RNA–Protein interactions for RNA: ENST00000390426.2

TRAV4-201, Transcript of T cell receptor alpha variable 4, humanhuman

APPRIS P1 BASIC

Gene TRAV4, Length 395 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4-201ENST00000390426 NOB1Q9ULX3 412 aaKnown RBP13.41□□□□□ -0.26
TRAV4-201ENST00000390426 MANSC4A6NHS7 340 aaPredicted RBP13.4□□□□□ -0.26
TRAV4-201ENST00000390426 EYA2O00167 538 aa13.4□□□□□ -0.26
TRAV4-201ENST00000390426 IFIT1P09914 478 aaKnown RBP13.4□□□□□ -0.26
TRAV4-201ENST00000390426 FGFR2P21802 821 aa13.4□□□□□ -0.26
TRAV4-201ENST00000390426 GJA5P36382 358 aa13.4□□□□□ -0.26
TRAV4-201ENST00000390426 SOX10P56693 466 aa13.4□□□□□ -0.26
TRAV4-201ENST00000390426 TNFAIP1Q13829 316 aa13.4□□□□□ -0.26
TRAV4-201ENST00000390426 IFNL1Q8IU54 200 aa13.4□□□□□ -0.26
TRAV4-201ENST00000390426 CDAN1Q8IWY9 1227 aa13.4□□□□□ -0.26
TRAV4-201ENST00000390426 TBC1D22AQ8WUA7 517 aa13.4□□□□□ -0.26
TRAV4-201ENST00000390426 FKTNO75072 461 aa13.39□□□□□ -0.27
TRAV4-201ENST00000390426 UBTFL1P0CB47 393 aaPredicted RBP13.39□□□□□ -0.27
TRAV4-201ENST00000390426 ZBTB48P10074 688 aaPredicted RBP13.39□□□□□ -0.27
TRAV4-201ENST00000390426 CACNB3P54284 484 aa13.39□□□□□ -0.27
TRAV4-201ENST00000390426 INHBEP58166 350 aa13.39□□□□□ -0.27
TRAV4-201ENST00000390426 PUM3Q15397 648 aaKnown RBP13.39□□□□□ -0.27
TRAV4-201ENST00000390426 ANKRD13AQ8IZ07 590 aa13.39□□□□□ -0.27
TRAV4-201ENST00000390426 TEPSINQ96N21 525 aa13.39□□□□□ -0.27
TRAV4-201ENST00000390426 TMEM39BQ9GZU3 492 aa13.39□□□□□ -0.27
TRAV4-201ENST00000390426 SIL1Q9H173 461 aa13.39□□□□□ -0.27
TRAV4-201ENST00000390426 ELP3Q9H9T3 547 aa13.39□□□□□ -0.27
TRAV4-201ENST00000390426 HPS5Q9UPZ3 1129 aa13.39□□□□□ -0.27
TRAV4-201ENST00000390426 ECM29Q5VYK3 1845 aa13.39□□□□□ -0.27
TRAV4-201ENST00000390426 UNCXA6NJT0 531 aa13.38□□□□□ -0.27
TRAV4-201ENST00000390426 IGF2BP3O00425 579 aaKnown RBP eCLIP13.38□□□□□ -0.27
TRAV4-201ENST00000390426 ALDH1A1P00352 501 aa13.38□□□□□ -0.27
TRAV4-201ENST00000390426 SLC5A1P13866 664 aa13.38□□□□□ -0.27
TRAV4-201ENST00000390426 TNNI2P48788 182 aa13.38□□□□□ -0.27
TRAV4-201ENST00000390426 HDLBPQ00341 1268 aaKnown RBP13.38□□□□□ -0.27
TRAV4-201ENST00000390426 PKN2Q16513 984 aaKnown RBP13.38□□□□□ -0.27
TRAV4-201ENST00000390426 NOM1Q5C9Z4 860 aaKnown RBP13.38□□□□□ -0.27
TRAV4-201ENST00000390426 ATG9AQ7Z3C6 839 aa13.38□□□□□ -0.27
TRAV4-201ENST00000390426 TEKT1Q969V4 418 aa13.38□□□□□ -0.27
TRAV4-201ENST00000390426 CFHR5Q9BXR6 569 aa13.38□□□□□ -0.27
TRAV4-201ENST00000390426 API5Q9BZZ5 524 aaKnown RBP13.38□□□□□ -0.27
TRAV4-201ENST00000390426 CT47B1P0C2W7 299 aaPredicted RBP13.37□□□□□ -0.27
TRAV4-201ENST00000390426 LPIN2Q92539 896 aa13.37□□□□□ -0.27
TRAV4-201ENST00000390426 KIF16BQ96L93 1317 aa13.37□□□□□ -0.27
TRAV4-201ENST00000390426 CCER2I3L3R5 266 aa13.36□□□□□ -0.27
TRAV4-201ENST00000390426 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.36□□□□□ -0.27
TRAV4-201ENST00000390426 CNKSR2Q8WXI2 1034 aa13.36□□□□□ -0.27
TRAV4-201ENST00000390426 OPTNQ96CV9 577 aa13.36□□□□□ -0.27
TRAV4-201ENST00000390426 ZDHHC15Q96MV8 337 aa13.36□□□□□ -0.27
TRAV4-201ENST00000390426 MRIQ9BWK5 157 aa13.36□□□□□ -0.27
TRAV4-201ENST00000390426 CEP126Q9P2H0 1117 aa13.36□□□□□ -0.27
TRAV4-201ENST00000390426 PA2G4Q9UQ80 394 aaKnown RBP13.36□□□□□ -0.27
TRAV4-201ENST00000390426 LRRFIP2Q9Y608 721 aaKnown RBP13.36□□□□□ -0.27
TRAV4-201ENST00000390426 RARSP54136 660 aaKnown RBP13.35□□□□□ -0.27
TRAV4-201ENST00000390426 MAP3K9P80192 1104 aa13.35□□□□□ -0.27
TRAV4-201ENST00000390426 ATP2B3Q16720 1220 aa13.35□□□□□ -0.27
TRAV4-201ENST00000390426 OTUD7BQ6GQQ9 843 aa13.35□□□□□ -0.27
TRAV4-201ENST00000390426 APOBEC3HQ6NTF7 200 aaKnown RBP13.35□□□□□ -0.27
TRAV4-201ENST00000390426 FBXO46Q6PJ61 603 aaPredicted RBP13.35□□□□□ -0.27
TRAV4-201ENST00000390426 WDR66Q8TBY9 1149 aa13.35□□□□□ -0.27
TRAV4-201ENST00000390426 MEIS3Q99687 375 aa13.35□□□□□ -0.27
TRAV4-201ENST00000390426 PTPN18Q99952 460 aa13.35□□□□□ -0.27
TRAV4-201ENST00000390426 TMOD2Q9NZR1 351 aa13.35□□□□□ -0.27
TRAV4-201ENST00000390426 SUGT1Q9Y2Z0 365 aa13.35□□□□□ -0.27
TRAV4-201ENST00000390426 MAST3O60307 1309 aa13.35□□□□□ -0.27
TRAV4-201ENST00000390426 ARAP2Q8WZ64 1704 aa13.34□□□□□ -0.27
TRAV4-201ENST00000390426 CIAO1O76071 339 aa13.34□□□□□ -0.27
TRAV4-201ENST00000390426 VGLL4Q14135 290 aa13.34□□□□□ -0.27
TRAV4-201ENST00000390426 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.34□□□□□ -0.27
TRAV4-201ENST00000390426 TESPA1A2RU30 521 aaPredicted RBP13.33□□□□□ -0.28
TRAV4-201ENST00000390426 CRHR2Q13324 411 aa13.33□□□□□ -0.28
TRAV4-201ENST00000390426 HHIPL2Q6UWX4 724 aa13.33□□□□□ -0.28
TRAV4-201ENST00000390426 OTUD5Q96G74 571 aa13.33□□□□□ -0.28
TRAV4-201ENST00000390426 MS4A4AQ96JQ5 239 aa13.33□□□□□ -0.28
TRAV4-201ENST00000390426 FBXO3Q9UK99 471 aa13.33□□□□□ -0.28
TRAV4-201ENST00000390426 HDAC5Q9UQL6 1122 aa13.33□□□□□ -0.28
TRAV4-201ENST00000390426 TRIM17Q9Y577 477 aa13.33□□□□□ -0.28
TRAV4-201ENST00000390426 CSADQ9Y600 493 aa13.33□□□□□ -0.28
TRAV4-201ENST00000390426 PRDX5P30044 214 aa13.32□□□□□ -0.28
TRAV4-201ENST00000390426 IL15P40933 162 aaPredicted RBP13.32□□□□□ -0.28
TRAV4-201ENST00000390426 PHKA1P46020 1223 aa13.32□□□□□ -0.28
TRAV4-201ENST00000390426 DIXDC1Q155Q3 683 aa13.32□□□□□ -0.28
TRAV4-201ENST00000390426 FKBP1CQ5VVH2 108 aa13.32□□□□□ -0.28
TRAV4-201ENST00000390426 FAM83AQ86UY5 434 aa13.32□□□□□ -0.28
TRAV4-201ENST00000390426 CD99L2Q8TCZ2 262 aa13.32□□□□□ -0.28
TRAV4-201ENST00000390426 BRI3BPQ8WY22 251 aa13.32□□□□□ -0.28
TRAV4-201ENST00000390426 WRNIP1Q96S55 665 aa13.32□□□□□ -0.28
TRAV4-201ENST00000390426 GNL3LQ9NVN8 582 aaKnown RBP13.32□□□□□ -0.28
TRAV4-201ENST00000390426 CCL15-CCL14A0A0B4J2E2 113 aa13.31□□□□□ -0.28
TRAV4-201ENST00000390426 LDHBP07195 334 aaKnown RBP13.31□□□□□ -0.28
TRAV4-201ENST00000390426 ADORA1P30542 326 aa13.31□□□□□ -0.28
TRAV4-201ENST00000390426 GTF2A2P52657 109 aa13.31□□□□□ -0.28
TRAV4-201ENST00000390426 CCL15Q16663 113 aa13.31□□□□□ -0.28
TRAV4-201ENST00000390426 INTS3Q68E01 1043 aaKnown RBP13.31□□□□□ -0.28
TRAV4-201ENST00000390426 CDC42EP5Q6NZY7 148 aa13.31□□□□□ -0.28
TRAV4-201ENST00000390426 OTOP1Q7RTM1 612 aa13.31□□□□□ -0.28
TRAV4-201ENST00000390426 ARHGAP45Q92619 1136 aa13.31□□□□□ -0.28
TRAV4-201ENST00000390426 ZKSCAN4Q969J2 545 aaPredicted RBP13.31□□□□□ -0.28
TRAV4-201ENST00000390426 ERO1AQ96HE7 468 aa13.31□□□□□ -0.28
TRAV4-201ENST00000390426 COPRSQ9NQ92 184 aa13.31□□□□□ -0.28
TRAV4-201ENST00000390426 TNNQ9UQP3 1299 aa13.31□□□□□ -0.28
TRAV4-201ENST00000390426 DAGLAQ9Y4D2 1042 aa13.31□□□□□ -0.28
TRAV4-201ENST00000390426 SNCAIPQ9Y6H5 919 aa13.31□□□□□ -0.28
TRAV4-201ENST00000390426 SPDYE5A6NIY4 337 aa13.3□□□□□ -0.28
TRAV4-201ENST00000390426 GNAI3P08754 354 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms