RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 RFX5P48382 616 aaPredicted RBP21.75■■□□□ 1.07
HOXC6-202ENST00000394331 DCCP43146 1447 aa21.74■■□□□ 1.07
HOXC6-202ENST00000394331 LONRF2Q1L5Z9 754 aa21.74■■□□□ 1.07
HOXC6-202ENST00000394331 CABP4P57796 275 aa21.74■■□□□ 1.07
HOXC6-202ENST00000394331 PTPN12Q05209 780 aaKnown RBP21.74■■□□□ 1.07
HOXC6-202ENST00000394331 TNNI3KQ59H18 835 aa21.74■■□□□ 1.07
HOXC6-202ENST00000394331 PARD6BQ9BYG5 372 aa21.74■■□□□ 1.07
HOXC6-202ENST00000394331 FPGT-TNNI3KV9GXZ4 949 aa21.74■■□□□ 1.07
HOXC6-202ENST00000394331 GOLGA6L9A6NEM1 432 aa21.73■■□□□ 1.07
HOXC6-202ENST00000394331 CT47A1Q5JQC4 288 aaPredicted RBP21.73■■□□□ 1.07
HOXC6-202ENST00000394331 JCADQ9P266 1359 aa21.73■■□□□ 1.07
HOXC6-202ENST00000394331 FANCGO15287 622 aa21.73■■□□□ 1.07
HOXC6-202ENST00000394331 ZSCAN12O43309 604 aa21.73■■□□□ 1.07
HOXC6-202ENST00000394331 APOBRQ0VD83 1088 aa21.73■■□□□ 1.07
HOXC6-202ENST00000394331 UBE3BQ7Z3V4 1068 aa21.73■■□□□ 1.07
HOXC6-202ENST00000394331 TMC6Q7Z403 805 aa21.73■■□□□ 1.07
HOXC6-202ENST00000394331 MRFAP1Q9Y605 127 aa21.73■■□□□ 1.07
HOXC6-202ENST00000394331 RFX7Q2KHR2 1363 aa21.73■■□□□ 1.07
HOXC6-202ENST00000394331 RPS6KB1P23443 525 aa21.73■■□□□ 1.07
HOXC6-202ENST00000394331 DDX54Q8TDD1 881 aaKnown RBP21.73■■□□□ 1.07
HOXC6-202ENST00000394331 TMEM94Q12767 1356 aa21.72■■□□□ 1.07
HOXC6-202ENST00000394331 KRT32Q14532 448 aa21.72■■□□□ 1.07
HOXC6-202ENST00000394331 ATL3Q6DD88 541 aa21.72■■□□□ 1.07
HOXC6-202ENST00000394331 ENGASEQ8NFI3 743 aa21.72■■□□□ 1.07
HOXC6-202ENST00000394331 PLBD2Q8NHP8 589 aa21.72■■□□□ 1.07
HOXC6-202ENST00000394331 GOLGA1Q92805 767 aa21.72■■□□□ 1.07
HOXC6-202ENST00000394331 XPO4Q9C0E2 1151 aaKnown RBP21.72■■□□□ 1.07
HOXC6-202ENST00000394331 DBNLQ9UJU6 430 aaKnown RBP21.72■■□□□ 1.07
HOXC6-202ENST00000394331 RCOR1Q9UKL0 485 aa21.72■■□□□ 1.07
HOXC6-202ENST00000394331 A0A087WZG4 1122 aa21.72■■□□□ 1.07
HOXC6-202ENST00000394331 TXLNAP40222 546 aa21.72■■□□□ 1.07
HOXC6-202ENST00000394331 ZRSR1Q15695 479 aaKnown RBP21.72■■□□□ 1.07
HOXC6-202ENST00000394331 FAM107BQ9H098 131 aa21.72■■□□□ 1.07
HOXC6-202ENST00000394331 TOMM22Q9NS69 142 aa21.72■■□□□ 1.07
HOXC6-202ENST00000394331 KINO60870 393 aaKnown RBP21.71■■□□□ 1.07
HOXC6-202ENST00000394331 TAF5LO75529 589 aa21.71■■□□□ 1.07
HOXC6-202ENST00000394331 EIF3JO75822 258 aaKnown RBP21.71■■□□□ 1.07
HOXC6-202ENST00000394331 USP5P45974 858 aa21.71■■□□□ 1.07
HOXC6-202ENST00000394331 FAM160A1Q05DH4 1040 aa21.71■■□□□ 1.07
HOXC6-202ENST00000394331 TFCP2Q12800 502 aa21.71■■□□□ 1.07
HOXC6-202ENST00000394331 CCDC73Q6ZRK6 1079 aa21.71■■□□□ 1.07
HOXC6-202ENST00000394331 CXorf56Q9H5V9 222 aa21.71■■□□□ 1.07
HOXC6-202ENST00000394331 PPP2R3AQ06190 1150 aa21.71■■□□□ 1.07
HOXC6-202ENST00000394331 DDX17Q92841 729 aaKnown RBP21.71■■□□□ 1.07
HOXC6-202ENST00000394331 COL18A1P39060 1754 aa21.7■■□□□ 1.07
HOXC6-202ENST00000394331 USPL1Q5W0Q7 1092 aa21.7■■□□□ 1.06
HOXC6-202ENST00000394331 CADPS2Q86UW7 1296 aa21.7■■□□□ 1.06
HOXC6-202ENST00000394331 CCAR1Q8IX12 1150 aaKnown RBP21.7■■□□□ 1.06
HOXC6-202ENST00000394331 TNS3Q68CZ2 1445 aa21.7■■□□□ 1.06
HOXC6-202ENST00000394331 POTEB2H3BUK9 544 aa21.7■■□□□ 1.06
HOXC6-202ENST00000394331 CHRNA2Q15822 529 aa21.7■■□□□ 1.06
HOXC6-202ENST00000394331 ZNF589Q86UQ0 364 aaPredicted RBP21.7■■□□□ 1.06
HOXC6-202ENST00000394331 CABLES1Q8TDN4 633 aa21.7■■□□□ 1.06
HOXC6-202ENST00000394331 TUBB4BP68371 445 aa21.69■■□□□ 1.06
HOXC6-202ENST00000394331 HDXQ7Z353 690 aa21.69■■□□□ 1.06
HOXC6-202ENST00000394331 SYTL4Q96C24 671 aaPredicted RBP21.69■■□□□ 1.06
HOXC6-202ENST00000394331 MED4Q9NPJ6 270 aa21.69■■□□□ 1.06
HOXC6-202ENST00000394331 PIP4K2AP48426 406 aaPredicted RBP21.69■■□□□ 1.06
HOXC6-202ENST00000394331 VPS18Q9P253 973 aa21.69■■□□□ 1.06
HOXC6-202ENST00000394331 BANK1Q8NDB2 785 aa21.69■■□□□ 1.06
HOXC6-202ENST00000394331 IFNKQ9P0W0 207 aa21.69■■□□□ 1.06
HOXC6-202ENST00000394331 A0A087WUV0 522 aaPredicted RBP21.68■■□□□ 1.06
HOXC6-202ENST00000394331 ATP5J2-PTCD1G3V325 749 aa21.68■■□□□ 1.06
HOXC6-202ENST00000394331 PTCD1O75127 700 aaKnown RBP21.68■■□□□ 1.06
HOXC6-202ENST00000394331 MYCNP04198 464 aaPredicted RBP21.68■■□□□ 1.06
HOXC6-202ENST00000394331 CPDO75976 1380 aa21.68■■□□□ 1.06
HOXC6-202ENST00000394331 GPATCH11Q8N954 259 aa21.68■■□□□ 1.06
HOXC6-202ENST00000394331 CASP7P55210 303 aa21.67■■□□□ 1.06
HOXC6-202ENST00000394331 TADA2BQ86TJ2 420 aa21.67■■□□□ 1.06
HOXC6-202ENST00000394331 EDC3Q96F86 508 aaKnown RBP21.67■■□□□ 1.06
HOXC6-202ENST00000394331 HAUS7Q99871 368 aa21.67■■□□□ 1.06
HOXC6-202ENST00000394331 GOLPH3LQ9H4A5 285 aa21.67■■□□□ 1.06
HOXC6-202ENST00000394331 RAB21Q9UL25 225 aa21.67■■□□□ 1.06
HOXC6-202ENST00000394331 U3KPZ7 1027 aaPredicted RBP21.67■■□□□ 1.06
HOXC6-202ENST00000394331 CCDC196A0A1B0GTZ2 297 aa21.67■■□□□ 1.06
HOXC6-202ENST00000394331 VWA3AA6NCI4 1184 aa21.66■■□□□ 1.06
HOXC6-202ENST00000394331 ADD1P35611 737 aaKnown RBP21.66■■□□□ 1.06
HOXC6-202ENST00000394331 EIF5P55010 431 aaKnown RBP21.66■■□□□ 1.06
HOXC6-202ENST00000394331 TOB2Q14106 344 aaPredicted RBP21.66■■□□□ 1.06
HOXC6-202ENST00000394331 SPATA31A3Q5VYP0 1347 aa21.66■■□□□ 1.06
HOXC6-202ENST00000394331 PPFIA4O75335 1185 aa21.66■■□□□ 1.06
HOXC6-202ENST00000394331 BEND6Q5SZJ8 279 aaPredicted RBP21.66■■□□□ 1.06
HOXC6-202ENST00000394331 FAM71BQ8TC56 605 aa21.66■■□□□ 1.06
HOXC6-202ENST00000394331 SART3Q15020 963 aaKnown RBP21.66■■□□□ 1.06
HOXC6-202ENST00000394331 DBNDD2Q9BQY9 259 aa21.66■■□□□ 1.06
HOXC6-202ENST00000394331 MCMDC2Q4G0Z9 681 aa21.65■■□□□ 1.06
HOXC6-202ENST00000394331 LMBR1LQ6UX01 489 aa21.65■■□□□ 1.06
HOXC6-202ENST00000394331 LRRC31Q6UY01 552 aa21.65■■□□□ 1.06
HOXC6-202ENST00000394331 TICAM2Q86XR7 235 aa21.65■■□□□ 1.06
HOXC6-202ENST00000394331 TACO1Q9BSH4 297 aaKnown RBP21.65■■□□□ 1.06
HOXC6-202ENST00000394331 EPC1Q9H2F5 836 aa21.65■■□□□ 1.06
HOXC6-202ENST00000394331 PDE11AQ9HCR9 933 aa21.65■■□□□ 1.06
HOXC6-202ENST00000394331 PKD1L3Q7Z443 1732 aa21.65■■□□□ 1.06
HOXC6-202ENST00000394331 H7C1W4 665 aa21.65■■□□□ 1.06
HOXC6-202ENST00000394331 DTNBO60941 627 aa21.65■■□□□ 1.06
HOXC6-202ENST00000394331 GNL2Q13823 731 aaKnown RBP21.65■■□□□ 1.06
HOXC6-202ENST00000394331 FOXR1Q6PIV2 292 aa21.65■■□□□ 1.06
HOXC6-202ENST00000394331 TCEANC2Q96MN5 208 aa21.65■■□□□ 1.06
HOXC6-202ENST00000394331 NEK1Q96PY6 1258 aa21.65■■□□□ 1.06
HOXC6-202ENST00000394331 ARHGAP6O43182 974 aa21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms