RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 IGHMBP2P38935 993 aaKnown RBP21.86■■□□□ 1.09
SIL1-202ENST00000394817 RASGRF1Q13972 1273 aa21.86■■□□□ 1.09
SIL1-202ENST00000394817 RC3H1Q5TC82 1133 aaKnown RBP21.86■■□□□ 1.09
SIL1-202ENST00000394817 NAP1L2Q9ULW6 460 aaPredicted RBP21.86■■□□□ 1.09
SIL1-202ENST00000394817 LIG1P18858 919 aa21.85■■□□□ 1.09
SIL1-202ENST00000394817 CLEC4GQ6UXB4 293 aa21.85■■□□□ 1.09
SIL1-202ENST00000394817 GPHNQ9NQX3 736 aaPredicted RBP21.85■■□□□ 1.09
SIL1-202ENST00000394817 SRP68Q9UHB9 627 aaKnown RBP21.85■■□□□ 1.09
SIL1-202ENST00000394817 CFAP45Q9UL16 551 aa21.85■■□□□ 1.09
SIL1-202ENST00000394817 RPS6KA4O75676 772 aa21.84■■□□□ 1.09
SIL1-202ENST00000394817 BCL11BQ9C0K0 894 aaPredicted RBP21.84■■□□□ 1.09
SIL1-202ENST00000394817 BCL2L12Q9HB09 334 aa21.84■■□□□ 1.09
SIL1-202ENST00000394817 GOLGA6L4A6NEF3 574 aa21.84■■□□□ 1.09
SIL1-202ENST00000394817 NUP62CLQ9H1M0 184 aa21.84■■□□□ 1.09
SIL1-202ENST00000394817 ADD1P35611 737 aaKnown RBP21.83■■□□□ 1.09
SIL1-202ENST00000394817 ALX1Q15699 326 aa21.83■■□□□ 1.09
SIL1-202ENST00000394817 ATL3Q6DD88 541 aa21.83■■□□□ 1.09
SIL1-202ENST00000394817 TBC1D10CQ8IV04 446 aa21.83■■□□□ 1.09
SIL1-202ENST00000394817 STRBPQ96SI9 672 aaKnown RBP21.83■■□□□ 1.09
SIL1-202ENST00000394817 DDX19AQ9NUU7 478 aaKnown RBP21.83■■□□□ 1.09
SIL1-202ENST00000394817 HPS5Q9UPZ3 1129 aa21.83■■□□□ 1.09
SIL1-202ENST00000394817 COL24A1Q17RW2 1714 aa21.82■■□□□ 1.08
SIL1-202ENST00000394817 KLF18A0A0U1RQI7 1052 aa21.82■■□□□ 1.08
SIL1-202ENST00000394817 DHX16O60231 1041 aaKnown RBP21.82■■□□□ 1.08
SIL1-202ENST00000394817 MAP3K12Q12852 859 aa21.82■■□□□ 1.08
SIL1-202ENST00000394817 BICDL1Q6ZP65 573 aa21.82■■□□□ 1.08
SIL1-202ENST00000394817 KRT27Q7Z3Y8 459 aa21.82■■□□□ 1.08
SIL1-202ENST00000394817 AIDAQ96BJ3 306 aa21.82■■□□□ 1.08
SIL1-202ENST00000394817 PGBD1Q96JS3 809 aa21.82■■□□□ 1.08
SIL1-202ENST00000394817 NOL7Q9UMY1 257 aaKnown RBP21.82■■□□□ 1.08
SIL1-202ENST00000394817 TAF1P21675 1872 aa21.82■■□□□ 1.08
SIL1-202ENST00000394817 ECM29Q5VYK3 1845 aa21.82■■□□□ 1.08
SIL1-202ENST00000394817 GOLGA8BA8MQT2 603 aa21.82■■□□□ 1.08
SIL1-202ENST00000394817 SNAP23O00161 211 aa21.82■■□□□ 1.08
SIL1-202ENST00000394817 RGL2O15211 777 aa21.82■■□□□ 1.08
SIL1-202ENST00000394817 FDPSP14324 419 aaKnown RBP21.82■■□□□ 1.08
SIL1-202ENST00000394817 TRDNQ13061 729 aa21.82■■□□□ 1.08
SIL1-202ENST00000394817 MAP3K11Q16584 847 aa21.82■■□□□ 1.08
SIL1-202ENST00000394817 TBC1D9BQ66K14 1250 aa21.82■■□□□ 1.08
SIL1-202ENST00000394817 CCDC192P0DO97 292 aa21.81■■□□□ 1.08
SIL1-202ENST00000394817 LRRC4BQ9NT99 713 aa21.81■■□□□ 1.08
SIL1-202ENST00000394817 DACT1Q9NYF0 836 aa21.81■■□□□ 1.08
SIL1-202ENST00000394817 CCDC39Q9UFE4 941 aa21.81■■□□□ 1.08
SIL1-202ENST00000394817 NARFQ9UHQ1 456 aa21.81■■□□□ 1.08
SIL1-202ENST00000394817 MSNP26038 577 aaKnown RBP21.8■■□□□ 1.08
SIL1-202ENST00000394817 CHRNDQ07001 517 aa21.8■■□□□ 1.08
SIL1-202ENST00000394817 RBM43Q6ZSC3 357 aaKnown RBP21.8■■□□□ 1.08
SIL1-202ENST00000394817 CDC5LQ99459 802 aaKnown RBP21.8■■□□□ 1.08
SIL1-202ENST00000394817 APPP05067 770 aa21.8■■□□□ 1.08
SIL1-202ENST00000394817 MAGEB6Q8N7X4 407 aa21.8■■□□□ 1.08
SIL1-202ENST00000394817 RTCBQ9Y3I0 505 aaKnown RBP21.8■■□□□ 1.08
SIL1-202ENST00000394817 FOSBP53539 338 aa21.79■■□□□ 1.08
SIL1-202ENST00000394817 ERFEQ4G0M1 354 aa21.79■■□□□ 1.08
SIL1-202ENST00000394817 CLSTN2Q9H4D0 955 aa21.79■■□□□ 1.08
SIL1-202ENST00000394817 RCOR1Q9UKL0 485 aa21.79■■□□□ 1.08
SIL1-202ENST00000394817 ANGEL1Q9UNK9 670 aaKnown RBP21.79■■□□□ 1.08
SIL1-202ENST00000394817 FAM196AQ6ZSG2 479 aa21.78■■□□□ 1.08
SIL1-202ENST00000394817 BICD2Q8TD16 824 aa21.78■■□□□ 1.08
SIL1-202ENST00000394817 ARHGEF1Q92888 912 aaKnown RBP21.78■■□□□ 1.08
SIL1-202ENST00000394817 PATL2C9JE40 543 aaKnown RBP21.78■■□□□ 1.08
SIL1-202ENST00000394817 TRIM37O94972 964 aa21.78■■□□□ 1.08
SIL1-202ENST00000394817 MBD4O95243 580 aa21.78■■□□□ 1.08
SIL1-202ENST00000394817 BCAMP50895 628 aa21.78■■□□□ 1.08
SIL1-202ENST00000394817 C3orf67Q6ZVT6 689 aa21.78■■□□□ 1.08
SIL1-202ENST00000394817 ZNF396Q96N95 335 aaPredicted RBP21.78■■□□□ 1.08
SIL1-202ENST00000394817 TNMDQ9H2S6 317 aa21.78■■□□□ 1.08
SIL1-202ENST00000394817 EPB41L4AQ9HCS5 686 aaPredicted RBP21.78■■□□□ 1.08
SIL1-202ENST00000394817 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.78■■□□□ 1.08
SIL1-202ENST00000394817 USP25Q9UHP3 1055 aa21.78■■□□□ 1.08
SIL1-202ENST00000394817 MYH13Q9UKX3 1938 aa21.77■■□□□ 1.08
SIL1-202ENST00000394817 ZNF804BA4D1E1 1349 aa21.77■■□□□ 1.08
SIL1-202ENST00000394817 SH2B2O14492 632 aaPredicted RBP21.77■■□□□ 1.08
SIL1-202ENST00000394817 SF3B3Q15393 1217 aaKnown RBP21.77■■□□□ 1.08
SIL1-202ENST00000394817 CYB5R4Q7L1T6 521 aa21.77■■□□□ 1.08
SIL1-202ENST00000394817 ILDR1Q86SU0 546 aaPredicted RBP21.77■■□□□ 1.08
SIL1-202ENST00000394817 RGS22Q8NE09 1264 aa21.77■■□□□ 1.08
SIL1-202ENST00000394817 DENND2AQ9ULE3 1009 aa21.77■■□□□ 1.08
SIL1-202ENST00000394817 ZKSCAN5Q9Y2L8 839 aa21.77■■□□□ 1.08
SIL1-202ENST00000394817 NEDD4P46934 1319 aa21.77■■□□□ 1.07
SIL1-202ENST00000394817 PNPLA7Q6ZV29 1317 aa21.77■■□□□ 1.07
SIL1-202ENST00000394817 ZPR1O75312 459 aa21.76■■□□□ 1.07
SIL1-202ENST00000394817 NR1I2O75469 434 aa21.76■■□□□ 1.07
SIL1-202ENST00000394817 TMEM87BQ96K49 555 aa21.76■■□□□ 1.07
SIL1-202ENST00000394817 PPFIA3O75145 1194 aa21.76■■□□□ 1.07
SIL1-202ENST00000394817 GUCY1B3Q02153 619 aa21.76■■□□□ 1.07
SIL1-202ENST00000394817 IFNL3Q8IZI9 196 aa21.76■■□□□ 1.07
SIL1-202ENST00000394817 USP28Q96RU2 1077 aa21.76■■□□□ 1.07
SIL1-202ENST00000394817 NAPBQ9H115 298 aa21.76■■□□□ 1.07
SIL1-202ENST00000394817 UBR3Q6ZT12 1888 aa21.75■■□□□ 1.07
SIL1-202ENST00000394817 CPLX1O14810 134 aa21.75■■□□□ 1.07
SIL1-202ENST00000394817 KDM4AO75164 1064 aa21.75■■□□□ 1.07
SIL1-202ENST00000394817 TYRO3Q06418 890 aa21.75■■□□□ 1.07
SIL1-202ENST00000394817 CAMK4Q16566 473 aa21.75■■□□□ 1.07
SIL1-202ENST00000394817 ANKRD18AQ8IVF6 992 aa21.75■■□□□ 1.07
SIL1-202ENST00000394817 NKX2-3Q8TAU0 364 aa21.75■■□□□ 1.07
SIL1-202ENST00000394817 C8orf76Q96K31 380 aa21.75■■□□□ 1.07
SIL1-202ENST00000394817 ORC3Q9UBD5 711 aaPredicted RBP21.75■■□□□ 1.07
SIL1-202ENST00000394817 CACNA1SQ13698 1873 aa21.74■■□□□ 1.07
SIL1-202ENST00000394817 B4E1Z4 1266 aa21.74■■□□□ 1.07
SIL1-202ENST00000394817 GNAT2P19087 354 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms