RNA–Protein interactions for RNA: ENST00000382227.7

TMEM41A-202, Transcript of transmembrane protein 41A, humanhuman

TSL 4

Gene TMEM41A, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-202ENST00000382227 ANKRD13AQ8IZ07 590 aa23.54■■□□□ 1.36
TMEM41A-202ENST00000382227 KLHDC4Q8TBB5 520 aa23.54■■□□□ 1.36
TMEM41A-202ENST00000382227 FRAT2O75474 233 aaPredicted RBP23.53■■□□□ 1.36
TMEM41A-202ENST00000382227 CHAF1AQ13111 956 aaPredicted RBP23.53■■□□□ 1.36
TMEM41A-202ENST00000382227 GRIK5Q16478 980 aa23.53■■□□□ 1.36
TMEM41A-202ENST00000382227 TBC1D22AQ8WUA7 517 aa23.53■■□□□ 1.36
TMEM41A-202ENST00000382227 IGF2BP3O00425 579 aaKnown RBP eCLIP23.52■■□□□ 1.36
TMEM41A-202ENST00000382227 HDLBPQ00341 1268 aaKnown RBP23.52■■□□□ 1.36
TMEM41A-202ENST00000382227 ALDH1L2Q3SY69 923 aa23.52■■□□□ 1.36
TMEM41A-202ENST00000382227 FBXO46Q6PJ61 603 aaPredicted RBP23.52■■□□□ 1.36
TMEM41A-202ENST00000382227 TEPSINQ96N21 525 aa23.52■■□□□ 1.36
TMEM41A-202ENST00000382227 TCP10L2B9ZVM9 353 aa23.51■■□□□ 1.35
TMEM41A-202ENST00000382227 GJA5P36382 358 aa23.51■■□□□ 1.35
TMEM41A-202ENST00000382227 BCAMP50895 628 aa23.51■■□□□ 1.35
TMEM41A-202ENST00000382227 LAMB1P07942 1786 aa23.5■■□□□ 1.35
TMEM41A-202ENST00000382227 TNNI2P48788 182 aa23.5■■□□□ 1.35
TMEM41A-202ENST00000382227 PUM3Q15397 648 aaKnown RBP23.5■■□□□ 1.35
TMEM41A-202ENST00000382227 CDAN1Q8IWY9 1227 aa23.5■■□□□ 1.35
TMEM41A-202ENST00000382227 TMEM39BQ9GZU3 492 aa23.5■■□□□ 1.35
TMEM41A-202ENST00000382227 KIF16BQ96L93 1317 aa23.5■■□□□ 1.35
TMEM41A-202ENST00000382227 IFIT1P09914 478 aaKnown RBP23.49■■□□□ 1.35
TMEM41A-202ENST00000382227 FGFR2P21802 821 aa23.49■■□□□ 1.35
TMEM41A-202ENST00000382227 OTUD7BQ6GQQ9 843 aa23.49■■□□□ 1.35
TMEM41A-202ENST00000382227 TEKT1Q969V4 418 aa23.49■■□□□ 1.35
TMEM41A-202ENST00000382227 CDCA7LQ96GN5 454 aa23.49■■□□□ 1.35
TMEM41A-202ENST00000382227 SMC4Q9NTJ3 1288 aa23.49■■□□□ 1.35
TMEM41A-202ENST00000382227 RFX5P48382 616 aaPredicted RBP23.48■■□□□ 1.35
TMEM41A-202ENST00000382227 OPTNQ96CV9 577 aa23.48■■□□□ 1.35
TMEM41A-202ENST00000382227 MRIQ9BWK5 157 aa23.48■■□□□ 1.35
TMEM41A-202ENST00000382227 ELP3Q9H9T3 547 aa23.48■■□□□ 1.35
TMEM41A-202ENST00000382227 TESPA1A2RU30 521 aaPredicted RBP23.47■■□□□ 1.35
TMEM41A-202ENST00000382227 EYA2O00167 538 aa23.47■■□□□ 1.35
TMEM41A-202ENST00000382227 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.47■■□□□ 1.35
TMEM41A-202ENST00000382227 ZDHHC15Q96MV8 337 aa23.47■■□□□ 1.35
TMEM41A-202ENST00000382227 SUGT1Q9Y2Z0 365 aa23.47■■□□□ 1.35
TMEM41A-202ENST00000382227 CRHR2Q13324 411 aa23.46■■□□□ 1.35
TMEM41A-202ENST00000382227 PTPN18Q99952 460 aa23.46■■□□□ 1.35
TMEM41A-202ENST00000382227 OTOFQ9HC10 1997 aa23.46■■□□□ 1.35
TMEM41A-202ENST00000382227 MAST3O60307 1309 aa23.45■■□□□ 1.34
TMEM41A-202ENST00000382227 CACNB3P54284 484 aa23.45■■□□□ 1.34
TMEM41A-202ENST00000382227 MAP3K9P80192 1104 aa23.45■■□□□ 1.34
TMEM41A-202ENST00000382227 TRMT2AQ8IZ69 625 aaKnown RBP23.45■■□□□ 1.34
TMEM41A-202ENST00000382227 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.45■■□□□ 1.34
TMEM41A-202ENST00000382227 LPIN2Q92539 896 aa23.45■■□□□ 1.34
TMEM41A-202ENST00000382227 SLC5A1P13866 664 aa23.44■■□□□ 1.34
TMEM41A-202ENST00000382227 VGLL4Q14135 290 aa23.44■■□□□ 1.34
TMEM41A-202ENST00000382227 MS4A4AQ96JQ5 239 aa23.44■■□□□ 1.34
TMEM41A-202ENST00000382227 TMOD2Q9NZR1 351 aa23.44■■□□□ 1.34
TMEM41A-202ENST00000382227 TRIM17Q9Y577 477 aa23.44■■□□□ 1.34
TMEM41A-202ENST00000382227 CT47B1P0C2W7 299 aaPredicted RBP23.43■■□□□ 1.34
TMEM41A-202ENST00000382227 UBTFL1P0CB47 393 aaPredicted RBP23.43■■□□□ 1.34
TMEM41A-202ENST00000382227 APOBEC3HQ6NTF7 200 aaKnown RBP23.43■■□□□ 1.34
TMEM41A-202ENST00000382227 OTOP1Q7RTM1 612 aa23.43■■□□□ 1.34
TMEM41A-202ENST00000382227 ATG9AQ7Z3C6 839 aa23.43■■□□□ 1.34
TMEM41A-202ENST00000382227 CNKSR2Q8WXI2 1034 aa23.43■■□□□ 1.34
TMEM41A-202ENST00000382227 CSADQ9Y600 493 aa23.43■■□□□ 1.34
TMEM41A-202ENST00000382227 SLC34A2O95436 690 aa23.42■■□□□ 1.34
TMEM41A-202ENST00000382227 FKBP1CQ5VVH2 108 aa23.42■■□□□ 1.34
TMEM41A-202ENST00000382227 HHIPL2Q6UWX4 724 aa23.42■■□□□ 1.34
TMEM41A-202ENST00000382227 FAM83AQ86UY5 434 aa23.42■■□□□ 1.34
TMEM41A-202ENST00000382227 WDR66Q8TBY9 1149 aa23.42■■□□□ 1.34
TMEM41A-202ENST00000382227 ERO1AQ96HE7 468 aa23.42■■□□□ 1.34
TMEM41A-202ENST00000382227 FBXO3Q9UK99 471 aa23.42■■□□□ 1.34
TMEM41A-202ENST00000382227 TNRC18O15417 2968 aaPredicted RBP23.41■■□□□ 1.34
TMEM41A-202ENST00000382227 GTF2A2P52657 109 aa23.41■■□□□ 1.34
TMEM41A-202ENST00000382227 NOB1Q9ULX3 412 aaKnown RBP23.41■■□□□ 1.34
TMEM41A-202ENST00000382227 CIAO1O76071 339 aa23.4■■□□□ 1.34
TMEM41A-202ENST00000382227 BRI3BPQ8WY22 251 aa23.4■■□□□ 1.34
TMEM41A-202ENST00000382227 HOOK2Q96ED9 719 aa23.4■■□□□ 1.34
TMEM41A-202ENST00000382227 OTUD5Q96G74 571 aa23.4■■□□□ 1.34
TMEM41A-202ENST00000382227 PDE4DIPQ5VU43 2346 aa23.4■■□□□ 1.34
TMEM41A-202ENST00000382227 CCL15-CCL14A0A0B4J2E2 113 aa23.39■■□□□ 1.33
TMEM41A-202ENST00000382227 SP3Q02447 781 aa23.39■■□□□ 1.33
TMEM41A-202ENST00000382227 CCL15Q16663 113 aa23.39■■□□□ 1.33
TMEM41A-202ENST00000382227 CD99L2Q8TCZ2 262 aa23.39■■□□□ 1.33
TMEM41A-202ENST00000382227 API5Q9BZZ5 524 aaKnown RBP23.39■■□□□ 1.33
TMEM41A-202ENST00000382227 SIL1Q9H173 461 aa23.39■■□□□ 1.33
TMEM41A-202ENST00000382227 SPDYE5A6NIY4 337 aa23.38■■□□□ 1.33
TMEM41A-202ENST00000382227 ATP2B3Q16720 1220 aa23.38■■□□□ 1.33
TMEM41A-202ENST00000382227 WRNIP1Q96S55 665 aa23.38■■□□□ 1.33
TMEM41A-202ENST00000382227 CEP126Q9P2H0 1117 aa23.38■■□□□ 1.33
TMEM41A-202ENST00000382227 HDAC5Q9UQL6 1122 aa23.38■■□□□ 1.33
TMEM41A-202ENST00000382227 RPAP1Q9BWH6 1393 aaPredicted RBP23.38■■□□□ 1.33
TMEM41A-202ENST00000382227 PTPN22Q9Y2R2 807 aa23.37■■□□□ 1.33
TMEM41A-202ENST00000382227 LRRFIP2Q9Y608 721 aaKnown RBP23.37■■□□□ 1.33
TMEM41A-202ENST00000382227 SNCAIPQ9Y6H5 919 aa23.37■■□□□ 1.33
TMEM41A-202ENST00000382227 TAF1CQ15572 869 aaPredicted RBP23.36■■□□□ 1.33
TMEM41A-202ENST00000382227 DCAF15Q66K64 600 aa23.36■■□□□ 1.33
TMEM41A-202ENST00000382227 ERO1BQ86YB8 467 aa23.36■■□□□ 1.33
TMEM41A-202ENST00000382227 EFCC1Q9HA90 598 aa23.36■■□□□ 1.33
TMEM41A-202ENST00000382227 ZFYVE28Q9HCC9 887 aa23.36■■□□□ 1.33
TMEM41A-202ENST00000382227 GNL3LQ9NVN8 582 aaKnown RBP23.36■■□□□ 1.33
TMEM41A-202ENST00000382227 DAGLAQ9Y4D2 1042 aa23.36■■□□□ 1.33
TMEM41A-202ENST00000382227 IL15P40933 162 aaPredicted RBP23.35■■□□□ 1.33
TMEM41A-202ENST00000382227 INTS3Q68E01 1043 aaKnown RBP23.35■■□□□ 1.33
TMEM41A-202ENST00000382227 FAM43AQ8N2R8 423 aa23.35■■□□□ 1.33
TMEM41A-202ENST00000382227 ZKSCAN4Q969J2 545 aaPredicted RBP23.35■■□□□ 1.33
TMEM41A-202ENST00000382227 MYH13Q9UKX3 1938 aa23.34■■□□□ 1.33
TMEM41A-202ENST00000382227 CETPP11597 493 aa23.34■■□□□ 1.33
TMEM41A-202ENST00000382227 PRDX5P30044 214 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 252 ms