RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 COL11A2P13942 1736 aaPredicted RBP13.57□□□□□ -0.24
SMARCAL1-203ENST00000392128 IGSF3O75054 1194 aa13.57□□□□□ -0.24
SMARCAL1-203ENST00000392128 BRD1O95696 1058 aa13.57□□□□□ -0.24
SMARCAL1-203ENST00000392128 MMP10P09238 476 aa13.57□□□□□ -0.24
SMARCAL1-203ENST00000392128 CYP7A1P22680 504 aa13.57□□□□□ -0.24
SMARCAL1-203ENST00000392128 ATP2B4P23634 1241 aa13.57□□□□□ -0.24
SMARCAL1-203ENST00000392128 GPSM2P81274 684 aa13.57□□□□□ -0.24
SMARCAL1-203ENST00000392128 EZH2Q15910 746 aaKnown RBP13.57□□□□□ -0.24
SMARCAL1-203ENST00000392128 PARP3Q9Y6F1 533 aa13.57□□□□□ -0.24
SMARCAL1-203ENST00000392128 TIAM2Q8IVF5 1701 aa13.57□□□□□ -0.24
SMARCAL1-203ENST00000392128 APPP05067 770 aa13.56□□□□□ -0.24
SMARCAL1-203ENST00000392128 HAND2P61296 217 aa13.56□□□□□ -0.24
SMARCAL1-203ENST00000392128 SLC15A2Q16348 729 aa13.56□□□□□ -0.24
SMARCAL1-203ENST00000392128 SLC51AQ86UW1 340 aa13.56□□□□□ -0.24
SMARCAL1-203ENST00000392128 ARMT1Q9H993 441 aa13.56□□□□□ -0.24
SMARCAL1-203ENST00000392128 SMC3Q9UQE7 1217 aa13.56□□□□□ -0.24
SMARCAL1-203ENST00000392128 DUOX1Q9NRD9 1551 aa13.56□□□□□ -0.24
SMARCAL1-203ENST00000392128 EN1Q05925 392 aaPredicted RBP13.56□□□□□ -0.24
SMARCAL1-203ENST00000392128 ZNF804AQ7Z570 1209 aa13.56□□□□□ -0.24
SMARCAL1-203ENST00000392128 LCORLQ8N3X6 602 aa13.56□□□□□ -0.24
SMARCAL1-203ENST00000392128 SALL1Q9NSC2 1324 aa13.56□□□□□ -0.24
SMARCAL1-203ENST00000392128 GSG1L2A8MUP6 293 aa13.55□□□□□ -0.24
SMARCAL1-203ENST00000392128 BAG4O95429 457 aaKnown RBP13.55□□□□□ -0.24
SMARCAL1-203ENST00000392128 SRGNP10124 158 aa13.55□□□□□ -0.24
SMARCAL1-203ENST00000392128 NPR1P16066 1061 aa13.55□□□□□ -0.24
SMARCAL1-203ENST00000392128 PTMSP20962 102 aa13.55□□□□□ -0.24
SMARCAL1-203ENST00000392128 PDE6BP35913 854 aa13.55□□□□□ -0.24
SMARCAL1-203ENST00000392128 ADGRA1Q86SQ6 560 aa13.55□□□□□ -0.24
SMARCAL1-203ENST00000392128 IFNL3Q8IZI9 196 aa13.55□□□□□ -0.24
SMARCAL1-203ENST00000392128 TDRD7Q8NHU6 1098 aaKnown RBP13.55□□□□□ -0.24
SMARCAL1-203ENST00000392128 NCOA7Q8NI08 942 aa13.55□□□□□ -0.24
SMARCAL1-203ENST00000392128 NBPF3Q9H094 633 aa13.55□□□□□ -0.24
SMARCAL1-203ENST00000392128 EPB41L4AQ9HCS5 686 aaPredicted RBP13.55□□□□□ -0.24
SMARCAL1-203ENST00000392128 GGA1Q9UJY5 639 aa13.55□□□□□ -0.24
SMARCAL1-203ENST00000392128 NSFL1CQ9UNZ2 370 aaKnown RBP13.55□□□□□ -0.24
SMARCAL1-203ENST00000392128 WDR19Q8NEZ3 1342 aa13.55□□□□□ -0.24
SMARCAL1-203ENST00000392128 NAA16Q6N069 864 aaPredicted RBP13.55□□□□□ -0.24
SMARCAL1-203ENST00000392128 SP8Q8IXZ3 490 aa13.55□□□□□ -0.24
SMARCAL1-203ENST00000392128 MB21D2Q8IYB1 491 aaPredicted RBP13.55□□□□□ -0.24
SMARCAL1-203ENST00000392128 NECAB1Q8N987 351 aa13.55□□□□□ -0.24
SMARCAL1-203ENST00000392128 NSUN4Q96CB9 384 aaKnown RBP13.55□□□□□ -0.24
SMARCAL1-203ENST00000392128 STK32BQ9NY57 414 aa13.55□□□□□ -0.24
SMARCAL1-203ENST00000392128 MAGEB6P1A0A0J9YX57 407 aa13.54□□□□□ -0.24
SMARCAL1-203ENST00000392128 PPEF1O14829 653 aaPredicted RBP13.54□□□□□ -0.24
SMARCAL1-203ENST00000392128 UFL1O94874 794 aa13.54□□□□□ -0.24
SMARCAL1-203ENST00000392128 FGD1P98174 961 aa13.54□□□□□ -0.24
SMARCAL1-203ENST00000392128 MIGA1Q8NAN2 632 aa13.54□□□□□ -0.24
SMARCAL1-203ENST00000392128 ZNF384Q8TF68 577 aa13.54□□□□□ -0.24
SMARCAL1-203ENST00000392128 BRF1Q92994 677 aa13.54□□□□□ -0.24
SMARCAL1-203ENST00000392128 GTF3C6Q969F1 213 aa13.54□□□□□ -0.24
SMARCAL1-203ENST00000392128 NACAP1Q9BZK3 213 aa13.54□□□□□ -0.24
SMARCAL1-203ENST00000392128 NAPBQ9H115 298 aa13.54□□□□□ -0.24
SMARCAL1-203ENST00000392128 SLC4A4Q9Y6R1 1079 aa13.54□□□□□ -0.24
SMARCAL1-203ENST00000392128 WDR33Q9C0J8 1336 aaKnown RBP13.54□□□□□ -0.24
SMARCAL1-203ENST00000392128 GJB2P29033 226 aa13.54□□□□□ -0.24
SMARCAL1-203ENST00000392128 MCM5P33992 734 aa13.54□□□□□ -0.24
SMARCAL1-203ENST00000392128 SPTY2D1Q68D10 685 aaPredicted RBP13.54□□□□□ -0.24
SMARCAL1-203ENST00000392128 RALYLQ86SE5 291 aaKnown RBP13.54□□□□□ -0.24
SMARCAL1-203ENST00000392128 WDR66Q8TBY9 1149 aa13.54□□□□□ -0.24
SMARCAL1-203ENST00000392128 RIOK1Q9BRS2 568 aaKnown RBP13.54□□□□□ -0.24
SMARCAL1-203ENST00000392128 LRRC2Q9BYS8 371 aa13.54□□□□□ -0.24
SMARCAL1-203ENST00000392128 ATP6V0A2Q9Y487 856 aa13.54□□□□□ -0.24
SMARCAL1-203ENST00000392128 ALDH1B1P30837 517 aa13.53□□□□□ -0.24
SMARCAL1-203ENST00000392128 CHAF1AQ13111 956 aaPredicted RBP13.53□□□□□ -0.24
SMARCAL1-203ENST00000392128 MSL1Q68DK7 614 aa13.53□□□□□ -0.24
SMARCAL1-203ENST00000392128 TBC1D10CQ8IV04 446 aa13.53□□□□□ -0.24
SMARCAL1-203ENST00000392128 GOLGA6L22H0YM25 854 aa13.53□□□□□ -0.24
SMARCAL1-203ENST00000392128 PRKAB2O43741 272 aa13.53□□□□□ -0.24
SMARCAL1-203ENST00000392128 PDIA4P13667 645 aaKnown RBP13.53□□□□□ -0.24
SMARCAL1-203ENST00000392128 EVCP57679 992 aa13.53□□□□□ -0.24
SMARCAL1-203ENST00000392128 MECOMQ03112 1051 aa13.53□□□□□ -0.24
SMARCAL1-203ENST00000392128 TRDNQ13061 729 aa13.53□□□□□ -0.24
SMARCAL1-203ENST00000392128 TBC1D16Q8TBP0 767 aa13.53□□□□□ -0.24
SMARCAL1-203ENST00000392128 PFKFB2O60825 505 aa13.52□□□□□ -0.24
SMARCAL1-203ENST00000392128 IL1R1P14778 569 aa13.52□□□□□ -0.24
SMARCAL1-203ENST00000392128 MASTLQ96GX5 879 aa13.52□□□□□ -0.24
SMARCAL1-203ENST00000392128 PRC1O43663 620 aa13.52□□□□□ -0.25
SMARCAL1-203ENST00000392128 STX6O43752 255 aa13.52□□□□□ -0.25
SMARCAL1-203ENST00000392128 SYT1P21579 422 aa13.52□□□□□ -0.25
SMARCAL1-203ENST00000392128 PRDX5P30044 214 aa13.52□□□□□ -0.25
SMARCAL1-203ENST00000392128 TDO2P48775 406 aa13.52□□□□□ -0.25
SMARCAL1-203ENST00000392128 ZNF274Q96GC6 653 aaPredicted RBP13.52□□□□□ -0.25
SMARCAL1-203ENST00000392128 POLLQ9UGP5 575 aa13.52□□□□□ -0.25
SMARCAL1-203ENST00000392128 BAG6P46379 1132 aa13.51□□□□□ -0.25
SMARCAL1-203ENST00000392128 ANTXR2P58335 489 aa13.51□□□□□ -0.25
SMARCAL1-203ENST00000392128 APOBRQ0VD83 1088 aa13.51□□□□□ -0.25
SMARCAL1-203ENST00000392128 STK3Q13188 491 aa13.51□□□□□ -0.25
SMARCAL1-203ENST00000392128 SF3B2Q13435 895 aaKnown RBP13.51□□□□□ -0.25
SMARCAL1-203ENST00000392128 CHST3Q7LGC8 479 aa13.51□□□□□ -0.25
SMARCAL1-203ENST00000392128 GPR101Q96P66 508 aaPredicted RBP13.51□□□□□ -0.25
SMARCAL1-203ENST00000392128 CD209Q9NNX6 404 aa13.51□□□□□ -0.25
SMARCAL1-203ENST00000392128 LLPHQ9BRT6 129 aaKnown RBP13.51□□□□□ -0.25
SMARCAL1-203ENST00000392128 TRAK2O60296 914 aa13.5□□□□□ -0.25
SMARCAL1-203ENST00000392128 ZSCAN22P10073 491 aaPredicted RBP13.5□□□□□ -0.25
SMARCAL1-203ENST00000392128 SCRN1Q12765 414 aa13.5□□□□□ -0.25
SMARCAL1-203ENST00000392128 GIMAP6Q6P9H5 292 aa13.5□□□□□ -0.25
SMARCAL1-203ENST00000392128 STAG1Q8WVM7 1258 aa13.5□□□□□ -0.25
SMARCAL1-203ENST00000392128 CHMP4CQ96CF2 233 aa13.5□□□□□ -0.25
SMARCAL1-203ENST00000392128 CNNM2Q9H8M5 875 aa13.5□□□□□ -0.25
SMARCAL1-203ENST00000392128 BAZ2AQ9UIF9 1905 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms