RNA–Protein interactions for RNA: ENST00000390964.1

SNORA40.3-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 122 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.3-201ENST00000390964 LOC100289279A0A1B0GTE1 492 aa6.6□□□□□ -1.35
SNORA40.3-201ENST00000390964 GLB1P16278 677 aa6.6□□□□□ -1.35
SNORA40.3-201ENST00000390964 EAPPQ56P03 285 aaPredicted RBP6.6□□□□□ -1.35
SNORA40.3-201ENST00000390964 SETDB2Q96T68 719 aa6.6□□□□□ -1.35
SNORA40.3-201ENST00000390964 RUSC1Q9BVN2 902 aa6.6□□□□□ -1.35
SNORA40.3-201ENST00000390964 PRPF40AO75400 957 aaKnown RBP6.59□□□□□ -1.35
SNORA40.3-201ENST00000390964 UVSSAQ2YD98 709 aa6.59□□□□□ -1.35
SNORA40.3-201ENST00000390964 EXOSC6Q5RKV6 272 aaKnown RBP6.59□□□□□ -1.35
SNORA40.3-201ENST00000390964 ANKRD34AQ69YU3 496 aa6.59□□□□□ -1.35
SNORA40.3-201ENST00000390964 NPAS4Q8IUM7 802 aa6.59□□□□□ -1.35
SNORA40.3-201ENST00000390964 UBL7Q96S82 380 aaPredicted RBP6.59□□□□□ -1.35
SNORA40.3-201ENST00000390964 USP26Q9BXU7 913 aa6.59□□□□□ -1.35
SNORA40.3-201ENST00000390964 TMPRSS13Q9BYE2 586 aa6.59□□□□□ -1.35
SNORA40.3-201ENST00000390964 OSBPL7Q9BZF2 842 aa6.59□□□□□ -1.35
SNORA40.3-201ENST00000390964 ZBTB7CA1YPR0 619 aa6.58□□□□□ -1.36
SNORA40.3-201ENST00000390964 DYRK3O43781 588 aa6.58□□□□□ -1.36
SNORA40.3-201ENST00000390964 GSTT1P30711 240 aa6.58□□□□□ -1.36
SNORA40.3-201ENST00000390964 FAAP100Q0VG06 881 aa6.58□□□□□ -1.36
SNORA40.3-201ENST00000390964 AP3B2Q13367 1082 aa6.58□□□□□ -1.36
SNORA40.3-201ENST00000390964 POU4F3Q15319 338 aa6.58□□□□□ -1.36
SNORA40.3-201ENST00000390964 HP1BP3Q5SSJ5 553 aaPredicted RBP6.58□□□□□ -1.36
SNORA40.3-201ENST00000390964 C3orf58Q8NDZ4 430 aa6.58□□□□□ -1.36
SNORA40.3-201ENST00000390964 TRIM56Q9BRZ2 755 aaKnown RBP6.58□□□□□ -1.36
SNORA40.3-201ENST00000390964 SUGCTQ9HAC7 445 aa6.58□□□□□ -1.36
SNORA40.3-201ENST00000390964 MAOBP27338 520 aa6.57□□□□□ -1.36
SNORA40.3-201ENST00000390964 PPP2R3AQ06190 1150 aa6.57□□□□□ -1.36
SNORA40.3-201ENST00000390964 NUTM2GQ5VZR2 741 aa6.57□□□□□ -1.36
SNORA40.3-201ENST00000390964 PRR23CQ6ZRP0 262 aa6.57□□□□□ -1.36
SNORA40.3-201ENST00000390964 SMG8Q8ND04 991 aaKnown RBP6.57□□□□□ -1.36
SNORA40.3-201ENST00000390964 ANKRD24Q8TF21 1146 aa6.57□□□□□ -1.36
SNORA40.3-201ENST00000390964 FAM46AQ96IP4 442 aaKnown RBP6.57□□□□□ -1.36
SNORA40.3-201ENST00000390964 SEMA6BQ9H3T3 888 aa6.57□□□□□ -1.36
SNORA40.3-201ENST00000390964 C12orf49Q9H741 205 aa6.57□□□□□ -1.36
SNORA40.3-201ENST00000390964 CYP4F12Q9HCS2 524 aa6.57□□□□□ -1.36
SNORA40.3-201ENST00000390964 TMEM39AQ9NV64 488 aa6.57□□□□□ -1.36
SNORA40.3-201ENST00000390964 PPM1HQ9ULR3 514 aa6.57□□□□□ -1.36
SNORA40.3-201ENST00000390964 AKAP2Q9Y2D5 859 aa6.57□□□□□ -1.36
SNORA40.3-201ENST00000390964 DLGAP3O95886 979 aa6.56□□□□□ -1.36
SNORA40.3-201ENST00000390964 GNA15P30679 374 aa6.56□□□□□ -1.36
SNORA40.3-201ENST00000390964 FDX2Q6P4F2 183 aa6.56□□□□□ -1.36
SNORA40.3-201ENST00000390964 ARMC10Q8N2F6 343 aa6.56□□□□□ -1.36
SNORA40.3-201ENST00000390964 Q8N3U1 123 aa6.56□□□□□ -1.36
SNORA40.3-201ENST00000390964 CORO1BQ9BR76 489 aa6.56□□□□□ -1.36
SNORA40.3-201ENST00000390964 FAM8A1Q9UBU6 413 aa6.56□□□□□ -1.36
SNORA40.3-201ENST00000390964 SART1O43290 800 aaKnown RBP6.55□□□□□ -1.36
SNORA40.3-201ENST00000390964 MYRFLQ96LU7 910 aa6.55□□□□□ -1.36
SNORA40.3-201ENST00000390964 PSMG3-AS1Q96PY0 264 aa6.55□□□□□ -1.36
SNORA40.3-201ENST00000390964 GPN3Q9UHW5 284 aaPredicted RBP6.55□□□□□ -1.36
SNORA40.3-201ENST00000390964 HIF3AQ9Y2N7 669 aa6.55□□□□□ -1.36
SNORA40.3-201ENST00000390964 AK5Q9Y6K8 562 aa6.55□□□□□ -1.36
SNORA40.3-201ENST00000390964 SYNGAP1Q96PV0 1343 aa6.54□□□□□ -1.36
SNORA40.3-201ENST00000390964 DHX15O43143 795 aaKnown RBP6.54□□□□□ -1.36
SNORA40.3-201ENST00000390964 TIAF1O95411 115 aa6.54□□□□□ -1.36
SNORA40.3-201ENST00000390964 CTSBP07858 339 aa6.54□□□□□ -1.36
SNORA40.3-201ENST00000390964 PREPP48147 710 aa6.54□□□□□ -1.36
SNORA40.3-201ENST00000390964 ZNF157P51786 506 aaPredicted RBP6.54□□□□□ -1.36
SNORA40.3-201ENST00000390964 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.54□□□□□ -1.36
SNORA40.3-201ENST00000390964 FBXO33Q7Z6M2 555 aa6.54□□□□□ -1.36
SNORA40.3-201ENST00000390964 SLC51AQ86UW1 340 aa6.54□□□□□ -1.36
SNORA40.3-201ENST00000390964 C12orf50Q8NA57 414 aaPredicted RBP6.54□□□□□ -1.36
SNORA40.3-201ENST00000390964 UTP4Q969X6 686 aaKnown RBP6.54□□□□□ -1.36
SNORA40.3-201ENST00000390964 NECAB3Q96P71 396 aaPredicted RBP6.54□□□□□ -1.36
SNORA40.3-201ENST00000390964 DUSP9Q99956 384 aaKnown RBP6.54□□□□□ -1.36
SNORA40.3-201ENST00000390964 CEP44Q9C0F1 390 aa6.54□□□□□ -1.36
SNORA40.3-201ENST00000390964 RAXQ9Y2V3 346 aa6.54□□□□□ -1.36
SNORA40.3-201ENST00000390964 USP17L7P0C7H9 530 aa6.53□□□□□ -1.36
SNORA40.3-201ENST00000390964 EIF4BP23588 611 aaKnown RBP6.53□□□□□ -1.36
SNORA40.3-201ENST00000390964 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.52□□□□□ -1.37
SNORA40.3-201ENST00000390964 ECEL1O95672 775 aa6.52□□□□□ -1.37
SNORA40.3-201ENST00000390964 GSTP1P09211 210 aaKnown RBP6.52□□□□□ -1.37
SNORA40.3-201ENST00000390964 NME2P22392 152 aa6.52□□□□□ -1.37
SNORA40.3-201ENST00000390964 ITGB7P26010 798 aa6.52□□□□□ -1.37
SNORA40.3-201ENST00000390964 HNRNPUQ00839 825 aaKnown RBP eCLIP6.52□□□□□ -1.37
SNORA40.3-201ENST00000390964 SOX4Q06945 474 aaPredicted RBP6.52□□□□□ -1.37
SNORA40.3-201ENST00000390964 PRSS36Q5K4E3 855 aa6.52□□□□□ -1.37
SNORA40.3-201ENST00000390964 TMCO4Q5TGY1 634 aa6.52□□□□□ -1.37
SNORA40.3-201ENST00000390964 FAM20CQ8IXL6 584 aa6.52□□□□□ -1.37
SNORA40.3-201ENST00000390964 EMILIN2Q9BXX0 1053 aa6.52□□□□□ -1.37
SNORA40.3-201ENST00000390964 KRTAP9-2Q9BYQ4 174 aa6.52□□□□□ -1.37
SNORA40.3-201ENST00000390964 KRT82Q9NSB4 513 aa6.52□□□□□ -1.37
SNORA40.3-201ENST00000390964 PARP2Q9UGN5 583 aa6.52□□□□□ -1.37
SNORA40.3-201ENST00000390964 ENC1O14682 589 aa6.51□□□□□ -1.37
SNORA40.3-201ENST00000390964 GAS2O43903 313 aaKnown RBP6.51□□□□□ -1.37
SNORA40.3-201ENST00000390964 BMP3P12645 472 aa6.51□□□□□ -1.37
SNORA40.3-201ENST00000390964 ARNTP27540 789 aa6.51□□□□□ -1.37
SNORA40.3-201ENST00000390964 DAB2P98082 770 aa6.51□□□□□ -1.37
SNORA40.3-201ENST00000390964 PDE3AQ14432 1141 aa6.51□□□□□ -1.37
SNORA40.3-201ENST00000390964 TPTE2Q6XPS3 522 aa6.51□□□□□ -1.37
SNORA40.3-201ENST00000390964 PDZD3Q86UT5 571 aa6.51□□□□□ -1.37
SNORA40.3-201ENST00000390964 CLEC10AQ8IUN9 316 aa6.51□□□□□ -1.37
SNORA40.3-201ENST00000390964 SULF2Q8IWU5 870 aa6.51□□□□□ -1.37
SNORA40.3-201ENST00000390964 RAD18Q9NS91 495 aa6.51□□□□□ -1.37
SNORA40.3-201ENST00000390964 STOML1Q9UBI4 398 aa6.51□□□□□ -1.37
SNORA40.3-201ENST00000390964 SAMM50Q9Y512 469 aa6.51□□□□□ -1.37
SNORA40.3-201ENST00000390964 GSC2O15499 205 aa6.5□□□□□ -1.37
SNORA40.3-201ENST00000390964 AOC2O75106 756 aa6.5□□□□□ -1.37
SNORA40.3-201ENST00000390964 ADH5P11766 374 aa6.5□□□□□ -1.37
SNORA40.3-201ENST00000390964 DRD2P14416 443 aa6.5□□□□□ -1.37
SNORA40.3-201ENST00000390964 XPCQ01831 940 aaPredicted RBP6.5□□□□□ -1.37
SNORA40.3-201ENST00000390964 TMC4Q7Z404 712 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms