RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 AMOTL2Q9Y2J4 779 aa9.79□□□□□ -0.84
GABRA1-202ENST00000393943 GOLGA6L10A0A0M3HER8 536 aa9.79□□□□□ -0.84
GABRA1-202ENST00000393943 TACC1O75410 805 aa9.79□□□□□ -0.84
GABRA1-202ENST00000393943 UQCRFS1P1P0C7P4 283 aa9.79□□□□□ -0.84
GABRA1-202ENST00000393943 EIF4A1P60842 406 aaKnown RBP9.79□□□□□ -0.84
GABRA1-202ENST00000393943 ADCK5Q3MIX3 580 aa9.79□□□□□ -0.84
GABRA1-202ENST00000393943 IQSEC3Q9UPP2 1182 aaPredicted RBP9.79□□□□□ -0.84
GABRA1-202ENST00000393943 PPP2R5BQ15173 497 aa9.79□□□□□ -0.84
GABRA1-202ENST00000393943 KMT5BQ4FZB7 885 aa9.79□□□□□ -0.84
GABRA1-202ENST00000393943 RRP12Q5JTH9 1297 aaKnown RBP9.79□□□□□ -0.84
GABRA1-202ENST00000393943 CPLX3Q8WVH0 158 aa9.79□□□□□ -0.84
GABRA1-202ENST00000393943 LRRC2Q9BYS8 371 aa9.79□□□□□ -0.84
GABRA1-202ENST00000393943 CHD1O14646 1710 aa9.79□□□□□ -0.84
GABRA1-202ENST00000393943 GBP6Q6ZN66 633 aa9.79□□□□□ -0.84
GABRA1-202ENST00000393943 UBE3BQ7Z3V4 1068 aa9.79□□□□□ -0.84
GABRA1-202ENST00000393943 SRGAP1Q7Z6B7 1085 aa9.79□□□□□ -0.84
GABRA1-202ENST00000393943 CDK5RAP3Q96JB5 506 aa9.79□□□□□ -0.84
GABRA1-202ENST00000393943 FUCA2Q9BTY2 467 aa9.79□□□□□ -0.84
GABRA1-202ENST00000393943 ZSWIM4Q9H7M6 989 aa9.79□□□□□ -0.84
GABRA1-202ENST00000393943 PLEKHG1Q9ULL1 1385 aa9.78□□□□□ -0.84
GABRA1-202ENST00000393943 PPLO60437 1756 aa9.78□□□□□ -0.84
GABRA1-202ENST00000393943 PPP6R2O75170 966 aa9.78□□□□□ -0.84
GABRA1-202ENST00000393943 TAF5LO75529 589 aa9.78□□□□□ -0.84
GABRA1-202ENST00000393943 MARCKSP29966 332 aaPredicted RBP9.78□□□□□ -0.84
GABRA1-202ENST00000393943 C11orf57Q6ZUT1 292 aaPredicted RBP9.78□□□□□ -0.84
GABRA1-202ENST00000393943 ARHGEF40Q8TER5 1519 aa9.78□□□□□ -0.84
GABRA1-202ENST00000393943 ARHGAP25P42331 645 aa9.78□□□□□ -0.84
GABRA1-202ENST00000393943 SF3B2Q13435 895 aaKnown RBP9.78□□□□□ -0.84
GABRA1-202ENST00000393943 HSP90AB3PQ58FF7 597 aa9.78□□□□□ -0.84
GABRA1-202ENST00000393943 MICALL1Q8N3F8 863 aa9.78□□□□□ -0.84
GABRA1-202ENST00000393943 IGSF22Q8N9C0 903 aa9.78□□□□□ -0.84
GABRA1-202ENST00000393943 NUP133Q8WUM0 1156 aa9.78□□□□□ -0.84
GABRA1-202ENST00000393943 IP6K1Q92551 441 aa9.78□□□□□ -0.84
GABRA1-202ENST00000393943 PCDHA7Q9UN72 937 aa9.78□□□□□ -0.84
GABRA1-202ENST00000393943 TRIM75PA6NK02 468 aa9.78□□□□□ -0.84
GABRA1-202ENST00000393943 AMPD3Q01432 767 aa9.78□□□□□ -0.84
GABRA1-202ENST00000393943 PPFIA1Q13136 1202 aa9.78□□□□□ -0.84
GABRA1-202ENST00000393943 ESCO1Q5FWF5 840 aa9.78□□□□□ -0.84
GABRA1-202ENST00000393943 RBM43Q6ZSC3 357 aaKnown RBP9.78□□□□□ -0.84
GABRA1-202ENST00000393943 CCDC50Q8IVM0 306 aa9.78□□□□□ -0.84
GABRA1-202ENST00000393943 RGS22Q8NE09 1264 aa9.78□□□□□ -0.84
GABRA1-202ENST00000393943 CYP2C19P33261 490 aa9.77□□□□□ -0.84
GABRA1-202ENST00000393943 IFIT5Q13325 482 aaKnown RBP9.77□□□□□ -0.84
GABRA1-202ENST00000393943 KARSQ15046 597 aaKnown RBP9.77□□□□□ -0.84
GABRA1-202ENST00000393943 ODF2Q5BJF6 829 aa9.77□□□□□ -0.84
GABRA1-202ENST00000393943 EFCAB13Q8IY85 973 aa9.77□□□□□ -0.84
GABRA1-202ENST00000393943 RBM33Q96EV2 1170 aaKnown RBP9.77□□□□□ -0.84
GABRA1-202ENST00000393943 LZTFL1Q9NQ48 299 aa9.77□□□□□ -0.84
GABRA1-202ENST00000393943 CDC23Q9UJX2 597 aa9.77□□□□□ -0.84
GABRA1-202ENST00000393943 A0A0D9SFI3 127 aa9.77□□□□□ -0.85
GABRA1-202ENST00000393943 METTL24Q5JXM2 366 aa9.77□□□□□ -0.85
GABRA1-202ENST00000393943 ISM2Q6H9L7 571 aa9.77□□□□□ -0.85
GABRA1-202ENST00000393943 VPS37DQ86XT2 251 aa9.77□□□□□ -0.85
GABRA1-202ENST00000393943 METTL22Q9BUU2 404 aaPredicted RBP9.77□□□□□ -0.85
GABRA1-202ENST00000393943 SLC26A6Q9BXS9 759 aa9.77□□□□□ -0.85
GABRA1-202ENST00000393943 IDH1O75874 414 aaKnown RBP9.77□□□□□ -0.85
GABRA1-202ENST00000393943 PFKFB1P16118 471 aa9.77□□□□□ -0.85
GABRA1-202ENST00000393943 KIF5AQ12840 1032 aa9.77□□□□□ -0.85
GABRA1-202ENST00000393943 IFI16Q16666 785 aaKnown RBP9.77□□□□□ -0.85
GABRA1-202ENST00000393943 OTUD6BQ8N6M0 293 aa9.77□□□□□ -0.85
GABRA1-202ENST00000393943 PUF60Q9UHX1 559 aaKnown RBP9.77□□□□□ -0.85
GABRA1-202ENST00000393943 NFE2L3Q9Y4A8 694 aa9.77□□□□□ -0.85
GABRA1-202ENST00000393943 PTPRMP28827 1452 aa9.77□□□□□ -0.85
GABRA1-202ENST00000393943 KIF20BQ96Q89 1820 aa9.77□□□□□ -0.85
GABRA1-202ENST00000393943 A0A0G2JS52 829 aa9.77□□□□□ -0.85
GABRA1-202ENST00000393943 GNAT2P19087 354 aa9.77□□□□□ -0.85
GABRA1-202ENST00000393943 MUM1L1Q5H9M0 696 aa9.77□□□□□ -0.85
GABRA1-202ENST00000393943 MICU3Q86XE3 530 aa9.77□□□□□ -0.85
GABRA1-202ENST00000393943 IQCA1Q86XH1 822 aa9.77□□□□□ -0.85
GABRA1-202ENST00000393943 NSUN7Q8NE18 718 aaKnown RBP9.77□□□□□ -0.85
GABRA1-202ENST00000393943 FBXO18Q8NFZ0 1043 aa9.77□□□□□ -0.85
GABRA1-202ENST00000393943 NUP58Q9BVL2 599 aa9.77□□□□□ -0.85
GABRA1-202ENST00000393943 GPR108Q9NPR9 543 aa9.77□□□□□ -0.85
GABRA1-202ENST00000393943 JADE2Q9NQC1 790 aa9.77□□□□□ -0.85
GABRA1-202ENST00000393943 PSD3Q9NYI0 1048 aa9.77□□□□□ -0.85
GABRA1-202ENST00000393943 WWC3Q9ULE0 1092 aa9.77□□□□□ -0.85
GABRA1-202ENST00000393943 RTL9Q8NET4 1388 aa9.76□□□□□ -0.85
GABRA1-202ENST00000393943 PSMA7O14818 248 aa9.76□□□□□ -0.85
GABRA1-202ENST00000393943 RNMTO43148 476 aaKnown RBP9.76□□□□□ -0.85
GABRA1-202ENST00000393943 LARGE1O95461 756 aa9.76□□□□□ -0.85
GABRA1-202ENST00000393943 ERCC5P28715 1186 aaPredicted RBP9.76□□□□□ -0.85
GABRA1-202ENST00000393943 TFCP2Q12800 502 aa9.76□□□□□ -0.85
GABRA1-202ENST00000393943 ZRSR2Q15696 482 aaKnown RBP9.76□□□□□ -0.85
GABRA1-202ENST00000393943 RTN1Q16799 776 aa9.76□□□□□ -0.85
GABRA1-202ENST00000393943 NYAP1Q6ZVC0 841 aa9.76□□□□□ -0.85
GABRA1-202ENST00000393943 IFNL2Q8IZJ0 200 aa9.76□□□□□ -0.85
GABRA1-202ENST00000393943 HAUS7Q99871 368 aa9.76□□□□□ -0.85
GABRA1-202ENST00000393943 LRRC27Q9C0I9 530 aa9.76□□□□□ -0.85
GABRA1-202ENST00000393943 ANGEL1Q9UNK9 670 aaKnown RBP9.76□□□□□ -0.85
GABRA1-202ENST00000393943 LUC7L2Q9Y383 392 aaKnown RBP9.76□□□□□ -0.85
GABRA1-202ENST00000393943 SH3TC1Q8TE82 1336 aa9.76□□□□□ -0.85
GABRA1-202ENST00000393943 CAMSAP1Q5T5Y3 1602 aa9.76□□□□□ -0.85
GABRA1-202ENST00000393943 ALKQ9UM73 1620 aa9.76□□□□□ -0.85
GABRA1-202ENST00000393943 NF2P35240 595 aa9.76□□□□□ -0.85
GABRA1-202ENST00000393943 VAV2P52735 878 aa9.76□□□□□ -0.85
GABRA1-202ENST00000393943 HNRNPH2P55795 449 aaKnown RBP9.76□□□□□ -0.85
GABRA1-202ENST00000393943 POSTNQ15063 836 aa9.76□□□□□ -0.85
GABRA1-202ENST00000393943 LONRF2Q1L5Z9 754 aa9.76□□□□□ -0.85
GABRA1-202ENST00000393943 MFSD6Q6ZSS7 791 aa9.76□□□□□ -0.85
GABRA1-202ENST00000393943 CATIPQ7Z7H3 387 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms