RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 VGLL4Q14135 290 aa27.16■■□□□ 1.94
CNEP1R1-201ENST00000389134 LDHAL6AQ6ZMR3 332 aa27.16■■□□□ 1.94
CNEP1R1-201ENST00000389134 DZIP1LQ8IYY4 767 aaKnown RBP27.16■■□□□ 1.94
CNEP1R1-201ENST00000389134 CNKSR2Q8WXI2 1034 aa27.16■■□□□ 1.94
CNEP1R1-201ENST00000389134 KIF22Q14807 665 aa27.15■■□□□ 1.94
CNEP1R1-201ENST00000389134 CCDC27Q2M243 656 aa27.15■■□□□ 1.94
CNEP1R1-201ENST00000389134 CCDC57Q2TAC2 916 aa27.15■■□□□ 1.94
CNEP1R1-201ENST00000389134 TAF7LQ5H9L4 462 aa27.15■■□□□ 1.94
CNEP1R1-201ENST00000389134 FAM43AQ8N2R8 423 aa27.15■■□□□ 1.94
CNEP1R1-201ENST00000389134 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.15■■□□□ 1.94
CNEP1R1-201ENST00000389134 TDRD7Q8NHU6 1098 aaKnown RBP27.15■■□□□ 1.94
CNEP1R1-201ENST00000389134 LMBR1LQ6UX01 489 aa27.14■■□□□ 1.94
CNEP1R1-201ENST00000389134 OTUD5Q96G74 571 aa27.14■■□□□ 1.94
CNEP1R1-201ENST00000389134 ZCCHC17Q9NP64 241 aaKnown RBP27.14■■□□□ 1.94
CNEP1R1-201ENST00000389134 CNNM1Q9NRU3 951 aa27.14■■□□□ 1.94
CNEP1R1-201ENST00000389134 TCP10L2B9ZVM9 353 aa27.13■■□□□ 1.93
CNEP1R1-201ENST00000389134 TLR2O60603 784 aa27.13■■□□□ 1.93
CNEP1R1-201ENST00000389134 GNRH1P01148 92 aa27.13■■□□□ 1.93
CNEP1R1-201ENST00000389134 UBE4AQ14139 1066 aa27.13■■□□□ 1.93
CNEP1R1-201ENST00000389134 CDAN1Q8IWY9 1227 aa27.13■■□□□ 1.93
CNEP1R1-201ENST00000389134 TMEM39BQ9GZU3 492 aa27.13■■□□□ 1.93
CNEP1R1-201ENST00000389134 ZSWIM8A7E2V4 1837 aa27.13■■□□□ 1.93
CNEP1R1-201ENST00000389134 H0YGN5 161 aa27.12■■□□□ 1.93
CNEP1R1-201ENST00000389134 HIBADHP31937 336 aaKnown RBP27.12■■□□□ 1.93
CNEP1R1-201ENST00000389134 WWC1Q8IX03 1113 aa27.12■■□□□ 1.93
CNEP1R1-201ENST00000389134 ZNF594Q96JF6 807 aaPredicted RBP27.12■■□□□ 1.93
CNEP1R1-201ENST00000389134 SPDYE5A6NIY4 337 aa27.11■■□□□ 1.93
CNEP1R1-201ENST00000389134 CETPP11597 493 aa27.11■■□□□ 1.93
CNEP1R1-201ENST00000389134 CRKP46108 304 aa27.11■■□□□ 1.93
CNEP1R1-201ENST00000389134 PRMT2P55345 433 aa27.11■■□□□ 1.93
CNEP1R1-201ENST00000389134 LACTBP83111 547 aaPredicted RBP27.11■■□□□ 1.93
CNEP1R1-201ENST00000389134 IL16Q14005 1332 aa27.11■■□□□ 1.93
CNEP1R1-201ENST00000389134 RANBP2P49792 3224 aaKnown RBP27.1■■□□□ 1.93
CNEP1R1-201ENST00000389134 MYCP01106 439 aaPredicted RBP27.1■■□□□ 1.93
CNEP1R1-201ENST00000389134 SH3TC2Q8TF17 1288 aa27.1■■□□□ 1.93
CNEP1R1-201ENST00000389134 GYG1P46976 350 aa27.09■■□□□ 1.93
CNEP1R1-201ENST00000389134 BEND3Q5T5X7 828 aa27.09■■□□□ 1.93
CNEP1R1-201ENST00000389134 ERO1BQ86YB8 467 aa27.09■■□□□ 1.93
CNEP1R1-201ENST00000389134 FAM84BQ96KN1 310 aaPredicted RBP27.09■■□□□ 1.93
CNEP1R1-201ENST00000389134 EPHA10Q5JZY3 1008 aa27.08■■□□□ 1.93
CNEP1R1-201ENST00000389134 ARHGAP39Q9C0H5 1083 aa27.08■■□□□ 1.93
CNEP1R1-201ENST00000389134 BTBD19C9JJ37 291 aa27.07■■□□□ 1.92
CNEP1R1-201ENST00000389134 HDLBPQ00341 1268 aaKnown RBP27.07■■□□□ 1.92
CNEP1R1-201ENST00000389134 SNAPC2Q13487 334 aa27.07■■□□□ 1.92
CNEP1R1-201ENST00000389134 AK9Q5TCS8 1911 aa27.07■■□□□ 1.92
CNEP1R1-201ENST00000389134 HOOK2Q96ED9 719 aa27.06■■□□□ 1.92
CNEP1R1-201ENST00000389134 SNCAIPQ9Y6H5 919 aa27.06■■□□□ 1.92
CNEP1R1-201ENST00000389134 F6X3S4 739 aa27.05■■□□□ 1.92
CNEP1R1-201ENST00000389134 GRM8O00222 908 aa27.05■■□□□ 1.92
CNEP1R1-201ENST00000389134 VAMP4O75379 141 aa27.05■■□□□ 1.92
CNEP1R1-201ENST00000389134 IRF6O14896 467 aa27.04■■□□□ 1.92
CNEP1R1-201ENST00000389134 PPIL2Q13356 520 aa27.04■■□□□ 1.92
CNEP1R1-201ENST00000389134 TBC1D22AQ8WUA7 517 aa27.04■■□□□ 1.92
CNEP1R1-201ENST00000389134 WRNIP1Q96S55 665 aa27.04■■□□□ 1.92
CNEP1R1-201ENST00000389134 NCBP3Q53F19 620 aaKnown RBP27.03■■□□□ 1.92
CNEP1R1-201ENST00000389134 CHRDL2Q6WN34 429 aa27.03■■□□□ 1.92
CNEP1R1-201ENST00000389134 FAM83AQ86UY5 434 aa27.03■■□□□ 1.92
CNEP1R1-201ENST00000389134 VPS37DQ86XT2 251 aa27.03■■□□□ 1.92
CNEP1R1-201ENST00000389134 DPF3Q92784 378 aa27.03■■□□□ 1.92
CNEP1R1-201ENST00000389134 C9orf78Q9NZ63 289 aaPredicted RBP27.03■■□□□ 1.92
CNEP1R1-201ENST00000389134 TMOD2Q9NZR1 351 aa27.03■■□□□ 1.92
CNEP1R1-201ENST00000389134 FANCIQ9NVI1 1328 aa27.02■■□□□ 1.92
CNEP1R1-201ENST00000389134 C17orf99Q6UX52 265 aa27.02■■□□□ 1.92
CNEP1R1-201ENST00000389134 NKX2-3Q8TAU0 364 aa27.02■■□□□ 1.92
CNEP1R1-201ENST00000389134 ZKSCAN4Q969J2 545 aaPredicted RBP27.02■■□□□ 1.92
CNEP1R1-201ENST00000389134 TEKT1Q969V4 418 aa27.02■■□□□ 1.92
CNEP1R1-201ENST00000389134 MRIQ9BWK5 157 aa27.02■■□□□ 1.92
CNEP1R1-201ENST00000389134 HOXD10P28358 340 aa27.01■■□□□ 1.91
CNEP1R1-201ENST00000389134 FKBP1CQ5VVH2 108 aa27.01■■□□□ 1.91
CNEP1R1-201ENST00000389134 FBXO33Q7Z6M2 555 aa27.01■■□□□ 1.91
CNEP1R1-201ENST00000389134 MROH5Q6ZUA9 1318 aa27■■□□□ 1.91
CNEP1R1-201ENST00000389134 CACNB3P54284 484 aa27■■□□□ 1.91
CNEP1R1-201ENST00000389134 PPATQ06203 517 aa27■■□□□ 1.91
CNEP1R1-201ENST00000389134 GRIK5Q16478 980 aa27■■□□□ 1.91
CNEP1R1-201ENST00000389134 DCAF15Q66K64 600 aa27■■□□□ 1.91
CNEP1R1-201ENST00000389134 ZDHHC15Q96MV8 337 aa27■■□□□ 1.91
CNEP1R1-201ENST00000389134 SRRDQ9UH36 339 aa27■■□□□ 1.91
CNEP1R1-201ENST00000389134 MGAMO43451 1857 aa27■■□□□ 1.91
CNEP1R1-201ENST00000389134 FRAT2O75474 233 aaPredicted RBP26.99■■□□□ 1.91
CNEP1R1-201ENST00000389134 PSMC4P43686 418 aa26.99■■□□□ 1.91
CNEP1R1-201ENST00000389134 CHAF1AQ13111 956 aaPredicted RBP26.99■■□□□ 1.91
CNEP1R1-201ENST00000389134 MTFR1Q15390 333 aa26.99■■□□□ 1.91
CNEP1R1-201ENST00000389134 SHISA4Q96DD7 197 aa26.99■■□□□ 1.91
CNEP1R1-201ENST00000389134 PUS3Q9BZE2 481 aaKnown RBP26.99■■□□□ 1.91
CNEP1R1-201ENST00000389134 RIPOR2Q9Y4F9 1068 aa26.99■■□□□ 1.91
CNEP1R1-201ENST00000389134 ALDH1L1O75891 902 aa26.98■■□□□ 1.91
CNEP1R1-201ENST00000389134 CAVIN4Q5BKX8 364 aa26.98■■□□□ 1.91
CNEP1R1-201ENST00000389134 RAET1EQ8TD07 263 aa26.98■■□□□ 1.91
CNEP1R1-201ENST00000389134 RBM27Q9P2N5 1060 aaKnown RBP26.98■■□□□ 1.91
CNEP1R1-201ENST00000389134 IQSEC3Q9UPP2 1182 aaPredicted RBP26.98■■□□□ 1.91
CNEP1R1-201ENST00000389134 MYH13Q9UKX3 1938 aa26.97■■□□□ 1.91
CNEP1R1-201ENST00000389134 ANKRD23Q86SG2 305 aa26.97■■□□□ 1.91
CNEP1R1-201ENST00000389134 TRIM47Q96LD4 638 aa26.97■■□□□ 1.91
CNEP1R1-201ENST00000389134 HTATIP2Q9BUP3 242 aa26.97■■□□□ 1.91
CNEP1R1-201ENST00000389134 ZNF341Q9BYN7 854 aa26.97■■□□□ 1.91
CNEP1R1-201ENST00000389134 CPA4Q9UI42 421 aa26.97■■□□□ 1.91
CNEP1R1-201ENST00000389134 RPAP1Q9BWH6 1393 aaPredicted RBP26.97■■□□□ 1.91
CNEP1R1-201ENST00000389134 MAST3O60307 1309 aa26.96■■□□□ 1.91
CNEP1R1-201ENST00000389134 GRK4P32298 578 aa26.96■■□□□ 1.91
CNEP1R1-201ENST00000389134 SUGT1Q9Y2Z0 365 aa26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms