RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 SCNN1BP51168 640 aa9.66□□□□□ -0.86
NHLRC3-201ENST00000379599 HDGFP51858 240 aaKnown RBP9.66□□□□□ -0.86
NHLRC3-201ENST00000379599 PDCLQ13371 301 aa9.66□□□□□ -0.86
NHLRC3-201ENST00000379599 LRRC23Q53EV4 343 aaPredicted RBP9.66□□□□□ -0.86
NHLRC3-201ENST00000379599 TRIM42Q8IWZ5 723 aa9.66□□□□□ -0.86
NHLRC3-201ENST00000379599 MRPL50Q8N5N7 158 aaKnown RBP9.66□□□□□ -0.86
NHLRC3-201ENST00000379599 ANKRD44Q8N8A2 993 aa9.66□□□□□ -0.86
NHLRC3-201ENST00000379599 PLEKHG4BQ96PX9 1271 aa9.66□□□□□ -0.86
NHLRC3-201ENST00000379599 BAIAP2L1Q9UHR4 511 aa9.66□□□□□ -0.86
NHLRC3-201ENST00000379599 HOOK1Q9UJC3 728 aaKnown RBP9.66□□□□□ -0.86
NHLRC3-201ENST00000379599 CDC23Q9UJX2 597 aa9.66□□□□□ -0.86
NHLRC3-201ENST00000379599 HPCAL4Q9UM19 191 aa9.66□□□□□ -0.86
NHLRC3-201ENST00000379599 SNX14Q9Y5W7 946 aa9.66□□□□□ -0.86
NHLRC3-201ENST00000379599 DNMT1P26358 1616 aaKnown RBP9.66□□□□□ -0.86
NHLRC3-201ENST00000379599 EIF4E1BA6NMX2 242 aaKnown RBP9.65□□□□□ -0.86
NHLRC3-201ENST00000379599 MYO1BO43795 1136 aa9.65□□□□□ -0.86
NHLRC3-201ENST00000379599 FMNL1O95466 1100 aaPredicted RBP9.65□□□□□ -0.86
NHLRC3-201ENST00000379599 TOP1P11387 765 aaKnown RBP9.65□□□□□ -0.86
NHLRC3-201ENST00000379599 TTLL7Q6ZT98 887 aa9.65□□□□□ -0.86
NHLRC3-201ENST00000379599 BZW1Q7L1Q6 419 aaKnown RBP9.65□□□□□ -0.86
NHLRC3-201ENST00000379599 FAM228AQ86W67 206 aa9.65□□□□□ -0.86
NHLRC3-201ENST00000379599 SMARCC2Q8TAQ2 1214 aa9.65□□□□□ -0.86
NHLRC3-201ENST00000379599 PAPOLBQ9NRJ5 636 aaKnown RBP9.65□□□□□ -0.86
NHLRC3-201ENST00000379599 HAUS2Q9NVX0 235 aa9.65□□□□□ -0.86
NHLRC3-201ENST00000379599 TBC1D2BQ9UPU7 963 aa9.65□□□□□ -0.86
NHLRC3-201ENST00000379599 TRPC6Q9Y210 931 aa9.65□□□□□ -0.86
NHLRC3-201ENST00000379599 TARBP1Q13395 1621 aaKnown RBP9.65□□□□□ -0.86
NHLRC3-201ENST00000379599 SPDYE3A6NKU9 549 aa9.65□□□□□ -0.86
NHLRC3-201ENST00000379599 SMIM24O75264 130 aa9.65□□□□□ -0.86
NHLRC3-201ENST00000379599 PDCP20941 246 aa9.65□□□□□ -0.86
NHLRC3-201ENST00000379599 AARSP49588 968 aaKnown RBP eCLIP9.65□□□□□ -0.86
NHLRC3-201ENST00000379599 FANCCQ00597 558 aa9.65□□□□□ -0.86
NHLRC3-201ENST00000379599 CC2D2BQ6DHV5 1058 aa9.65□□□□□ -0.86
NHLRC3-201ENST00000379599 MIS18BP1Q6P0N0 1132 aa9.65□□□□□ -0.86
NHLRC3-201ENST00000379599 TOGARAM2Q6ZUX3 1019 aa9.65□□□□□ -0.86
NHLRC3-201ENST00000379599 ARHGAP22Q7Z5H3 698 aa9.65□□□□□ -0.86
NHLRC3-201ENST00000379599 SPATS2Q86XZ4 545 aaKnown RBP9.65□□□□□ -0.86
NHLRC3-201ENST00000379599 FAM81AQ8TBF8 368 aa9.65□□□□□ -0.86
NHLRC3-201ENST00000379599 HOOK2Q96ED9 719 aa9.65□□□□□ -0.86
NHLRC3-201ENST00000379599 BICD1Q96G01 975 aa9.65□□□□□ -0.86
NHLRC3-201ENST00000379599 TSC22D3Q99576 134 aa9.65□□□□□ -0.86
NHLRC3-201ENST00000379599 YIPF2Q9BWQ6 316 aa9.65□□□□□ -0.86
NHLRC3-201ENST00000379599 CLTCL1P53675 1640 aa9.65□□□□□ -0.86
NHLRC3-201ENST00000379599 IFT140Q96RY7 1462 aa9.65□□□□□ -0.86
NHLRC3-201ENST00000379599 GNAT1P11488 350 aa9.65□□□□□ -0.87
NHLRC3-201ENST00000379599 CWF19L1Q69YN2 538 aaKnown RBP9.65□□□□□ -0.87
NHLRC3-201ENST00000379599 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.65□□□□□ -0.87
NHLRC3-201ENST00000379599 CCDC121Q6ZUS5 278 aa9.65□□□□□ -0.87
NHLRC3-201ENST00000379599 RASEFQ8IZ41 740 aa9.65□□□□□ -0.87
NHLRC3-201ENST00000379599 TRIM58Q8NG06 486 aa9.65□□□□□ -0.87
NHLRC3-201ENST00000379599 TTC14Q96N46 770 aa9.65□□□□□ -0.87
NHLRC3-201ENST00000379599 OSBPL9Q96SU4 736 aa9.65□□□□□ -0.87
NHLRC3-201ENST00000379599 POLD4Q9HCU8 107 aa9.65□□□□□ -0.87
NHLRC3-201ENST00000379599 CUL7Q14999 1698 aa9.65□□□□□ -0.87
NHLRC3-201ENST00000379599 RBM47A0AV96 593 aaKnown RBP9.64□□□□□ -0.87
NHLRC3-201ENST00000379599 ZSCAN9O15535 394 aaPredicted RBP9.64□□□□□ -0.87
NHLRC3-201ENST00000379599 UBASH3AP57075 661 aa9.64□□□□□ -0.87
NHLRC3-201ENST00000379599 API5Q9BZZ5 524 aaKnown RBP9.64□□□□□ -0.87
NHLRC3-201ENST00000379599 VIPAS39Q9H9C1 493 aa9.64□□□□□ -0.87
NHLRC3-201ENST00000379599 GOLGA6BA6NDN3 693 aa9.64□□□□□ -0.87
NHLRC3-201ENST00000379599 AHCYL1O43865 530 aa9.64□□□□□ -0.87
NHLRC3-201ENST00000379599 UPP2O95045 317 aa9.64□□□□□ -0.87
NHLRC3-201ENST00000379599 MYL1P05976 194 aa9.64□□□□□ -0.87
NHLRC3-201ENST00000379599 ATP1A2P50993 1020 aa9.64□□□□□ -0.87
NHLRC3-201ENST00000379599 AMOTQ4VCS5 1084 aa9.64□□□□□ -0.87
NHLRC3-201ENST00000379599 ZNF569Q5MCW4 686 aa9.64□□□□□ -0.87
NHLRC3-201ENST00000379599 TSHZ1Q6ZSZ6 1077 aa9.64□□□□□ -0.87
NHLRC3-201ENST00000379599 FCHSD1Q86WN1 690 aa9.64□□□□□ -0.87
NHLRC3-201ENST00000379599 RPAP2Q8IXW5 612 aaPredicted RBP9.64□□□□□ -0.87
NHLRC3-201ENST00000379599 FUKQ8N0W3 1084 aa9.64□□□□□ -0.87
NHLRC3-201ENST00000379599 CCDC148Q8NFR7 591 aa9.64□□□□□ -0.87
NHLRC3-201ENST00000379599 ARHGAP45Q92619 1136 aa9.64□□□□□ -0.87
NHLRC3-201ENST00000379599 STAMBPL1Q96FJ0 436 aa9.64□□□□□ -0.87
NHLRC3-201ENST00000379599 TSPYL2Q9H2G4 693 aaPredicted RBP9.64□□□□□ -0.87
NHLRC3-201ENST00000379599 PCDHGC5Q9Y5F6 944 aa9.64□□□□□ -0.87
NHLRC3-201ENST00000379599 MED14O60244 1454 aa9.64□□□□□ -0.87
NHLRC3-201ENST00000379599 KIF5CO60282 957 aa9.64□□□□□ -0.87
NHLRC3-201ENST00000379599 ZMYND10O75800 440 aa9.64□□□□□ -0.87
NHLRC3-201ENST00000379599 ME3Q16798 604 aa9.64□□□□□ -0.87
NHLRC3-201ENST00000379599 MFN1Q8IWA4 741 aa9.64□□□□□ -0.87
NHLRC3-201ENST00000379599 TSPYL6Q8N831 410 aa9.64□□□□□ -0.87
NHLRC3-201ENST00000379599 NOA1Q8NC60 698 aaKnown RBP9.64□□□□□ -0.87
NHLRC3-201ENST00000379599 RASSF8Q8NHQ8 419 aa9.64□□□□□ -0.87
NHLRC3-201ENST00000379599 ATRIPQ8WXE1 791 aa9.64□□□□□ -0.87
NHLRC3-201ENST00000379599 ZSCAN31Q96LW9 406 aaPredicted RBP9.64□□□□□ -0.87
NHLRC3-201ENST00000379599 JAKMIP1Q96N16 626 aaKnown RBP9.64□□□□□ -0.87
NHLRC3-201ENST00000379599 MMADHCQ9H3L0 296 aaPredicted RBP9.64□□□□□ -0.87
NHLRC3-201ENST00000379599 IL16Q14005 1332 aa9.64□□□□□ -0.87
NHLRC3-201ENST00000379599 FESP07332 822 aa9.63□□□□□ -0.87
NHLRC3-201ENST00000379599 TUBBP07437 444 aa9.63□□□□□ -0.87
NHLRC3-201ENST00000379599 ATP1A3P13637 1013 aa9.63□□□□□ -0.87
NHLRC3-201ENST00000379599 DPCR1Q3MIW9 517 aa9.63□□□□□ -0.87
NHLRC3-201ENST00000379599 CEP85Q6P2H3 762 aa9.63□□□□□ -0.87
NHLRC3-201ENST00000379599 LARP1Q6PKG0 1096 aaKnown RBP9.63□□□□□ -0.87
NHLRC3-201ENST00000379599 RBM12BQ8IXT5 1001 aaKnown RBP9.63□□□□□ -0.87
NHLRC3-201ENST00000379599 CCDC47Q96A33 483 aaKnown RBP9.63□□□□□ -0.87
NHLRC3-201ENST00000379599 HYPKQ9NX55 129 aa9.63□□□□□ -0.87
NHLRC3-201ENST00000379599 GRIN2DO15399 1336 aa9.63□□□□□ -0.87
NHLRC3-201ENST00000379599 OPLAHO14841 1288 aa9.63□□□□□ -0.87
NHLRC3-201ENST00000379599 ZBED6P86452 979 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms