RNA–Protein interactions for RNA: ENST00000394055.7

CDH16-202, Transcript of cadherin 16, humanhuman

TSL 1 (best) BASIC

Gene CDH16, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-202ENST00000394055 IQSEC3Q9UPP2 1182 aaPredicted RBP17.22■□□□□ 0.35
CDH16-202ENST00000394055 TCRBV5S4A2TA0A5A2 114 aa17.21■□□□□ 0.35
CDH16-202ENST00000394055 RXRAP19793 462 aa17.21■□□□□ 0.35
CDH16-202ENST00000394055 TYRO3Q06418 890 aa17.21■□□□□ 0.35
CDH16-202ENST00000394055 TRDNQ13061 729 aa17.21■□□□□ 0.35
CDH16-202ENST00000394055 EVCP57679 992 aa17.21■□□□□ 0.35
CDH16-202ENST00000394055 FAM98CQ17RN3 349 aaKnown RBP17.21■□□□□ 0.35
CDH16-202ENST00000394055 PARP10Q53GL7 1025 aa17.21■□□□□ 0.35
CDH16-202ENST00000394055 CYB5R4Q7L1T6 521 aa17.21■□□□□ 0.35
CDH16-202ENST00000394055 LRP5O75197 1615 aa17.21■□□□□ 0.35
CDH16-202ENST00000394055 B4E1Z4 1266 aa17.2■□□□□ 0.34
CDH16-202ENST00000394055 CPLX1O14810 134 aa17.2■□□□□ 0.34
CDH16-202ENST00000394055 KDM4AO75164 1064 aa17.2■□□□□ 0.34
CDH16-202ENST00000394055 MBD4O95243 580 aa17.2■□□□□ 0.34
CDH16-202ENST00000394055 IGHMBP2P38935 993 aaKnown RBP17.2■□□□□ 0.34
CDH16-202ENST00000394055 ILDR1Q86SU0 546 aaPredicted RBP17.2■□□□□ 0.34
CDH16-202ENST00000394055 AK7Q96M32 723 aa17.2■□□□□ 0.34
CDH16-202ENST00000394055 ZNF830Q96NB3 372 aaPredicted RBP17.2■□□□□ 0.34
CDH16-202ENST00000394055 DDX19AQ9NUU7 478 aaKnown RBP17.2■□□□□ 0.34
CDH16-202ENST00000394055 AP5Z1O43299 807 aa17.2■□□□□ 0.34
CDH16-202ENST00000394055 FBXL16Q8N461 479 aa17.2■□□□□ 0.34
CDH16-202ENST00000394055 STRBPQ96SI9 672 aaKnown RBP17.2■□□□□ 0.34
CDH16-202ENST00000394055 CLSTN2Q9H4D0 955 aa17.2■□□□□ 0.34
CDH16-202ENST00000394055 ARMT1Q9H993 441 aa17.2■□□□□ 0.34
CDH16-202ENST00000394055 MRVI1Q9Y6F6 885 aa17.2■□□□□ 0.34
CDH16-202ENST00000394055 BICDL1Q6ZP65 573 aa17.2■□□□□ 0.34
CDH16-202ENST00000394055 SENP2Q9HC62 589 aa17.2■□□□□ 0.34
CDH16-202ENST00000394055 ORC3Q9UBD5 711 aaPredicted RBP17.2■□□□□ 0.34
CDH16-202ENST00000394055 ATRNO75882 1429 aa17.19■□□□□ 0.34
CDH16-202ENST00000394055 STK11IPQ8N1F8 1099 aa17.19■□□□□ 0.34
CDH16-202ENST00000394055 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.19■□□□□ 0.34
CDH16-202ENST00000394055 CHRNDQ07001 517 aa17.19■□□□□ 0.34
CDH16-202ENST00000394055 MAP3K12Q12852 859 aa17.19■□□□□ 0.34
CDH16-202ENST00000394055 CCDC144CPQ8IYA2 1237 aa17.19■□□□□ 0.34
CDH16-202ENST00000394055 C8orf76Q96K31 380 aa17.19■□□□□ 0.34
CDH16-202ENST00000394055 EPB41L4AQ9HCS5 686 aaPredicted RBP17.19■□□□□ 0.34
CDH16-202ENST00000394055 NEDD4P46934 1319 aa17.19■□□□□ 0.34
CDH16-202ENST00000394055 WTIPA6NIX2 430 aaPredicted RBP17.18■□□□□ 0.34
CDH16-202ENST00000394055 POLR3DP05423 398 aaPredicted RBP17.18■□□□□ 0.34
CDH16-202ENST00000394055 CTDSPL2Q05D32 466 aa17.18■□□□□ 0.34
CDH16-202ENST00000394055 C3orf67Q6ZVT6 689 aa17.18■□□□□ 0.34
CDH16-202ENST00000394055 LUZP1Q86V48 1076 aa17.18■□□□□ 0.34
CDH16-202ENST00000394055 PRKAB2O43741 272 aa17.18■□□□□ 0.34
CDH16-202ENST00000394055 ANO6Q4KMQ2 910 aa17.18■□□□□ 0.34
CDH16-202ENST00000394055 PTF1AQ7RTS3 328 aa17.18■□□□□ 0.34
CDH16-202ENST00000394055 COL4A1P02462 1669 aa17.17■□□□□ 0.34
CDH16-202ENST00000394055 DHX16O60231 1041 aaKnown RBP17.17■□□□□ 0.34
CDH16-202ENST00000394055 CCAR1Q8IX12 1150 aaKnown RBP17.17■□□□□ 0.34
CDH16-202ENST00000394055 LINC00116Q8NCU8 138 aa17.17■□□□□ 0.34
CDH16-202ENST00000394055 ZNF396Q96N95 335 aaPredicted RBP17.17■□□□□ 0.34
CDH16-202ENST00000394055 GOLPH3LQ9H4A5 285 aa17.17■□□□□ 0.34
CDH16-202ENST00000394055 RCOR1Q9UKL0 485 aa17.17■□□□□ 0.34
CDH16-202ENST00000394055 ANGEL1Q9UNK9 670 aaKnown RBP17.17■□□□□ 0.34
CDH16-202ENST00000394055 DDX60Q8IY21 1712 aaKnown RBP17.17■□□□□ 0.34
CDH16-202ENST00000394055 ME1P48163 572 aa17.17■□□□□ 0.34
CDH16-202ENST00000394055 ERFEQ4G0M1 354 aa17.17■□□□□ 0.34
CDH16-202ENST00000394055 MIGA1Q8NAN2 632 aa17.17■□□□□ 0.34
CDH16-202ENST00000394055 NAPBQ9H115 298 aa17.17■□□□□ 0.34
CDH16-202ENST00000394055 LTBP4Q8N2S1 1624 aa17.16■□□□□ 0.34
CDH16-202ENST00000394055 BARGINQ6ZT62 677 aa17.16■□□□□ 0.34
CDH16-202ENST00000394055 MICU3Q86XE3 530 aa17.16■□□□□ 0.34
CDH16-202ENST00000394055 IFNL3Q8IZI9 196 aa17.16■□□□□ 0.34
CDH16-202ENST00000394055 FAM200AQ8TCP9 573 aa17.16■□□□□ 0.34
CDH16-202ENST00000394055 AIFM3Q96NN9 605 aa17.16■□□□□ 0.34
CDH16-202ENST00000394055 MYL10Q9BUA6 226 aa17.16■□□□□ 0.34
CDH16-202ENST00000394055 ZNF500O60304 480 aaPredicted RBP17.16■□□□□ 0.34
CDH16-202ENST00000394055 SMARCC1Q92922 1105 aaPredicted RBP17.16■□□□□ 0.34
CDH16-202ENST00000394055 CHMP4CQ96CF2 233 aa17.16■□□□□ 0.34
CDH16-202ENST00000394055 TTC12Q9H892 705 aaPredicted RBP17.16■□□□□ 0.34
CDH16-202ENST00000394055 ZNF652Q9Y2D9 606 aa17.16■□□□□ 0.34
CDH16-202ENST00000394055 SH2B2O14492 632 aaPredicted RBP17.16■□□□□ 0.34
CDH16-202ENST00000394055 LCORLQ8N3X6 602 aa17.16■□□□□ 0.34
CDH16-202ENST00000394055 C8orf37Q96NL8 207 aa17.16■□□□□ 0.34
CDH16-202ENST00000394055 LRP2BPQ9P2M1 347 aa17.16■□□□□ 0.34
CDH16-202ENST00000394055 METAP2P50579 478 aaKnown RBP eCLIP17.15■□□□□ 0.34
CDH16-202ENST00000394055 SASS6Q6UVJ0 657 aa17.15■□□□□ 0.34
CDH16-202ENST00000394055 NFXL1Q6ZNB6 911 aa17.15■□□□□ 0.34
CDH16-202ENST00000394055 MYH15Q9Y2K3 1946 aa17.15■□□□□ 0.34
CDH16-202ENST00000394055 ARAP2Q8WZ64 1704 aa17.15■□□□□ 0.34
CDH16-202ENST00000394055 PATL2C9JE40 543 aaKnown RBP17.15■□□□□ 0.34
CDH16-202ENST00000394055 RRP12Q5JTH9 1297 aaKnown RBP17.15■□□□□ 0.34
CDH16-202ENST00000394055 SPC24Q8NBT2 197 aa17.15■□□□□ 0.34
CDH16-202ENST00000394055 DNAJC25Q9H1X3 360 aa17.15■□□□□ 0.34
CDH16-202ENST00000394055 CBX8Q9HC52 389 aa17.15■□□□□ 0.34
CDH16-202ENST00000394055 TOMM22Q9NS69 142 aa17.15■□□□□ 0.34
CDH16-202ENST00000394055 TACC3Q9Y6A5 838 aa17.15■□□□□ 0.34
CDH16-202ENST00000394055 OFD1O75665 1012 aa17.14■□□□□ 0.33
CDH16-202ENST00000394055 GYG1P46976 350 aa17.14■□□□□ 0.33
CDH16-202ENST00000394055 FBXO18Q8NFZ0 1043 aa17.14■□□□□ 0.33
CDH16-202ENST00000394055 PHKBQ93100 1093 aa17.14■□□□□ 0.33
CDH16-202ENST00000394055 ABCF2Q9UG63 623 aa17.14■□□□□ 0.33
CDH16-202ENST00000394055 WDR19Q8NEZ3 1342 aa17.14■□□□□ 0.33
CDH16-202ENST00000394055 A0A087WWV3 80 aa17.14■□□□□ 0.33
CDH16-202ENST00000394055 KIF28PB7ZC32 967 aa17.14■□□□□ 0.33
CDH16-202ENST00000394055 CDC27P30260 824 aa17.14■□□□□ 0.33
CDH16-202ENST00000394055 APOA5Q6Q788 366 aa17.14■□□□□ 0.33
CDH16-202ENST00000394055 RBM43Q6ZSC3 357 aaKnown RBP17.14■□□□□ 0.33
CDH16-202ENST00000394055 CLIC4Q9Y696 253 aa17.14■□□□□ 0.33
CDH16-202ENST00000394055 GSG1L2A8MUP6 293 aa17.13■□□□□ 0.33
CDH16-202ENST00000394055 GTF2E1P29083 439 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms