RNA–Protein interactions for RNA: ENST00000393560.5

LAMB1-203, Transcript of laminin subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene LAMB1, Length 2,806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-203ENST00000393560 STAG2Q8N3U4 1231 aa13.02□□□□□ -0.33
LAMB1-203ENST00000393560 DUSP9Q99956 384 aaKnown RBP13.02□□□□□ -0.33
LAMB1-203ENST00000393560 RABL2AQ9UBK7 228 aaPredicted RBP13.02□□□□□ -0.33
LAMB1-203ENST00000393560 PCDHGC5Q9Y5F6 944 aa13.02□□□□□ -0.33
LAMB1-203ENST00000393560 F8VZ95 297 aa13.02□□□□□ -0.33
LAMB1-203ENST00000393560 GNL2Q13823 731 aaKnown RBP13.02□□□□□ -0.33
LAMB1-203ENST00000393560 CCDC144BQ3MJ40 725 aa13.02□□□□□ -0.33
LAMB1-203ENST00000393560 SDCCAG8Q86SQ7 713 aaPredicted RBP13.02□□□□□ -0.33
LAMB1-203ENST00000393560 USP48Q86UV5 1035 aa13.02□□□□□ -0.33
LAMB1-203ENST00000393560 CCDC144CPQ8IYA2 1237 aa13.02□□□□□ -0.33
LAMB1-203ENST00000393560 SYCP3Q8IZU3 236 aa13.02□□□□□ -0.33
LAMB1-203ENST00000393560 BICD2Q8TD16 824 aa13.02□□□□□ -0.33
LAMB1-203ENST00000393560 RBM41Q96IZ5 413 aaKnown RBP13.02□□□□□ -0.33
LAMB1-203ENST00000393560 UBAP1Q9NZ09 502 aa13.02□□□□□ -0.33
LAMB1-203ENST00000393560 AATKQ6ZMQ8 1374 aa13.02□□□□□ -0.33
LAMB1-203ENST00000393560 TULP4Q9NRJ4 1543 aa13.01□□□□□ -0.33
LAMB1-203ENST00000393560 TXNDC2Q86VQ3 553 aa13.01□□□□□ -0.33
LAMB1-203ENST00000393560 SCLT1Q96NL6 688 aa13.01□□□□□ -0.33
LAMB1-203ENST00000393560 SYNRGQ9UMZ2 1314 aa13.01□□□□□ -0.33
LAMB1-203ENST00000393560 ARHGEF28Q8N1W1 1705 aaKnown RBP13.01□□□□□ -0.33
LAMB1-203ENST00000393560 OPA1O60313 960 aa13.01□□□□□ -0.33
LAMB1-203ENST00000393560 EVCP57679 992 aa13.01□□□□□ -0.33
LAMB1-203ENST00000393560 SNW1Q13573 536 aaKnown RBP13.01□□□□□ -0.33
LAMB1-203ENST00000393560 MFN1Q8IWA4 741 aa13.01□□□□□ -0.33
LAMB1-203ENST00000393560 KCNN1Q92952 543 aa13.01□□□□□ -0.33
LAMB1-203ENST00000393560 LNPKQ9C0E8 428 aa13.01□□□□□ -0.33
LAMB1-203ENST00000393560 KLC4Q9NSK0 619 aa13.01□□□□□ -0.33
LAMB1-203ENST00000393560 CTDP1Q9Y5B0 961 aaPredicted RBP13.01□□□□□ -0.33
LAMB1-203ENST00000393560 SPATA31D1Q6ZQQ2 1576 aa13□□□□□ -0.33
LAMB1-203ENST00000393560 AHCYL1O43865 530 aa13□□□□□ -0.33
LAMB1-203ENST00000393560 PAPOLAP51003 745 aaKnown RBP13□□□□□ -0.33
LAMB1-203ENST00000393560 DEUP1Q05D60 604 aa13□□□□□ -0.33
LAMB1-203ENST00000393560 LONRF2Q1L5Z9 754 aa13□□□□□ -0.33
LAMB1-203ENST00000393560 CCAR2Q8N163 923 aaKnown RBP13□□□□□ -0.33
LAMB1-203ENST00000393560 CDK19Q9BWU1 502 aa13□□□□□ -0.33
LAMB1-203ENST00000393560 USP26Q9BXU7 913 aa13□□□□□ -0.33
LAMB1-203ENST00000393560 SLC39A2Q9NP94 309 aa13□□□□□ -0.33
LAMB1-203ENST00000393560 ALKQ9UM73 1620 aa13□□□□□ -0.33
LAMB1-203ENST00000393560 TNRQ92752 1358 aa13□□□□□ -0.33
LAMB1-203ENST00000393560 RNF8O76064 485 aa13□□□□□ -0.33
LAMB1-203ENST00000393560 FESP07332 822 aa13□□□□□ -0.33
LAMB1-203ENST00000393560 INSRP06213 1382 aa12.99□□□□□ -0.33
LAMB1-203ENST00000393560 FNTAP49354 379 aa12.99□□□□□ -0.33
LAMB1-203ENST00000393560 KBTBD12Q3ZCT8 623 aa12.99□□□□□ -0.33
LAMB1-203ENST00000393560 GOLGA6L19H0YKK7 550 aa12.99□□□□□ -0.33
LAMB1-203ENST00000393560 TADA3O75528 432 aa12.99□□□□□ -0.33
LAMB1-203ENST00000393560 SESN3P58005 492 aa12.99□□□□□ -0.33
LAMB1-203ENST00000393560 EXOSC9Q06265 439 aaKnown RBP12.99□□□□□ -0.33
LAMB1-203ENST00000393560 TTLL7Q6ZT98 887 aa12.99□□□□□ -0.33
LAMB1-203ENST00000393560 LRRC8AQ8IWT6 810 aa12.99□□□□□ -0.33
LAMB1-203ENST00000393560 MAB21L3Q8N8X9 362 aa12.99□□□□□ -0.33
LAMB1-203ENST00000393560 CARD6Q9BX69 1037 aa12.99□□□□□ -0.33
LAMB1-203ENST00000393560 GGNBP2Q9H3C7 697 aa12.99□□□□□ -0.33
LAMB1-203ENST00000393560 KRT38O76015 456 aa12.98□□□□□ -0.33
LAMB1-203ENST00000393560 CCDC175P0C221 793 aa12.98□□□□□ -0.33
LAMB1-203ENST00000393560 FLT3P36888 993 aa12.98□□□□□ -0.33
LAMB1-203ENST00000393560 GALNT17Q6IS24 598 aa12.98□□□□□ -0.33
LAMB1-203ENST00000393560 OLFML1Q6UWY5 402 aa12.98□□□□□ -0.33
LAMB1-203ENST00000393560 ARHGAP27Q6ZUM4 889 aa12.98□□□□□ -0.33
LAMB1-203ENST00000393560 LUZP1Q86V48 1076 aa12.98□□□□□ -0.33
LAMB1-203ENST00000393560 RSRC1Q96IZ7 334 aaKnown RBP12.98□□□□□ -0.33
LAMB1-203ENST00000393560 FUCA2Q9BTY2 467 aa12.98□□□□□ -0.33
LAMB1-203ENST00000393560 UBA5Q9GZZ9 404 aa12.98□□□□□ -0.33
LAMB1-203ENST00000393560 PTPRMP28827 1452 aa12.98□□□□□ -0.33
LAMB1-203ENST00000393560 APBB1O00213 710 aa12.98□□□□□ -0.33
LAMB1-203ENST00000393560 E2F6O75461 281 aa12.98□□□□□ -0.33
LAMB1-203ENST00000393560 ZNF75DP51815 510 aa12.98□□□□□ -0.33
LAMB1-203ENST00000393560 Q4G0T1 1027 aa12.98□□□□□ -0.33
LAMB1-203ENST00000393560 AMOTL1Q8IY63 956 aa12.98□□□□□ -0.33
LAMB1-203ENST00000393560 FAM204AQ9H8W3 233 aa12.98□□□□□ -0.33
LAMB1-203ENST00000393560 ATP6V0A4Q9HBG4 840 aa12.98□□□□□ -0.33
LAMB1-203ENST00000393560 PAPOLBQ9NRJ5 636 aaKnown RBP12.98□□□□□ -0.33
LAMB1-203ENST00000393560 CABP1Q9NZU7 370 aa12.98□□□□□ -0.33
LAMB1-203ENST00000393560 N6AMT1Q9Y5N5 214 aa12.98□□□□□ -0.33
LAMB1-203ENST00000393560 METP08581 1390 aa12.98□□□□□ -0.33
LAMB1-203ENST00000393560 PDHBP11177 359 aa12.98□□□□□ -0.33
LAMB1-203ENST00000393560 GNPTABQ3T906 1256 aa12.98□□□□□ -0.33
LAMB1-203ENST00000393560 HSP90B2PQ58FF3 399 aa12.98□□□□□ -0.33
LAMB1-203ENST00000393560 MEX3CQ5U5Q3 659 aaKnown RBP12.98□□□□□ -0.33
LAMB1-203ENST00000393560 CEP112Q8N8E3 955 aa12.98□□□□□ -0.33
LAMB1-203ENST00000393560 CCDC102AQ96A19 550 aa12.98□□□□□ -0.33
LAMB1-203ENST00000393560 RABEP2Q9H5N1 569 aa12.98□□□□□ -0.33
LAMB1-203ENST00000393560 TPCN1Q9ULQ1 816 aa12.98□□□□□ -0.33
LAMB1-203ENST00000393560 ZNF394Q53GI3 561 aa12.97□□□□□ -0.33
LAMB1-203ENST00000393560 MIS18BP1Q6P0N0 1132 aa12.97□□□□□ -0.33
LAMB1-203ENST00000393560 CUL5Q93034 780 aa12.97□□□□□ -0.33
LAMB1-203ENST00000393560 MAP2K7O14733 419 aa12.97□□□□□ -0.33
LAMB1-203ENST00000393560 CYP27B1O15528 508 aa12.97□□□□□ -0.33
LAMB1-203ENST00000393560 XAGE2Q96GT9 111 aa12.97□□□□□ -0.33
LAMB1-203ENST00000393560 ALS2CR12Q96Q35 445 aa12.97□□□□□ -0.33
LAMB1-203ENST00000393560 BATF3Q9NR55 127 aa12.97□□□□□ -0.33
LAMB1-203ENST00000393560 PUF60Q9UHX1 559 aaKnown RBP12.97□□□□□ -0.33
LAMB1-203ENST00000393560 THRAP3Q9Y2W1 955 aaKnown RBP12.97□□□□□ -0.33
LAMB1-203ENST00000393560 A0A1W2PP64 1363 aa12.97□□□□□ -0.33
LAMB1-203ENST00000393560 EFCAB8A8MWE9 144 aa12.96□□□□□ -0.33
LAMB1-203ENST00000393560 KIF5CO60282 957 aa12.96□□□□□ -0.33
LAMB1-203ENST00000393560 GNAT1P11488 350 aa12.96□□□□□ -0.33
LAMB1-203ENST00000393560 TRPC1P48995 793 aa12.96□□□□□ -0.33
LAMB1-203ENST00000393560 ROR2Q01974 943 aaKnown RBP12.96□□□□□ -0.33
LAMB1-203ENST00000393560 ADCY1Q08828 1119 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms