RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 DNAJC25Q9H1X3 360 aa7.53□□□□□ -1.2
RIPK1-202ENST00000380409 DDX19AQ9NUU7 478 aaKnown RBP7.53□□□□□ -1.2
RIPK1-202ENST00000380409 EMILIN1Q9Y6C2 1016 aa7.53□□□□□ -1.2
RIPK1-202ENST00000380409 TMEM2Q9UHN6 1383 aa7.53□□□□□ -1.2
RIPK1-202ENST00000380409 MYO1FO00160 1098 aa7.53□□□□□ -1.2
RIPK1-202ENST00000380409 NF2P35240 595 aa7.53□□□□□ -1.2
RIPK1-202ENST00000380409 MCM10Q7L590 875 aa7.53□□□□□ -1.2
RIPK1-202ENST00000380409 MPHOSPH8Q99549 860 aa7.53□□□□□ -1.2
RIPK1-202ENST00000380409 ANAPC4Q9UJX5 808 aa7.53□□□□□ -1.2
RIPK1-202ENST00000380409 RIMS2Q9UQ26 1411 aa7.53□□□□□ -1.2
RIPK1-202ENST00000380409 XRN1Q8IZH2 1706 aaKnown RBP7.53□□□□□ -1.2
RIPK1-202ENST00000380409 PDLIM1O00151 329 aa7.52□□□□□ -1.2
RIPK1-202ENST00000380409 FESP07332 822 aa7.52□□□□□ -1.2
RIPK1-202ENST00000380409 SMTNP53814 917 aa7.52□□□□□ -1.2
RIPK1-202ENST00000380409 MKRN4PQ13434 485 aaPredicted RBP7.52□□□□□ -1.2
RIPK1-202ENST00000380409 FBXO41Q8TF61 875 aa7.52□□□□□ -1.2
RIPK1-202ENST00000380409 TCP11Q8WWU5 503 aa7.52□□□□□ -1.2
RIPK1-202ENST00000380409 KIF9Q9HAQ2 790 aa7.52□□□□□ -1.2
RIPK1-202ENST00000380409 PPP2R3AQ06190 1150 aa7.52□□□□□ -1.21
RIPK1-202ENST00000380409 C16orf71Q8IYS4 520 aaPredicted RBP7.52□□□□□ -1.21
RIPK1-202ENST00000380409 CABLES1Q8TDN4 633 aa7.52□□□□□ -1.21
RIPK1-202ENST00000380409 PLEKHG4BQ96PX9 1271 aa7.52□□□□□ -1.21
RIPK1-202ENST00000380409 ESYT1Q9BSJ8 1104 aa7.52□□□□□ -1.21
RIPK1-202ENST00000380409 RIPOR2Q9Y4F9 1068 aa7.52□□□□□ -1.21
RIPK1-202ENST00000380409 ATP6V1DQ9Y5K8 247 aa7.52□□□□□ -1.21
RIPK1-202ENST00000380409 DEPDC5O75140 1603 aa7.52□□□□□ -1.21
RIPK1-202ENST00000380409 RPGRIP1LQ68CZ1 1315 aa7.52□□□□□ -1.21
RIPK1-202ENST00000380409 VPS37CA5D8V6 355 aaPredicted RBP7.52□□□□□ -1.21
RIPK1-202ENST00000380409 FAM83GA6ND36 823 aa7.52□□□□□ -1.21
RIPK1-202ENST00000380409 LRRIQ3A6PVS8 624 aaPredicted RBP7.52□□□□□ -1.21
RIPK1-202ENST00000380409 SURF6O75683 361 aaKnown RBP7.52□□□□□ -1.21
RIPK1-202ENST00000380409 VCPKMTQ9H867 229 aa7.52□□□□□ -1.21
RIPK1-202ENST00000380409 IL1RAPL2Q9NP60 686 aa7.52□□□□□ -1.21
RIPK1-202ENST00000380409 STK24Q9Y6E0 443 aa7.52□□□□□ -1.21
RIPK1-202ENST00000380409 U3KPZ7 1027 aaPredicted RBP7.52□□□□□ -1.21
RIPK1-202ENST00000380409 PYGLP06737 847 aa7.52□□□□□ -1.21
RIPK1-202ENST00000380409 NME9Q86XW9 330 aa7.52□□□□□ -1.21
RIPK1-202ENST00000380409 DDX54Q8TDD1 881 aaKnown RBP7.52□□□□□ -1.21
RIPK1-202ENST00000380409 PIK3R5Q8WYR1 880 aa7.52□□□□□ -1.21
RIPK1-202ENST00000380409 NEDD4P46934 1319 aa7.51□□□□□ -1.21
RIPK1-202ENST00000380409 SNX1Q13596 522 aa7.51□□□□□ -1.21
RIPK1-202ENST00000380409 GNL2Q13823 731 aaKnown RBP7.51□□□□□ -1.21
RIPK1-202ENST00000380409 CASP8Q14790 479 aa7.51□□□□□ -1.21
RIPK1-202ENST00000380409 RBBP5Q15291 538 aaKnown RBP7.51□□□□□ -1.21
RIPK1-202ENST00000380409 GOLGA1Q92805 767 aa7.51□□□□□ -1.21
RIPK1-202ENST00000380409 SYTL4Q96C24 671 aaPredicted RBP7.51□□□□□ -1.21
RIPK1-202ENST00000380409 DDX60Q8IY21 1712 aaKnown RBP7.51□□□□□ -1.21
RIPK1-202ENST00000380409 ADAMTSL3P82987 1691 aa7.51□□□□□ -1.21
RIPK1-202ENST00000380409 CEMIPQ8WUJ3 1361 aa7.51□□□□□ -1.21
RIPK1-202ENST00000380409 F6X3S4 739 aa7.51□□□□□ -1.21
RIPK1-202ENST00000380409 ZEB2O60315 1214 aa7.51□□□□□ -1.21
RIPK1-202ENST00000380409 SMNDC1O75940 238 aaKnown RBP eCLIP7.51□□□□□ -1.21
RIPK1-202ENST00000380409 PYGBP11216 843 aa7.51□□□□□ -1.21
RIPK1-202ENST00000380409 ABCD1P33897 745 aa7.51□□□□□ -1.21
RIPK1-202ENST00000380409 HSPA4P34932 840 aa7.51□□□□□ -1.21
RIPK1-202ENST00000380409 BRAPQ7Z569 592 aa7.51□□□□□ -1.21
RIPK1-202ENST00000380409 EVI5LQ96CN4 794 aa7.51□□□□□ -1.21
RIPK1-202ENST00000380409 TNMDQ9H2S6 317 aa7.51□□□□□ -1.21
RIPK1-202ENST00000380409 SUGCTQ9HAC7 445 aa7.51□□□□□ -1.21
RIPK1-202ENST00000380409 SLC39A2Q9NP94 309 aa7.51□□□□□ -1.21
RIPK1-202ENST00000380409 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.51□□□□□ -1.21
RIPK1-202ENST00000380409 BIN1O00499 593 aa7.51□□□□□ -1.21
RIPK1-202ENST00000380409 CCP110O43303 1012 aa7.51□□□□□ -1.21
RIPK1-202ENST00000380409 AHCYL1O43865 530 aa7.51□□□□□ -1.21
RIPK1-202ENST00000380409 GIGYF1O75420 1035 aaPredicted RBP7.51□□□□□ -1.21
RIPK1-202ENST00000380409 INPP5BP32019 993 aa7.51□□□□□ -1.21
RIPK1-202ENST00000380409 MRPL50Q8N5N7 158 aaKnown RBP7.51□□□□□ -1.21
RIPK1-202ENST00000380409 CEP112Q8N8E3 955 aa7.51□□□□□ -1.21
RIPK1-202ENST00000380409 WDR24Q96S15 920 aa7.51□□□□□ -1.21
RIPK1-202ENST00000380409 SH3GL2Q99962 352 aa7.51□□□□□ -1.21
RIPK1-202ENST00000380409 BPIFA3Q9BQP9 254 aa7.51□□□□□ -1.21
RIPK1-202ENST00000380409 CHCHD3Q9NX63 227 aaKnown RBP7.51□□□□□ -1.21
RIPK1-202ENST00000380409 DACT1Q9NYF0 836 aa7.51□□□□□ -1.21
RIPK1-202ENST00000380409 SLAIN2Q9P270 581 aa7.51□□□□□ -1.21
RIPK1-202ENST00000380409 MROH2AA6NES4 1674 aa7.5□□□□□ -1.21
RIPK1-202ENST00000380409 C3P01024 1663 aa7.5□□□□□ -1.21
RIPK1-202ENST00000380409 RNF40O75150 1001 aa7.5□□□□□ -1.21
RIPK1-202ENST00000380409 ECM2O94769 699 aaPredicted RBP7.5□□□□□ -1.21
RIPK1-202ENST00000380409 PSMD2Q13200 908 aa7.5□□□□□ -1.21
RIPK1-202ENST00000380409 SF3B2Q13435 895 aaKnown RBP7.5□□□□□ -1.21
RIPK1-202ENST00000380409 DHX8Q14562 1220 aaKnown RBP7.5□□□□□ -1.21
RIPK1-202ENST00000380409 RUFY3Q7L099 469 aa7.5□□□□□ -1.21
RIPK1-202ENST00000380409 CKAP2LQ8IYA6 745 aa7.5□□□□□ -1.21
RIPK1-202ENST00000380409 ABTB2Q8N961 1025 aa7.5□□□□□ -1.21
RIPK1-202ENST00000380409 AFAP1L1Q8TED9 768 aa7.5□□□□□ -1.21
RIPK1-202ENST00000380409 ABCB6Q9NP58 842 aa7.5□□□□□ -1.21
RIPK1-202ENST00000380409 KLC4Q9NSK0 619 aa7.5□□□□□ -1.21
RIPK1-202ENST00000380409 ADGRB3O60242 1522 aa7.5□□□□□ -1.21
RIPK1-202ENST00000380409 KDM6AO15550 1401 aaPredicted RBP7.5□□□□□ -1.21
RIPK1-202ENST00000380409 TSHZ3Q63HK5 1081 aa7.5□□□□□ -1.21
RIPK1-202ENST00000380409 MIS18BP1Q6P0N0 1132 aa7.5□□□□□ -1.21
RIPK1-202ENST00000380409 WDR93Q6P2C0 686 aa7.5□□□□□ -1.21
RIPK1-202ENST00000380409 LMBR1Q8WVP7 490 aa7.5□□□□□ -1.21
RIPK1-202ENST00000380409 C8orf37Q96NL8 207 aa7.5□□□□□ -1.21
RIPK1-202ENST00000380409 LARP6Q9BRS8 491 aaKnown RBP7.5□□□□□ -1.21
RIPK1-202ENST00000380409 BATF3Q9NR55 127 aa7.5□□□□□ -1.21
RIPK1-202ENST00000380409 PCDHGC5Q9Y5F6 944 aa7.5□□□□□ -1.21
RIPK1-202ENST00000380409 LAMA4Q16363 1823 aa7.5□□□□□ -1.21
RIPK1-202ENST00000380409 A0A1B0GUA9 196 aa7.5□□□□□ -1.21
RIPK1-202ENST00000380409 SPDYE3A6NKU9 549 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms