RNA–Protein interactions for RNA: ENST00000392745.6

TRAF3-203, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 2,459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-203ENST00000392745 TCEANC2Q96MN5 208 aa21.55■■□□□ 1.04
TRAF3-203ENST00000392745 SETDB2Q96T68 719 aa21.55■■□□□ 1.04
TRAF3-203ENST00000392745 NUP62CLQ9H1M0 184 aa21.55■■□□□ 1.04
TRAF3-203ENST00000392745 TPCN1Q9ULQ1 816 aa21.55■■□□□ 1.04
TRAF3-203ENST00000392745 C4BP0C0L5 1744 aa21.54■■□□□ 1.04
TRAF3-203ENST00000392745 HSPD1P10809 573 aaKnown RBP21.54■■□□□ 1.04
TRAF3-203ENST00000392745 ARID4AP29374 1257 aaPredicted RBP21.54■■□□□ 1.04
TRAF3-203ENST00000392745 SLC10A5Q5PT55 438 aa21.54■■□□□ 1.04
TRAF3-203ENST00000392745 LARP1BQ659C4 914 aaKnown RBP21.54■■□□□ 1.04
TRAF3-203ENST00000392745 ARAP2Q8WZ64 1704 aa21.54■■□□□ 1.04
TRAF3-203ENST00000392745 GTF2E1P29083 439 aaPredicted RBP21.54■■□□□ 1.04
TRAF3-203ENST00000392745 LRMPQ12912 555 aa21.54■■□□□ 1.04
TRAF3-203ENST00000392745 DSCC1Q9BVC3 393 aa21.54■■□□□ 1.04
TRAF3-203ENST00000392745 KRT85P78386 507 aa21.53■■□□□ 1.04
TRAF3-203ENST00000392745 CHRNDQ07001 517 aa21.53■■□□□ 1.04
TRAF3-203ENST00000392745 BLOC1S2Q6QNY1 142 aa21.53■■□□□ 1.04
TRAF3-203ENST00000392745 FAM196AQ6ZSG2 479 aa21.53■■□□□ 1.04
TRAF3-203ENST00000392745 CCDC186Q7Z3E2 898 aa21.53■■□□□ 1.04
TRAF3-203ENST00000392745 BRWD3Q6RI45 1802 aa21.53■■□□□ 1.04
TRAF3-203ENST00000392745 A0A0G2JLW4 131 aa21.53■■□□□ 1.04
TRAF3-203ENST00000392745 SLC5A1P13866 664 aa21.53■■□□□ 1.04
TRAF3-203ENST00000392745 RPS6KB1P23443 525 aa21.53■■□□□ 1.04
TRAF3-203ENST00000392745 NRBP1Q9UHY1 535 aa21.53■■□□□ 1.04
TRAF3-203ENST00000392745 ZFYP08048 801 aaPredicted RBP21.52■■□□□ 1.04
TRAF3-203ENST00000392745 WASHC4Q2M389 1173 aa21.52■■□□□ 1.04
TRAF3-203ENST00000392745 CCDC24Q8N4L8 307 aa21.52■■□□□ 1.04
TRAF3-203ENST00000392745 PUS7LQ9H0K6 701 aaKnown RBP21.52■■□□□ 1.04
TRAF3-203ENST00000392745 PIH1D3Q9NQM4 214 aaKnown RBP21.52■■□□□ 1.04
TRAF3-203ENST00000392745 CDC5LQ99459 802 aaKnown RBP21.52■■□□□ 1.04
TRAF3-203ENST00000392745 CBX8Q9HC52 389 aa21.52■■□□□ 1.04
TRAF3-203ENST00000392745 LRRFIP1Q32MZ4 808 aaKnown RBP21.51■■□□□ 1.03
TRAF3-203ENST00000392745 ANO6Q4KMQ2 910 aa21.51■■□□□ 1.03
TRAF3-203ENST00000392745 TRAPPC3LQ5T215 181 aa21.51■■□□□ 1.03
TRAF3-203ENST00000392745 NBPF5PQ86XG9 351 aaPredicted RBP21.51■■□□□ 1.03
TRAF3-203ENST00000392745 DACT1Q9NYF0 836 aa21.51■■□□□ 1.03
TRAF3-203ENST00000392745 C4AP0C0L4 1744 aa21.51■■□□□ 1.03
TRAF3-203ENST00000392745 FOXP2O15409 715 aa21.51■■□□□ 1.03
TRAF3-203ENST00000392745 UQCRFS1P1P0C7P4 283 aa21.51■■□□□ 1.03
TRAF3-203ENST00000392745 GTPBP4Q9BZE4 634 aaKnown RBP21.51■■□□□ 1.03
TRAF3-203ENST00000392745 WTIPA6NIX2 430 aaPredicted RBP21.5■■□□□ 1.03
TRAF3-203ENST00000392745 STOX1Q6ZVD7 989 aa21.5■■□□□ 1.03
TRAF3-203ENST00000392745 APPBP2Q92624 585 aa21.5■■□□□ 1.03
TRAF3-203ENST00000392745 C16orf45Q96MC5 204 aaPredicted RBP21.5■■□□□ 1.03
TRAF3-203ENST00000392745 NEK1Q96PY6 1258 aa21.5■■□□□ 1.03
TRAF3-203ENST00000392745 NYXQ9GZU5 481 aa21.5■■□□□ 1.03
TRAF3-203ENST00000392745 TNMDQ9H2S6 317 aa21.5■■□□□ 1.03
TRAF3-203ENST00000392745 TFIP11Q9UBB9 837 aaKnown RBP21.5■■□□□ 1.03
TRAF3-203ENST00000392745 COL24A1Q17RW2 1714 aa21.5■■□□□ 1.03
TRAF3-203ENST00000392745 RFC4P35249 363 aa21.5■■□□□ 1.03
TRAF3-203ENST00000392745 BCAMP50895 628 aa21.5■■□□□ 1.03
TRAF3-203ENST00000392745 TOB2Q14106 344 aaPredicted RBP21.5■■□□□ 1.03
TRAF3-203ENST00000392745 KRT32Q14532 448 aa21.5■■□□□ 1.03
TRAF3-203ENST00000392745 KRT27Q7Z3Y8 459 aa21.5■■□□□ 1.03
TRAF3-203ENST00000392745 ANKRD18AQ8IVF6 992 aa21.5■■□□□ 1.03
TRAF3-203ENST00000392745 RASGRF1Q13972 1273 aa21.49■■□□□ 1.03
TRAF3-203ENST00000392745 DRC7Q8IY82 874 aa21.49■■□□□ 1.03
TRAF3-203ENST00000392745 CELF1Q92879 486 aaKnown RBP21.49■■□□□ 1.03
TRAF3-203ENST00000392745 ALDH8A1Q9H2A2 487 aaPredicted RBP21.49■■□□□ 1.03
TRAF3-203ENST00000392745 LAMA4Q16363 1823 aa21.49■■□□□ 1.03
TRAF3-203ENST00000392745 ELP1O95163 1332 aa21.49■■□□□ 1.03
TRAF3-203ENST00000392745 ADD2P35612 726 aa21.49■■□□□ 1.03
TRAF3-203ENST00000392745 NCBP1Q09161 790 aaKnown RBP21.49■■□□□ 1.03
TRAF3-203ENST00000392745 TTF1Q15361 905 aaPredicted RBP21.49■■□□□ 1.03
TRAF3-203ENST00000392745 SLC9C2Q5TAH2 1124 aa21.49■■□□□ 1.03
TRAF3-203ENST00000392745 SPATA5Q8NB90 893 aa21.49■■□□□ 1.03
TRAF3-203ENST00000392745 TRIM37O94972 964 aa21.48■■□□□ 1.03
TRAF3-203ENST00000392745 TTLL5Q6EMB2 1281 aa21.48■■□□□ 1.03
TRAF3-203ENST00000392745 TPTE2Q6XPS3 522 aa21.48■■□□□ 1.03
TRAF3-203ENST00000392745 BSDC1Q9NW68 430 aaPredicted RBP21.48■■□□□ 1.03
TRAF3-203ENST00000392745 IDH1O75874 414 aaKnown RBP21.48■■□□□ 1.03
TRAF3-203ENST00000392745 TRIM5Q9C035 493 aa21.48■■□□□ 1.03
TRAF3-203ENST00000392745 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.48■■□□□ 1.03
TRAF3-203ENST00000392745 NLRP3Q96P20 1036 aa21.47■■□□□ 1.03
TRAF3-203ENST00000392745 ZNF75DP51815 510 aa21.47■■□□□ 1.03
TRAF3-203ENST00000392745 A0A1B0GUL6 1792 aa21.46■■□□□ 1.03
TRAF3-203ENST00000392745 IGSF3O75054 1194 aa21.46■■□□□ 1.03
TRAF3-203ENST00000392745 ZSCAN25Q6NSZ9 544 aa21.46■■□□□ 1.03
TRAF3-203ENST00000392745 PLA2G4DQ86XP0 818 aa21.46■■□□□ 1.03
TRAF3-203ENST00000392745 SPATA32Q96LK8 384 aa21.46■■□□□ 1.03
TRAF3-203ENST00000392745 WWC3Q9ULE0 1092 aa21.46■■□□□ 1.03
TRAF3-203ENST00000392745 MINPP1Q9UNW1 487 aa21.46■■□□□ 1.03
TRAF3-203ENST00000392745 GOLGA6L4A6NEF3 574 aa21.46■■□□□ 1.03
TRAF3-203ENST00000392745 GPAA1O43292 621 aa21.46■■□□□ 1.03
TRAF3-203ENST00000392745 NAA30Q147X3 362 aaPredicted RBP21.45■■□□□ 1.02
TRAF3-203ENST00000392745 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.45■■□□□ 1.02
TRAF3-203ENST00000392745 FGAP02671 866 aa21.45■■□□□ 1.02
TRAF3-203ENST00000392745 NFIXQ14938 502 aa21.45■■□□□ 1.02
TRAF3-203ENST00000392745 ANKRD1Q15327 319 aa21.45■■□□□ 1.02
TRAF3-203ENST00000392745 LEO1Q8WVC0 666 aaPredicted RBP21.45■■□□□ 1.02
TRAF3-203ENST00000392745 UBR3Q6ZT12 1888 aa21.45■■□□□ 1.02
TRAF3-203ENST00000392745 ZNF532Q9HCE3 1301 aa21.44■■□□□ 1.02
TRAF3-203ENST00000392745 TCRBV5S4A2TA0A5A2 114 aa21.44■■□□□ 1.02
TRAF3-203ENST00000392745 NR1I2O75469 434 aa21.44■■□□□ 1.02
TRAF3-203ENST00000392745 TNNT1P13805 278 aa21.44■■□□□ 1.02
TRAF3-203ENST00000392745 PDE6AP16499 860 aa21.44■■□□□ 1.02
TRAF3-203ENST00000392745 UBE3CQ15386 1083 aa21.44■■□□□ 1.02
TRAF3-203ENST00000392745 E7EWF7 191 aa21.44■■□□□ 1.02
TRAF3-203ENST00000392745 PDCP20941 246 aa21.44■■□□□ 1.02
TRAF3-203ENST00000392745 TM4SF1P30408 202 aa21.44■■□□□ 1.02
TRAF3-203ENST00000392745 RPS8P62241 208 aaKnown RBP21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms