RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 FMR1Q06787 632 aaKnown RBP eCLIP23.76■■□□□ 1.39
GTF3A-201ENST00000381140 AAMPQ13685 434 aa23.76■■□□□ 1.39
GTF3A-201ENST00000381140 USP48Q86UV5 1035 aa23.76■■□□□ 1.39
GTF3A-201ENST00000381140 SPATA5Q8NB90 893 aa23.76■■□□□ 1.39
GTF3A-201ENST00000381140 SCAF8Q9UPN6 1271 aaKnown RBP23.76■■□□□ 1.39
GTF3A-201ENST00000381140 LDHBP07195 334 aaKnown RBP23.75■■□□□ 1.39
GTF3A-201ENST00000381140 PRDX5P30044 214 aa23.75■■□□□ 1.39
GTF3A-201ENST00000381140 CRKP46108 304 aa23.75■■□□□ 1.39
GTF3A-201ENST00000381140 KRT26Q7Z3Y9 468 aa23.75■■□□□ 1.39
GTF3A-201ENST00000381140 ADM5C9JUS6 153 aa23.74■■□□□ 1.39
GTF3A-201ENST00000381140 DLK2Q6UY11 383 aa23.74■■□□□ 1.39
GTF3A-201ENST00000381140 CDC37L1Q7L3B6 337 aa23.74■■□□□ 1.39
GTF3A-201ENST00000381140 MAST3O60307 1309 aa23.73■■□□□ 1.39
GTF3A-201ENST00000381140 TBC1D9Q6ZT07 1266 aa23.73■■□□□ 1.39
GTF3A-201ENST00000381140 SULF1Q8IWU6 871 aa23.73■■□□□ 1.39
GTF3A-201ENST00000381140 ZGPATQ8N5A5 531 aaKnown RBP23.73■■□□□ 1.39
GTF3A-201ENST00000381140 TEKT1Q969V4 418 aa23.73■■□□□ 1.39
GTF3A-201ENST00000381140 PRMT6Q96LA8 375 aaPredicted RBP23.73■■□□□ 1.39
GTF3A-201ENST00000381140 SERPINA10Q9UK55 444 aa23.73■■□□□ 1.39
GTF3A-201ENST00000381140 SUGT1Q9Y2Z0 365 aa23.73■■□□□ 1.39
GTF3A-201ENST00000381140 PDS5AQ29RF7 1337 aaKnown RBP23.73■■□□□ 1.39
GTF3A-201ENST00000381140 PASKQ96RG2 1323 aa23.73■■□□□ 1.39
GTF3A-201ENST00000381140 SALL1Q9NSC2 1324 aa23.73■■□□□ 1.39
GTF3A-201ENST00000381140 CLRN2A0PK11 232 aa23.72■■□□□ 1.39
GTF3A-201ENST00000381140 SPDYE2BA6NHP3 402 aa23.72■■□□□ 1.39
GTF3A-201ENST00000381140 SPDYE6P0CI01 402 aa23.72■■□□□ 1.39
GTF3A-201ENST00000381140 APLP1P51693 650 aa23.72■■□□□ 1.39
GTF3A-201ENST00000381140 ZBED3Q96IU2 234 aaPredicted RBP23.72■■□□□ 1.39
GTF3A-201ENST00000381140 ZNF408Q9H9D4 720 aa23.72■■□□□ 1.39
GTF3A-201ENST00000381140 AOX1Q06278 1338 aa23.72■■□□□ 1.39
GTF3A-201ENST00000381140 MYO1BO43795 1136 aa23.71■■□□□ 1.39
GTF3A-201ENST00000381140 HTRA3P83110 453 aa23.71■■□□□ 1.39
GTF3A-201ENST00000381140 DIXDC1Q155Q3 683 aa23.71■■□□□ 1.39
GTF3A-201ENST00000381140 DZIP1Q86YF9 867 aaKnown RBP23.71■■□□□ 1.39
GTF3A-201ENST00000381140 MTMR14Q8NCE2 650 aa23.71■■□□□ 1.39
GTF3A-201ENST00000381140 ZBTB22O15209 634 aa23.7■■□□□ 1.38
GTF3A-201ENST00000381140 ZAP70P43403 619 aa23.7■■□□□ 1.38
GTF3A-201ENST00000381140 HDAC1Q13547 482 aaPredicted RBP23.7■■□□□ 1.38
GTF3A-201ENST00000381140 SPTY2D1Q68D10 685 aaPredicted RBP23.7■■□□□ 1.38
GTF3A-201ENST00000381140 ERICH6Q7L0X2 663 aa23.7■■□□□ 1.38
GTF3A-201ENST00000381140 VEZTQ9HBM0 779 aa23.7■■□□□ 1.38
GTF3A-201ENST00000381140 HDLBPQ00341 1268 aaKnown RBP23.69■■□□□ 1.38
GTF3A-201ENST00000381140 ZNF512BQ96KM6 892 aaPredicted RBP23.69■■□□□ 1.38
GTF3A-201ENST00000381140 TDRD3Q9H7E2 651 aaKnown RBP23.69■■□□□ 1.38
GTF3A-201ENST00000381140 RAI14Q9P0K7 980 aa23.69■■□□□ 1.38
GTF3A-201ENST00000381140 NDUFB9Q9Y6M9 179 aa23.69■■□□□ 1.38
GTF3A-201ENST00000381140 PITPNM2Q9BZ72 1349 aa23.69■■□□□ 1.38
GTF3A-201ENST00000381140 RWDD1Q9H446 243 aaPredicted RBP23.68■■□□□ 1.38
GTF3A-201ENST00000381140 LRP2BPQ9P2M1 347 aa23.68■■□□□ 1.38
GTF3A-201ENST00000381140 ZBTB47Q9UFB7 747 aaPredicted RBP23.68■■□□□ 1.38
GTF3A-201ENST00000381140 APOBEC3FQ8IUX4 373 aaKnown RBP23.67■■□□□ 1.38
GTF3A-201ENST00000381140 MAST2Q6P0Q8 1798 aa23.67■■□□□ 1.38
GTF3A-201ENST00000381140 CELF2O95319 508 aaKnown RBP23.66■■□□□ 1.38
GTF3A-201ENST00000381140 PRAMEF18Q5VWM3 479 aa23.66■■□□□ 1.38
GTF3A-201ENST00000381140 HHIPL2Q6UWX4 724 aa23.66■■□□□ 1.38
GTF3A-201ENST00000381140 ZNF70Q9UC06 446 aaPredicted RBP23.66■■□□□ 1.38
GTF3A-201ENST00000381140 AK9Q5TCS8 1911 aa23.66■■□□□ 1.38
GTF3A-201ENST00000381140 TMEM88BA6NKF7 163 aa23.65■■□□□ 1.38
GTF3A-201ENST00000381140 CYP2E1P05181 493 aaPredicted RBP23.65■■□□□ 1.38
GTF3A-201ENST00000381140 MECOMQ03112 1051 aa23.65■■□□□ 1.38
GTF3A-201ENST00000381140 ANKRD45Q5TZF3 282 aa23.65■■□□□ 1.38
GTF3A-201ENST00000381140 GCC1Q96CN9 775 aa23.65■■□□□ 1.38
GTF3A-201ENST00000381140 CDCA5Q96FF9 252 aa23.65■■□□□ 1.38
GTF3A-201ENST00000381140 ZDHHC15Q96MV8 337 aa23.65■■□□□ 1.38
GTF3A-201ENST00000381140 DNAJC2Q99543 621 aaKnown RBP23.65■■□□□ 1.38
GTF3A-201ENST00000381140 DAGLAQ9Y4D2 1042 aa23.65■■□□□ 1.38
GTF3A-201ENST00000381140 IGHDP01880 384 aa23.65■■□□□ 1.38
GTF3A-201ENST00000381140 SPDYE2Q495Y8 402 aa23.65■■□□□ 1.38
GTF3A-201ENST00000381140 DOCK2Q92608 1830 aa23.65■■□□□ 1.38
GTF3A-201ENST00000381140 PIH1D3Q9NQM4 214 aaKnown RBP23.65■■□□□ 1.38
GTF3A-201ENST00000381140 CACNB3P54284 484 aa23.64■■□□□ 1.37
GTF3A-201ENST00000381140 MRIQ9BWK5 157 aa23.64■■□□□ 1.37
GTF3A-201ENST00000381140 PPP4R2Q9NY27 417 aa23.64■■□□□ 1.37
GTF3A-201ENST00000381140 TCP10L2B9ZVM9 353 aa23.63■■□□□ 1.37
GTF3A-201ENST00000381140 CST9Q5W186 159 aa23.63■■□□□ 1.37
GTF3A-201ENST00000381140 B4GALNT3Q6L9W6 998 aa23.63■■□□□ 1.37
GTF3A-201ENST00000381140 APOBEC3HQ6NTF7 200 aaKnown RBP23.63■■□□□ 1.37
GTF3A-201ENST00000381140 SLF2Q8IX21 1173 aa23.63■■□□□ 1.37
GTF3A-201ENST00000381140 BOLA2Q9H3K6 86 aa23.63■■□□□ 1.37
GTF3A-201ENST00000381140 ANTXR1Q9H6X2 564 aa23.63■■□□□ 1.37
GTF3A-201ENST00000381140 CREBZFQ9NS37 354 aa23.63■■□□□ 1.37
GTF3A-201ENST00000381140 TMOD2Q9NZR1 351 aa23.63■■□□□ 1.37
GTF3A-201ENST00000381140 ABT1Q9ULW3 272 aaKnown RBP23.63■■□□□ 1.37
GTF3A-201ENST00000381140 IDH1O75874 414 aaKnown RBP23.62■■□□□ 1.37
GTF3A-201ENST00000381140 TSHZ3Q63HK5 1081 aa23.62■■□□□ 1.37
GTF3A-201ENST00000381140 GPATCH3Q96I76 525 aa23.62■■□□□ 1.37
GTF3A-201ENST00000381140 MYH7P12883 1935 aa23.61■■□□□ 1.37
GTF3A-201ENST00000381140 GSTO1P78417 241 aa23.61■■□□□ 1.37
GTF3A-201ENST00000381140 NSUN4Q96CB9 384 aaKnown RBP23.61■■□□□ 1.37
GTF3A-201ENST00000381140 DEFB129Q9H1M3 183 aa23.61■■□□□ 1.37
GTF3A-201ENST00000381140 ECHDC1Q9NTX5 307 aa23.61■■□□□ 1.37
GTF3A-201ENST00000381140 MROH7-TTC4A0A0A0MT08 1334 aa23.6■■□□□ 1.37
GTF3A-201ENST00000381140 GOLIM4O00461 696 aa23.6■■□□□ 1.37
GTF3A-201ENST00000381140 ATP5JP18859 108 aa23.6■■□□□ 1.37
GTF3A-201ENST00000381140 NAA16Q6N069 864 aaPredicted RBP23.6■■□□□ 1.37
GTF3A-201ENST00000381140 CDC42EP5Q6NZY7 148 aa23.6■■□□□ 1.37
GTF3A-201ENST00000381140 OTUD7AQ8TE49 926 aaPredicted RBP23.6■■□□□ 1.37
GTF3A-201ENST00000381140 ZNF384Q8TF68 577 aa23.6■■□□□ 1.37
GTF3A-201ENST00000381140 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.6■■□□□ 1.37
GTF3A-201ENST00000381140 USP40Q9NVE5 1235 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms