RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 GSG1L2A8MUP6 293 aa22.59■■□□□ 1.21
CLDND1-203ENST00000394181 PATL2C9JE40 543 aaKnown RBP22.59■■□□□ 1.21
CLDND1-203ENST00000394181 HOXA10P31260 410 aaPredicted RBP22.59■■□□□ 1.21
CLDND1-203ENST00000394181 TRAK2O60296 914 aa22.59■■□□□ 1.21
CLDND1-203ENST00000394181 FGD1P98174 961 aa22.59■■□□□ 1.21
CLDND1-203ENST00000394181 APOBRQ0VD83 1088 aa22.59■■□□□ 1.21
CLDND1-203ENST00000394181 IFNL3Q8IZI9 196 aa22.59■■□□□ 1.21
CLDND1-203ENST00000394181 LEMD3Q9Y2U8 911 aa22.59■■□□□ 1.21
CLDND1-203ENST00000394181 XDHP47989 1333 aa22.59■■□□□ 1.21
CLDND1-203ENST00000394181 DDX11L8A8MPP1 907 aa22.58■■□□□ 1.21
CLDND1-203ENST00000394181 SYT1P21579 422 aa22.58■■□□□ 1.21
CLDND1-203ENST00000394181 HMGB2P26583 209 aaKnown RBP22.58■■□□□ 1.21
CLDND1-203ENST00000394181 MCTP1Q6DN14 999 aa22.58■■□□□ 1.21
CLDND1-203ENST00000394181 FOXD4L6Q3SYB3 417 aaPredicted RBP22.57■■□□□ 1.2
CLDND1-203ENST00000394181 FOXD4L3Q6VB84 417 aaPredicted RBP22.57■■□□□ 1.2
CLDND1-203ENST00000394181 CAMKK2Q96RR4 588 aa22.57■■□□□ 1.2
CLDND1-203ENST00000394181 SLC4A4Q9Y6R1 1079 aa22.57■■□□□ 1.2
CLDND1-203ENST00000394181 SEMA3EO15041 775 aa22.57■■□□□ 1.2
CLDND1-203ENST00000394181 TACC3Q9Y6A5 838 aa22.57■■□□□ 1.2
CLDND1-203ENST00000394181 BBOX1O75936 387 aa22.56■■□□□ 1.2
CLDND1-203ENST00000394181 PRDX5P30044 214 aa22.56■■□□□ 1.2
CLDND1-203ENST00000394181 DEKP35659 375 aaKnown RBP22.56■■□□□ 1.2
CLDND1-203ENST00000394181 ANTXR2P58335 489 aa22.56■■□□□ 1.2
CLDND1-203ENST00000394181 DYNLL1P63167 89 aaKnown RBP22.56■■□□□ 1.2
CLDND1-203ENST00000394181 MB21D2Q8IYB1 491 aaPredicted RBP22.56■■□□□ 1.2
CLDND1-203ENST00000394181 AGXT2Q9BYV1 514 aa22.56■■□□□ 1.2
CLDND1-203ENST00000394181 ALX1Q15699 326 aa22.56■■□□□ 1.2
CLDND1-203ENST00000394181 OLFM4Q6UX06 510 aa22.56■■□□□ 1.2
CLDND1-203ENST00000394181 FLAD1Q8NFF5 587 aa22.56■■□□□ 1.2
CLDND1-203ENST00000394181 FBXO41Q8TF61 875 aa22.56■■□□□ 1.2
CLDND1-203ENST00000394181 CRAMP1Q96RY5 1269 aa22.56■■□□□ 1.2
CLDND1-203ENST00000394181 BRIP1Q9BX63 1249 aa22.56■■□□□ 1.2
CLDND1-203ENST00000394181 UFL1O94874 794 aa22.55■■□□□ 1.2
CLDND1-203ENST00000394181 MECOMQ03112 1051 aa22.55■■□□□ 1.2
CLDND1-203ENST00000394181 GTF3C6Q969F1 213 aa22.55■■□□□ 1.2
CLDND1-203ENST00000394181 NSUN4Q96CB9 384 aaKnown RBP22.55■■□□□ 1.2
CLDND1-203ENST00000394181 POLLQ9UGP5 575 aa22.55■■□□□ 1.2
CLDND1-203ENST00000394181 CTDSPL2Q05D32 466 aa22.55■■□□□ 1.2
CLDND1-203ENST00000394181 SCRN1Q12765 414 aa22.55■■□□□ 1.2
CLDND1-203ENST00000394181 NAA16Q6N069 864 aaPredicted RBP22.55■■□□□ 1.2
CLDND1-203ENST00000394181 SDR42E1Q8WUS8 393 aa22.55■■□□□ 1.2
CLDND1-203ENST00000394181 RIOK1Q9BRS2 568 aaKnown RBP22.55■■□□□ 1.2
CLDND1-203ENST00000394181 NAPBQ9H115 298 aa22.55■■□□□ 1.2
CLDND1-203ENST00000394181 GZF1Q9H116 711 aaPredicted RBP22.55■■□□□ 1.2
CLDND1-203ENST00000394181 CACNA1SQ13698 1873 aa22.54■■□□□ 1.2
CLDND1-203ENST00000394181 MAGEB6P1A0A0J9YX57 407 aa22.54■■□□□ 1.2
CLDND1-203ENST00000394181 PRC1O43663 620 aa22.54■■□□□ 1.2
CLDND1-203ENST00000394181 JAK2O60674 1132 aa22.54■■□□□ 1.2
CLDND1-203ENST00000394181 GSE1Q14687 1217 aa22.54■■□□□ 1.2
CLDND1-203ENST00000394181 ANKRD31Q8N7Z5 1873 aa22.53■■□□□ 1.2
CLDND1-203ENST00000394181 SMIM22K7EJ46 135 aa22.53■■□□□ 1.2
CLDND1-203ENST00000394181 STX6O43752 255 aa22.53■■□□□ 1.2
CLDND1-203ENST00000394181 SRGNP10124 158 aa22.53■■□□□ 1.2
CLDND1-203ENST00000394181 NCOA7Q8NI08 942 aa22.53■■□□□ 1.2
CLDND1-203ENST00000394181 PARP3Q9Y6F1 533 aa22.53■■□□□ 1.2
CLDND1-203ENST00000394181 GRIK5Q16478 980 aa22.53■■□□□ 1.2
CLDND1-203ENST00000394181 CYB5R4Q7L1T6 521 aa22.53■■□□□ 1.2
CLDND1-203ENST00000394181 TDRD7Q8NHU6 1098 aaKnown RBP22.53■■□□□ 1.2
CLDND1-203ENST00000394181 NEDD4P46934 1319 aa22.52■■□□□ 1.2
CLDND1-203ENST00000394181 PDS5AQ29RF7 1337 aaKnown RBP22.52■■□□□ 1.2
CLDND1-203ENST00000394181 WDR33Q9C0J8 1336 aaKnown RBP22.52■■□□□ 1.2
CLDND1-203ENST00000394181 SLC15A2Q16348 729 aa22.52■■□□□ 1.2
CLDND1-203ENST00000394181 STK11IPQ8N1F8 1099 aa22.52■■□□□ 1.2
CLDND1-203ENST00000394181 NCOA5Q9HCD5 579 aaKnown RBP22.52■■□□□ 1.2
CLDND1-203ENST00000394181 GGA1Q9UJY5 639 aa22.52■■□□□ 1.2
CLDND1-203ENST00000394181 NAP1L2Q9ULW6 460 aaPredicted RBP22.52■■□□□ 1.2
CLDND1-203ENST00000394181 MCM5P33992 734 aa22.52■■□□□ 1.2
CLDND1-203ENST00000394181 CCT2P78371 535 aaKnown RBP22.52■■□□□ 1.2
CLDND1-203ENST00000394181 RALYLQ86SE5 291 aaKnown RBP22.52■■□□□ 1.2
CLDND1-203ENST00000394181 TBC1D16Q8TBP0 767 aa22.52■■□□□ 1.2
CLDND1-203ENST00000394181 B4E1Z4 1266 aa22.51■■□□□ 1.19
CLDND1-203ENST00000394181 PPEF1O14829 653 aaPredicted RBP22.51■■□□□ 1.19
CLDND1-203ENST00000394181 PFKFB2O60825 505 aa22.51■■□□□ 1.19
CLDND1-203ENST00000394181 ZSCAN22P10073 491 aaPredicted RBP22.51■■□□□ 1.19
CLDND1-203ENST00000394181 PDIA3P30101 505 aaKnown RBP22.51■■□□□ 1.19
CLDND1-203ENST00000394181 TDO2P48775 406 aa22.51■■□□□ 1.19
CLDND1-203ENST00000394181 PDGFDQ9GZP0 370 aaPredicted RBP22.51■■□□□ 1.19
CLDND1-203ENST00000394181 BRPF3Q9ULD4 1205 aa22.51■■□□□ 1.19
CLDND1-203ENST00000394181 PPFIA3O75145 1194 aa22.5■■□□□ 1.19
CLDND1-203ENST00000394181 GNAT2P19087 354 aa22.5■■□□□ 1.19
CLDND1-203ENST00000394181 ATP2B4P23634 1241 aa22.5■■□□□ 1.19
CLDND1-203ENST00000394181 LMBRD1Q9NUN5 540 aa22.5■■□□□ 1.19
CLDND1-203ENST00000394181 MTMR6Q9Y217 621 aa22.5■■□□□ 1.19
CLDND1-203ENST00000394181 ZMYM6O95789 1325 aa22.5■■□□□ 1.19
CLDND1-203ENST00000394181 C15orf52Q6ZUT6 534 aaKnown RBP22.5■■□□□ 1.19
CLDND1-203ENST00000394181 NRXN2Q9P2S2 1712 aa22.5■■□□□ 1.19
CLDND1-203ENST00000394181 PRPF40AO75400 957 aaKnown RBP22.49■■□□□ 1.19
CLDND1-203ENST00000394181 CTDNEP1O95476 244 aa22.49■■□□□ 1.19
CLDND1-203ENST00000394181 ZNF804AQ7Z570 1209 aa22.49■■□□□ 1.19
CLDND1-203ENST00000394181 DEFB132Q7Z7B7 95 aa22.49■■□□□ 1.19
CLDND1-203ENST00000394181 RAB11FIP4Q86YS3 637 aa22.49■■□□□ 1.19
CLDND1-203ENST00000394181 CD209Q9NNX6 404 aa22.49■■□□□ 1.19
CLDND1-203ENST00000394181 PODXL2Q9NZ53 605 aa22.49■■□□□ 1.19
CLDND1-203ENST00000394181 LARP1BQ659C4 914 aaKnown RBP22.49■■□□□ 1.19
CLDND1-203ENST00000394181 SP8Q8IXZ3 490 aa22.49■■□□□ 1.19
CLDND1-203ENST00000394181 FBXL16Q8N461 479 aa22.49■■□□□ 1.19
CLDND1-203ENST00000394181 DDX11Q96FC9 970 aa22.49■■□□□ 1.19
CLDND1-203ENST00000394181 NACAP1Q9BZK3 213 aa22.49■■□□□ 1.19
CLDND1-203ENST00000394181 SENP2Q9HC62 589 aa22.49■■□□□ 1.19
CLDND1-203ENST00000394181 AATFQ9NY61 560 aaKnown RBP eCLIP22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms