RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 C16orf45Q96MC5 204 aaPredicted RBP15.78■□□□□ 0.12
GTF2F1-201ENST00000394456 PCDHA7Q9UN72 937 aa15.78■□□□□ 0.12
GTF2F1-201ENST00000394456 AKAP2Q9Y2D5 859 aa15.78■□□□□ 0.12
GTF2F1-201ENST00000394456 RIPOR2Q9Y4F9 1068 aa15.78■□□□□ 0.12
GTF2F1-201ENST00000394456 KLF18A0A0U1RQI7 1052 aa15.78■□□□□ 0.12
GTF2F1-201ENST00000394456 KIF28PB7ZC32 967 aa15.78■□□□□ 0.12
GTF2F1-201ENST00000394456 UBE2Q2LH0YL09 131 aa15.78■□□□□ 0.12
GTF2F1-201ENST00000394456 PRC1O43663 620 aa15.78■□□□□ 0.12
GTF2F1-201ENST00000394456 ENGASEQ8NFI3 743 aa15.78■□□□□ 0.12
GTF2F1-201ENST00000394456 NGLY1Q96IV0 654 aa15.78■□□□□ 0.12
GTF2F1-201ENST00000394456 NBPF3Q9H094 633 aa15.78■□□□□ 0.12
GTF2F1-201ENST00000394456 CLIP2Q9UDT6 1046 aa15.78■□□□□ 0.12
GTF2F1-201ENST00000394456 MCAMP43121 646 aa15.77■□□□□ 0.12
GTF2F1-201ENST00000394456 ATP2B3Q16720 1220 aa15.77■□□□□ 0.12
GTF2F1-201ENST00000394456 SUSD4Q5VX71 490 aa15.77■□□□□ 0.12
GTF2F1-201ENST00000394456 BARGINQ6ZT62 677 aa15.77■□□□□ 0.12
GTF2F1-201ENST00000394456 PDE8AO60658 829 aa15.77■□□□□ 0.11
GTF2F1-201ENST00000394456 HELBQ8NG08 1087 aaPredicted RBP15.77■□□□□ 0.11
GTF2F1-201ENST00000394456 FBXO3Q9UK99 471 aa15.77■□□□□ 0.11
GTF2F1-201ENST00000394456 GOLGA8BA8MQT2 603 aa15.76■□□□□ 0.11
GTF2F1-201ENST00000394456 ZMYND15Q9H091 742 aa15.76■□□□□ 0.11
GTF2F1-201ENST00000394456 BCL2L12Q9HB09 334 aa15.76■□□□□ 0.11
GTF2F1-201ENST00000394456 USP27XA6NNY8 438 aa15.76■□□□□ 0.11
GTF2F1-201ENST00000394456 GPAA1O43292 621 aa15.76■□□□□ 0.11
GTF2F1-201ENST00000394456 PDIA4P13667 645 aaKnown RBP15.76■□□□□ 0.11
GTF2F1-201ENST00000394456 NDUFA8P51970 172 aa15.76■□□□□ 0.11
GTF2F1-201ENST00000394456 NAA30Q147X3 362 aaPredicted RBP15.76■□□□□ 0.11
GTF2F1-201ENST00000394456 MB21D2Q8IYB1 491 aaPredicted RBP15.76■□□□□ 0.11
GTF2F1-201ENST00000394456 ZNF274Q96GC6 653 aaPredicted RBP15.76■□□□□ 0.11
GTF2F1-201ENST00000394456 MYO5AQ9Y4I1 1855 aaKnown RBP15.76■□□□□ 0.11
GTF2F1-201ENST00000394456 HMGN5P82970 282 aaKnown RBP15.75■□□□□ 0.11
GTF2F1-201ENST00000394456 PTF1AQ7RTS3 328 aa15.75■□□□□ 0.11
GTF2F1-201ENST00000394456 DHX40Q8IX18 779 aaKnown RBP15.75■□□□□ 0.11
GTF2F1-201ENST00000394456 GOLGA6L6A8MZA4 724 aa15.75■□□□□ 0.11
GTF2F1-201ENST00000394456 BIN1O00499 593 aa15.75■□□□□ 0.11
GTF2F1-201ENST00000394456 ISM2Q6H9L7 571 aa15.75■□□□□ 0.11
GTF2F1-201ENST00000394456 TBC1D10CQ8IV04 446 aa15.75■□□□□ 0.11
GTF2F1-201ENST00000394456 PRIMPOLQ96LW4 560 aa15.75■□□□□ 0.11
GTF2F1-201ENST00000394456 PIH1D3Q9NQM4 214 aaKnown RBP15.75■□□□□ 0.11
GTF2F1-201ENST00000394456 CAMTA2O94983 1202 aa15.74■□□□□ 0.11
GTF2F1-201ENST00000394456 CCDC73Q6ZRK6 1079 aa15.74■□□□□ 0.11
GTF2F1-201ENST00000394456 SMIM5Q71RC9 77 aa15.74■□□□□ 0.11
GTF2F1-201ENST00000394456 AOPEPQ8N6M6 819 aa15.74■□□□□ 0.11
GTF2F1-201ENST00000394456 PRDM10Q9NQV6 1147 aa15.74■□□□□ 0.11
GTF2F1-201ENST00000394456 AKAP11Q9UKA4 1901 aa15.74■□□□□ 0.11
GTF2F1-201ENST00000394456 SPEF2Q9C093 1822 aa15.74■□□□□ 0.11
GTF2F1-201ENST00000394456 MYH7P12883 1935 aa15.74■□□□□ 0.11
GTF2F1-201ENST00000394456 CYB5R4Q7L1T6 521 aa15.74■□□□□ 0.11
GTF2F1-201ENST00000394456 MYL10Q9BUA6 226 aa15.74■□□□□ 0.11
GTF2F1-201ENST00000394456 ORC3Q9UBD5 711 aaPredicted RBP15.74■□□□□ 0.11
GTF2F1-201ENST00000394456 KINO60870 393 aaKnown RBP15.74■□□□□ 0.11
GTF2F1-201ENST00000394456 FAM160A1Q05DH4 1040 aa15.74■□□□□ 0.11
GTF2F1-201ENST00000394456 IMMTQ16891 758 aaKnown RBP15.74■□□□□ 0.11
GTF2F1-201ENST00000394456 GLIPR1L2Q4G1C9 344 aa15.74■□□□□ 0.11
GTF2F1-201ENST00000394456 FILIP1Q7Z7B0 1213 aa15.74■□□□□ 0.11
GTF2F1-201ENST00000394456 NIP7Q9Y221 180 aaKnown RBP eCLIP15.74■□□□□ 0.11
GTF2F1-201ENST00000394456 FAM182BQ5T319 152 aa15.73■□□□□ 0.11
GTF2F1-201ENST00000394456 FMR1NBQ8N0W7 255 aaPredicted RBP15.73■□□□□ 0.11
GTF2F1-201ENST00000394456 STK11IPQ8N1F8 1099 aa15.73■□□□□ 0.11
GTF2F1-201ENST00000394456 VGLL2Q8N8G2 317 aa15.73■□□□□ 0.11
GTF2F1-201ENST00000394456 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.73■□□□□ 0.11
GTF2F1-201ENST00000394456 SEC31BQ9NQW1 1179 aa15.73■□□□□ 0.11
GTF2F1-201ENST00000394456 KIF3AQ9Y496 699 aa15.73■□□□□ 0.11
GTF2F1-201ENST00000394456 NEDD4P46934 1319 aa15.73■□□□□ 0.11
GTF2F1-201ENST00000394456 IDH1O75874 414 aaKnown RBP15.73■□□□□ 0.11
GTF2F1-201ENST00000394456 APPBP2Q92624 585 aa15.73■□□□□ 0.11
GTF2F1-201ENST00000394456 C8orf76Q96K31 380 aa15.73■□□□□ 0.11
GTF2F1-201ENST00000394456 UTP14AQ9BVJ6 771 aaKnown RBP15.73■□□□□ 0.11
GTF2F1-201ENST00000394456 BCL9LQ86UU0 1499 aa15.72■□□□□ 0.11
GTF2F1-201ENST00000394456 GOLGA6L19H0YKK7 550 aa15.72■□□□□ 0.11
GTF2F1-201ENST00000394456 MARCKSP29966 332 aaPredicted RBP15.72■□□□□ 0.11
GTF2F1-201ENST00000394456 PHKA1P46020 1223 aa15.72■□□□□ 0.11
GTF2F1-201ENST00000394456 STX1AQ16623 288 aa15.72■□□□□ 0.11
GTF2F1-201ENST00000394456 DPCR1Q3MIW9 517 aa15.72■□□□□ 0.11
GTF2F1-201ENST00000394456 SLC9C2Q5TAH2 1124 aa15.72■□□□□ 0.11
GTF2F1-201ENST00000394456 LINC00301Q8NCQ3 95 aa15.72■□□□□ 0.11
GTF2F1-201ENST00000394456 PHKBQ93100 1093 aa15.72■□□□□ 0.11
GTF2F1-201ENST00000394456 ZNF396Q96N95 335 aaPredicted RBP15.72■□□□□ 0.11
GTF2F1-201ENST00000394456 WWC3Q9ULE0 1092 aa15.72■□□□□ 0.11
GTF2F1-201ENST00000394456 PDE8BO95263 885 aa15.72■□□□□ 0.11
GTF2F1-201ENST00000394456 GTF2F1P35269 517 aaKnown RBP eCLIP15.72■□□□□ 0.11
GTF2F1-201ENST00000394456 DDX60Q8IY21 1712 aaKnown RBP15.71■□□□□ 0.11
GTF2F1-201ENST00000394456 RREB1Q92766 1687 aa15.71■□□□□ 0.11
GTF2F1-201ENST00000394456 STK38Q15208 465 aa15.71■□□□□ 0.11
GTF2F1-201ENST00000394456 PTPN21Q16825 1174 aa15.71■□□□□ 0.11
GTF2F1-201ENST00000394456 LINC00116Q8NCU8 138 aa15.71■□□□□ 0.11
GTF2F1-201ENST00000394456 TACC3Q9Y6A5 838 aa15.71■□□□□ 0.11
GTF2F1-201ENST00000394456 COL5A3P25940 1745 aaPredicted RBP15.71■□□□□ 0.11
GTF2F1-201ENST00000394456 ZNF213O14771 459 aa15.71■□□□□ 0.11
GTF2F1-201ENST00000394456 APPP05067 770 aa15.71■□□□□ 0.11
GTF2F1-201ENST00000394456 FBXO18Q8NFZ0 1043 aa15.71■□□□□ 0.11
GTF2F1-201ENST00000394456 MRPS27Q92552 414 aaKnown RBP15.71■□□□□ 0.11
GTF2F1-201ENST00000394456 SDF4Q9BRK5 362 aa15.71■□□□□ 0.11
GTF2F1-201ENST00000394456 MROH7-TTC4A0A0A0MT08 1334 aa15.7■□□□□ 0.1
GTF2F1-201ENST00000394456 BECN2A8MW95 431 aa15.7■□□□□ 0.1
GTF2F1-201ENST00000394456 B4E1Z4 1266 aa15.7■□□□□ 0.1
GTF2F1-201ENST00000394456 WDHD1O75717 1129 aaPredicted RBP15.7■□□□□ 0.1
GTF2F1-201ENST00000394456 CDC27P30260 824 aa15.7■□□□□ 0.1
GTF2F1-201ENST00000394456 EVCP57679 992 aa15.7■□□□□ 0.1
GTF2F1-201ENST00000394456 SMARCC1Q92922 1105 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms