RNA–Protein interactions for RNA: ENST00000383721.8

NEK4-202, Transcript of NIMA related kinase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK4, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-202ENST00000383721 GUCY1B3Q02153 619 aa16.22■□□□□ 0.19
NEK4-202ENST00000383721 FKBP4Q02790 459 aaKnown RBP eCLIP16.22■□□□□ 0.19
NEK4-202ENST00000383721 DZIP3Q86Y13 1208 aaKnown RBP16.22■□□□□ 0.19
NEK4-202ENST00000383721 ISCA1Q9BUE6 129 aa16.22■□□□□ 0.19
NEK4-202ENST00000383721 SRP68Q9UHB9 627 aaKnown RBP16.22■□□□□ 0.19
NEK4-202ENST00000383721 LRMPQ12912 555 aa16.22■□□□□ 0.19
NEK4-202ENST00000383721 SNW1Q13573 536 aaKnown RBP16.22■□□□□ 0.19
NEK4-202ENST00000383721 IQCB1Q15051 598 aa16.22■□□□□ 0.19
NEK4-202ENST00000383721 GPHNQ9NQX3 736 aaPredicted RBP16.22■□□□□ 0.19
NEK4-202ENST00000383721 CAVIN2O95810 425 aa16.21■□□□□ 0.19
NEK4-202ENST00000383721 FDPSP14324 419 aaKnown RBP16.21■□□□□ 0.19
NEK4-202ENST00000383721 SLC15A2Q16348 729 aa16.21■□□□□ 0.19
NEK4-202ENST00000383721 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.21■□□□□ 0.19
NEK4-202ENST00000383721 DRC7Q8IY82 874 aa16.21■□□□□ 0.19
NEK4-202ENST00000383721 FBXL16Q8N461 479 aa16.21■□□□□ 0.19
NEK4-202ENST00000383721 PDGFDQ9GZP0 370 aaPredicted RBP16.21■□□□□ 0.19
NEK4-202ENST00000383721 EVCP57679 992 aa16.21■□□□□ 0.18
NEK4-202ENST00000383721 HLFQ16534 295 aa16.21■□□□□ 0.18
NEK4-202ENST00000383721 ATL3Q6DD88 541 aa16.21■□□□□ 0.18
NEK4-202ENST00000383721 C11orf57Q6ZUT1 292 aaPredicted RBP16.21■□□□□ 0.18
NEK4-202ENST00000383721 ZNF710Q8N1W2 664 aa16.21■□□□□ 0.18
NEK4-202ENST00000383721 ENGASEQ8NFI3 743 aa16.21■□□□□ 0.18
NEK4-202ENST00000383721 CARMIL3Q8ND23 1372 aa16.2■□□□□ 0.18
NEK4-202ENST00000383721 CCDC57Q2TAC2 916 aa16.2■□□□□ 0.18
NEK4-202ENST00000383721 TRAPPC3LQ5T215 181 aa16.2■□□□□ 0.18
NEK4-202ENST00000383721 XAGE2Q96GT9 111 aa16.2■□□□□ 0.18
NEK4-202ENST00000383721 ZNF396Q96N95 335 aaPredicted RBP16.2■□□□□ 0.18
NEK4-202ENST00000383721 CTAGE5O15320 804 aa16.2■□□□□ 0.18
NEK4-202ENST00000383721 TCIRG1Q13488 830 aa16.2■□□□□ 0.18
NEK4-202ENST00000383721 SCARF1Q14162 830 aa16.2■□□□□ 0.18
NEK4-202ENST00000383721 CCDC158Q5M9N0 1113 aa16.2■□□□□ 0.18
NEK4-202ENST00000383721 ZSCAN25Q6NSZ9 544 aa16.2■□□□□ 0.18
NEK4-202ENST00000383721 COL23A1Q86Y22 540 aaPredicted RBP16.2■□□□□ 0.18
NEK4-202ENST00000383721 STK32BQ9NY57 414 aa16.2■□□□□ 0.18
NEK4-202ENST00000383721 PNPLA7Q6ZV29 1317 aa16.19■□□□□ 0.18
NEK4-202ENST00000383721 HAND2P61296 217 aa16.19■□□□□ 0.18
NEK4-202ENST00000383721 TTC39AQ5SRH9 613 aa16.19■□□□□ 0.18
NEK4-202ENST00000383721 CAMTA2O94983 1202 aa16.19■□□□□ 0.18
NEK4-202ENST00000383721 GORABQ5T7V8 394 aa16.19■□□□□ 0.18
NEK4-202ENST00000383721 KIF6Q6ZMV9 814 aa16.19■□□□□ 0.18
NEK4-202ENST00000383721 CCDC73Q6ZRK6 1079 aa16.19■□□□□ 0.18
NEK4-202ENST00000383721 CCDC85AQ96PX6 553 aaPredicted RBP16.19■□□□□ 0.18
NEK4-202ENST00000383721 SPEF2Q9C093 1822 aa16.19■□□□□ 0.18
NEK4-202ENST00000383721 C4AP0C0L4 1744 aa16.18■□□□□ 0.18
NEK4-202ENST00000383721 FAM177BA6PVY3 158 aa16.18■□□□□ 0.18
NEK4-202ENST00000383721 FAM160A1Q05DH4 1040 aa16.18■□□□□ 0.18
NEK4-202ENST00000383721 STX1AQ16623 288 aa16.18■□□□□ 0.18
NEK4-202ENST00000383721 WASHC4Q2M389 1173 aa16.18■□□□□ 0.18
NEK4-202ENST00000383721 CLIP2Q9UDT6 1046 aa16.18■□□□□ 0.18
NEK4-202ENST00000383721 CTNNA3Q9UI47 895 aa16.18■□□□□ 0.18
NEK4-202ENST00000383721 MAP3K15Q6ZN16 1313 aa16.18■□□□□ 0.18
NEK4-202ENST00000383721 FGAP02671 866 aa16.18■□□□□ 0.18
NEK4-202ENST00000383721 RFC4P35249 363 aa16.18■□□□□ 0.18
NEK4-202ENST00000383721 ME1P48163 572 aa16.18■□□□□ 0.18
NEK4-202ENST00000383721 CCDC144BQ3MJ40 725 aa16.18■□□□□ 0.18
NEK4-202ENST00000383721 CCDC144CPQ8IYA2 1237 aa16.18■□□□□ 0.18
NEK4-202ENST00000383721 AKAP2Q9Y2D5 859 aa16.18■□□□□ 0.18
NEK4-202ENST00000383721 A0A087WWV3 80 aa16.17■□□□□ 0.18
NEK4-202ENST00000383721 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.17■□□□□ 0.18
NEK4-202ENST00000383721 KINO60870 393 aaKnown RBP16.17■□□□□ 0.18
NEK4-202ENST00000383721 ZFYP08048 801 aaPredicted RBP16.17■□□□□ 0.18
NEK4-202ENST00000383721 CDC25BP30305 580 aa16.17■□□□□ 0.18
NEK4-202ENST00000383721 ZAP70P43403 619 aa16.17■□□□□ 0.18
NEK4-202ENST00000383721 IMMTQ16891 758 aaKnown RBP16.17■□□□□ 0.18
NEK4-202ENST00000383721 OTUD7BQ6GQQ9 843 aa16.17■□□□□ 0.18
NEK4-202ENST00000383721 SARM1Q6SZW1 724 aa16.17■□□□□ 0.18
NEK4-202ENST00000383721 FSIP1Q8NA03 581 aa16.17■□□□□ 0.18
NEK4-202ENST00000383721 CACTINQ8WUQ7 758 aaKnown RBP16.17■□□□□ 0.18
NEK4-202ENST00000383721 FAM89AQ96GI7 184 aa16.17■□□□□ 0.18
NEK4-202ENST00000383721 BCL2L12Q9HB09 334 aa16.17■□□□□ 0.18
NEK4-202ENST00000383721 FBXO3Q9UK99 471 aa16.17■□□□□ 0.18
NEK4-202ENST00000383721 SRCAPQ6ZRS2 3230 aa16.17■□□□□ 0.18
NEK4-202ENST00000383721 GOLGA6L19H0YKK7 550 aa16.17■□□□□ 0.18
NEK4-202ENST00000383721 RIOK3O14730 519 aaKnown RBP16.17■□□□□ 0.18
NEK4-202ENST00000383721 TRIM28Q13263 835 aaKnown RBP16.17■□□□□ 0.18
NEK4-202ENST00000383721 LRRFIP1Q32MZ4 808 aaKnown RBP16.17■□□□□ 0.18
NEK4-202ENST00000383721 HSP90AB3PQ58FF7 597 aa16.17■□□□□ 0.18
NEK4-202ENST00000383721 PI16Q6UXB8 463 aa16.17■□□□□ 0.18
NEK4-202ENST00000383721 MB21D2Q8IYB1 491 aaPredicted RBP16.17■□□□□ 0.18
NEK4-202ENST00000383721 CHMP4CQ96CF2 233 aa16.17■□□□□ 0.18
NEK4-202ENST00000383721 PUS7LQ9H0K6 701 aaKnown RBP16.17■□□□□ 0.18
NEK4-202ENST00000383721 NARFQ9UHQ1 456 aa16.17■□□□□ 0.18
NEK4-202ENST00000383721 PCDHA7Q9UN72 937 aa16.17■□□□□ 0.18
NEK4-202ENST00000383721 RTEL1Q9NZ71 1219 aa16.16■□□□□ 0.18
NEK4-202ENST00000383721 HPS5Q9UPZ3 1129 aa16.16■□□□□ 0.18
NEK4-202ENST00000383721 PRC1O43663 620 aa16.16■□□□□ 0.18
NEK4-202ENST00000383721 CSF1RP07333 972 aa16.16■□□□□ 0.18
NEK4-202ENST00000383721 CHAF1AQ13111 956 aaPredicted RBP16.16■□□□□ 0.18
NEK4-202ENST00000383721 APPBP2Q92624 585 aa16.16■□□□□ 0.18
NEK4-202ENST00000383721 ARID3AQ99856 593 aa16.16■□□□□ 0.18
NEK4-202ENST00000383721 ZPR1O75312 459 aa16.15■□□□□ 0.18
NEK4-202ENST00000383721 PCCAP05165 728 aaPredicted RBP16.15■□□□□ 0.18
NEK4-202ENST00000383721 ADRA2BP18089 450 aa16.15■□□□□ 0.18
NEK4-202ENST00000383721 GPTP24298 496 aa16.15■□□□□ 0.18
NEK4-202ENST00000383721 ANTXR2P58335 489 aa16.15■□□□□ 0.18
NEK4-202ENST00000383721 R3HDM1Q15032 1099 aaKnown RBP16.15■□□□□ 0.18
NEK4-202ENST00000383721 DHX40Q8IX18 779 aaKnown RBP16.15■□□□□ 0.18
NEK4-202ENST00000383721 FMR1NBQ8N0W7 255 aaPredicted RBP16.15■□□□□ 0.18
NEK4-202ENST00000383721 MYH15Q9Y2K3 1946 aa16.15■□□□□ 0.18
NEK4-202ENST00000383721 KLF18A0A0U1RQI7 1052 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms