RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 NYAP1Q6ZVC0 841 aa11.55□□□□□ -0.56
PSEN1-204ENST00000394164 CCAR2Q8N163 923 aaKnown RBP11.55□□□□□ -0.56
PSEN1-204ENST00000394164 SNW1Q13573 536 aaKnown RBP11.55□□□□□ -0.56
PSEN1-204ENST00000394164 SMIM5Q71RC9 77 aa11.55□□□□□ -0.56
PSEN1-204ENST00000394164 FAM177A1Q8N128 213 aaPredicted RBP11.55□□□□□ -0.56
PSEN1-204ENST00000394164 IQSEC3Q9UPP2 1182 aaPredicted RBP11.55□□□□□ -0.56
PSEN1-204ENST00000394164 GOLGB1Q14789 3259 aaKnown RBP11.55□□□□□ -0.56
PSEN1-204ENST00000394164 SOS2Q07890 1332 aaPredicted RBP11.55□□□□□ -0.56
PSEN1-204ENST00000394164 LOC102724159A0A0B4J2E5 919 aa11.54□□□□□ -0.56
PSEN1-204ENST00000394164 BECN2A8MW95 431 aa11.54□□□□□ -0.56
PSEN1-204ENST00000394164 CTDNEP1O95476 244 aa11.54□□□□□ -0.56
PSEN1-204ENST00000394164 POLR3DP05423 398 aaPredicted RBP11.54□□□□□ -0.56
PSEN1-204ENST00000394164 PWP2Q15269 919 aaKnown RBP11.54□□□□□ -0.56
PSEN1-204ENST00000394164 HOMER1Q86YM7 354 aa11.54□□□□□ -0.56
PSEN1-204ENST00000394164 TDRD7Q8NHU6 1098 aaKnown RBP11.54□□□□□ -0.56
PSEN1-204ENST00000394164 PGBD1Q96JS3 809 aa11.54□□□□□ -0.56
PSEN1-204ENST00000394164 ISCA1Q9BUE6 129 aa11.54□□□□□ -0.56
PSEN1-204ENST00000394164 TSPYL1Q9H0U9 437 aa11.54□□□□□ -0.56
PSEN1-204ENST00000394164 ADAMTS7Q9UKP4 1686 aa11.54□□□□□ -0.56
PSEN1-204ENST00000394164 FGAP02671 866 aa11.54□□□□□ -0.56
PSEN1-204ENST00000394164 TMCO3Q6UWJ1 677 aa11.54□□□□□ -0.56
PSEN1-204ENST00000394164 NUTM2BA6NNL0 878 aaPredicted RBP11.54□□□□□ -0.56
PSEN1-204ENST00000394164 NUTM2EB1AL46 878 aaPredicted RBP11.54□□□□□ -0.56
PSEN1-204ENST00000394164 ANKRD65E5RJM6 399 aa11.54□□□□□ -0.56
PSEN1-204ENST00000394164 MYO1CO00159 1063 aa11.54□□□□□ -0.56
PSEN1-204ENST00000394164 IRS4O14654 1257 aaPredicted RBP11.54□□□□□ -0.56
PSEN1-204ENST00000394164 GTF2A1P52655 376 aaPredicted RBP11.54□□□□□ -0.56
PSEN1-204ENST00000394164 CCZ1BP86790 482 aa11.54□□□□□ -0.56
PSEN1-204ENST00000394164 CCZ1P86791 482 aaPredicted RBP11.54□□□□□ -0.56
PSEN1-204ENST00000394164 SLC9C2Q5TAH2 1124 aa11.54□□□□□ -0.56
PSEN1-204ENST00000394164 NUTM2AQ8IVF1 878 aaPredicted RBP11.54□□□□□ -0.56
PSEN1-204ENST00000394164 NSUN7Q8NE18 718 aaKnown RBP11.54□□□□□ -0.56
PSEN1-204ENST00000394164 NKX2-3Q8TAU0 364 aa11.54□□□□□ -0.56
PSEN1-204ENST00000394164 HELLSQ9NRZ9 838 aa11.54□□□□□ -0.56
PSEN1-204ENST00000394164 H2AFXP16104 143 aaPredicted RBP11.53□□□□□ -0.56
PSEN1-204ENST00000394164 OAS2P29728 719 aaKnown RBP11.53□□□□□ -0.56
PSEN1-204ENST00000394164 MCAMP43121 646 aa11.53□□□□□ -0.56
PSEN1-204ENST00000394164 ZSCAN26Q16670 478 aa11.53□□□□□ -0.56
PSEN1-204ENST00000394164 LMAN1P49257 510 aa11.53□□□□□ -0.56
PSEN1-204ENST00000394164 TSGA10IPQ3SY00 556 aa11.53□□□□□ -0.56
PSEN1-204ENST00000394164 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.53□□□□□ -0.56
PSEN1-204ENST00000394164 NLRP10Q86W26 655 aa11.53□□□□□ -0.56
PSEN1-204ENST00000394164 SH3TC1Q8TE82 1336 aa11.53□□□□□ -0.56
PSEN1-204ENST00000394164 DHX16O60231 1041 aaKnown RBP11.52□□□□□ -0.56
PSEN1-204ENST00000394164 PDIA3P30101 505 aaKnown RBP11.52□□□□□ -0.56
PSEN1-204ENST00000394164 GNL2Q13823 731 aaKnown RBP11.52□□□□□ -0.56
PSEN1-204ENST00000394164 NKX1-1Q15270 411 aaPredicted RBP11.52□□□□□ -0.56
PSEN1-204ENST00000394164 ZBTB38Q8NAP3 1195 aaPredicted RBP11.52□□□□□ -0.56
PSEN1-204ENST00000394164 TTLL11Q8NHH1 800 aa11.52□□□□□ -0.56
PSEN1-204ENST00000394164 DCCP43146 1447 aa11.52□□□□□ -0.57
PSEN1-204ENST00000394164 MRC1P22897 1456 aa11.52□□□□□ -0.57
PSEN1-204ENST00000394164 GPAA1O43292 621 aa11.52□□□□□ -0.57
PSEN1-204ENST00000394164 PHKA1P46020 1223 aa11.52□□□□□ -0.57
PSEN1-204ENST00000394164 RESTQ13127 1097 aa11.52□□□□□ -0.57
PSEN1-204ENST00000394164 DZIP3Q86Y13 1208 aaKnown RBP11.52□□□□□ -0.57
PSEN1-204ENST00000394164 UBXN4Q92575 508 aa11.52□□□□□ -0.57
PSEN1-204ENST00000394164 SCAND2PQ9GZW5 306 aaPredicted RBP11.52□□□□□ -0.57
PSEN1-204ENST00000394164 CLSTN2Q9H4D0 955 aa11.52□□□□□ -0.57
PSEN1-204ENST00000394164 KLF18A0A0U1RQI7 1052 aa11.52□□□□□ -0.57
PSEN1-204ENST00000394164 EXOC5O00471 708 aa11.52□□□□□ -0.57
PSEN1-204ENST00000394164 PRC1O43663 620 aa11.52□□□□□ -0.57
PSEN1-204ENST00000394164 ME1P48163 572 aa11.52□□□□□ -0.57
PSEN1-204ENST00000394164 PTPN21Q16825 1174 aa11.52□□□□□ -0.57
PSEN1-204ENST00000394164 SKIDA1Q1XH10 827 aa11.52□□□□□ -0.57
PSEN1-204ENST00000394164 GIGYF2Q6Y7W6 1299 aaKnown RBP11.52□□□□□ -0.57
PSEN1-204ENST00000394164 GPATCH11Q8N954 259 aa11.52□□□□□ -0.57
PSEN1-204ENST00000394164 SEC31BQ9NQW1 1179 aa11.52□□□□□ -0.57
PSEN1-204ENST00000394164 DNAI1Q9UI46 699 aa11.52□□□□□ -0.57
PSEN1-204ENST00000394164 KCPQ6ZWJ8 1503 aa11.51□□□□□ -0.57
PSEN1-204ENST00000394164 ANKRD18BA2A2Z9 1011 aa11.51□□□□□ -0.57
PSEN1-204ENST00000394164 GOLGA8BA8MQT2 603 aa11.51□□□□□ -0.57
PSEN1-204ENST00000394164 FOXP2O15409 715 aa11.51□□□□□ -0.57
PSEN1-204ENST00000394164 PCCAP05165 728 aaPredicted RBP11.51□□□□□ -0.57
PSEN1-204ENST00000394164 TPM4P67936 248 aa11.51□□□□□ -0.57
PSEN1-204ENST00000394164 TXLNBQ8N3L3 684 aa11.51□□□□□ -0.57
PSEN1-204ENST00000394164 AIFM3Q96NN9 605 aa11.51□□□□□ -0.57
PSEN1-204ENST00000394164 USP28Q96RU2 1077 aa11.51□□□□□ -0.57
PSEN1-204ENST00000394164 MYL10Q9BUA6 226 aa11.51□□□□□ -0.57
PSEN1-204ENST00000394164 DSCC1Q9BVC3 393 aa11.51□□□□□ -0.57
PSEN1-204ENST00000394164 AKAP2Q9Y2D5 859 aa11.51□□□□□ -0.57
PSEN1-204ENST00000394164 MAP3K15Q6ZN16 1313 aa11.51□□□□□ -0.57
PSEN1-204ENST00000394164 PFKFB2O60825 505 aa11.51□□□□□ -0.57
PSEN1-204ENST00000394164 IMMTQ16891 758 aaKnown RBP11.51□□□□□ -0.57
PSEN1-204ENST00000394164 RALYLQ86SE5 291 aaKnown RBP11.51□□□□□ -0.57
PSEN1-204ENST00000394164 CCDC82Q8N4S0 544 aa11.51□□□□□ -0.57
PSEN1-204ENST00000394164 MNS1Q8NEH6 495 aa11.51□□□□□ -0.57
PSEN1-204ENST00000394164 PIH1D3Q9NQM4 214 aaKnown RBP11.51□□□□□ -0.57
PSEN1-204ENST00000394164 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.51□□□□□ -0.57
PSEN1-204ENST00000394164 WTIPA6NIX2 430 aaPredicted RBP11.5□□□□□ -0.57
PSEN1-204ENST00000394164 SASH3O75995 380 aa11.5□□□□□ -0.57
PSEN1-204ENST00000394164 URI1O94763 535 aaPredicted RBP11.5□□□□□ -0.57
PSEN1-204ENST00000394164 EXOSC10Q01780 885 aaKnown RBP11.5□□□□□ -0.57
PSEN1-204ENST00000394164 AOPEPQ8N6M6 819 aa11.5□□□□□ -0.57
PSEN1-204ENST00000394164 PPP1R13BQ96KQ4 1090 aa11.5□□□□□ -0.57
PSEN1-204ENST00000394164 DRC1Q96MC2 740 aa11.5□□□□□ -0.57
PSEN1-204ENST00000394164 SENP2Q9HC62 589 aa11.5□□□□□ -0.57
PSEN1-204ENST00000394164 JCADQ9P266 1359 aa11.5□□□□□ -0.57
PSEN1-204ENST00000394164 ZNF213O14771 459 aa11.5□□□□□ -0.57
PSEN1-204ENST00000394164 CPLX1O14810 134 aa11.5□□□□□ -0.57
PSEN1-204ENST00000394164 CIAO1O76071 339 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms