149 aa20.17■□□□□ 0.82
SLC6A4-202ENST00000394821 NBPF3Q9H094 633 aa20.17■□□□□ 0.82
SLC6A4-202ENST00000394821 SMIM22K7EJ46 135 aa20.17■□□□□ 0.82
SLC6A4-202ENST00000394821 DTNBO60941 627 aa20.17■□□□□ 0.82
SLC6A4-202ENST00000394821 POLD1P28340 1107 aa20.17■□□□□ 0.82
SLC6A4-202ENST00000394821 CCDC83Q8IWF9 413 aa20.17■□□□□ 0.82
SLC6A4-202ENST00000394821 FBXW7Q969H0 707 aa20.17■□□□□ 0.82
SLC6A4-202ENST00000394821 AATFQ9NY61 560 aaKnown RBP eCLIP20.17■□□□□ 0.82
SLC6A4-202ENST00000394821 SLC4A4Q9Y6R1 1079 aa20.17■□□□□ 0.82
SLC6A4-202ENST00000394821 SALL1Q9NSC2 1324 aa20.16■□□□□ 0.82
SLC6A4-202ENST00000394821 MAGEB6P1A0A0J9YX57 407 aa20.16■□□□□ 0.82
SLC6A4-202ENST00000394821 LDHBP07195 334 aaKnown RBP20.16■□□□□ 0.82
SLC6A4-202ENST00000394821 PTGER2P43116 358 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms