RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 LCORLQ8N3X6 602 aa17.76■□□□□ 0.43
SNX2-201ENST00000379516 MIGA1Q8NAN2 632 aa17.76■□□□□ 0.43
SNX2-201ENST00000379516 ZNF274Q96GC6 653 aaPredicted RBP17.76■□□□□ 0.43
SNX2-201ENST00000379516 NAPBQ9H115 298 aa17.76■□□□□ 0.43
SNX2-201ENST00000379516 GPHNQ9NQX3 736 aaPredicted RBP17.76■□□□□ 0.43
SNX2-201ENST00000379516 TFCP2L1Q9NZI6 479 aa17.76■□□□□ 0.43
SNX2-201ENST00000379516 CNPY2Q9Y2B0 182 aa17.76■□□□□ 0.43
SNX2-201ENST00000379516 A0A1B0GUL6 1792 aa17.76■□□□□ 0.43
SNX2-201ENST00000379516 PDIA3P30101 505 aaKnown RBP17.75■□□□□ 0.43
SNX2-201ENST00000379516 GRAPQ13588 217 aa17.75■□□□□ 0.43
SNX2-201ENST00000379516 CDC37L1Q7L3B6 337 aa17.75■□□□□ 0.43
SNX2-201ENST00000379516 TBC1D10CQ8IV04 446 aa17.75■□□□□ 0.43
SNX2-201ENST00000379516 PROM2Q8N271 834 aa17.75■□□□□ 0.43
SNX2-201ENST00000379516 GRAPLQ8TC17 118 aaPredicted RBP17.75■□□□□ 0.43
SNX2-201ENST00000379516 LLPHQ9BRT6 129 aaKnown RBP17.75■□□□□ 0.43
SNX2-201ENST00000379516 EPB41L4AQ9HCS5 686 aaPredicted RBP17.75■□□□□ 0.43
SNX2-201ENST00000379516 PRKAB2O43741 272 aa17.75■□□□□ 0.43
SNX2-201ENST00000379516 MBD3O95983 291 aa17.75■□□□□ 0.43
SNX2-201ENST00000379516 COL1A1P02452 1464 aaPredicted RBP17.75■□□□□ 0.43
SNX2-201ENST00000379516 SERPINB2P05120 415 aa17.75■□□□□ 0.43
SNX2-201ENST00000379516 GNAT2P19087 354 aa17.75■□□□□ 0.43
SNX2-201ENST00000379516 HIBADHP31937 336 aaKnown RBP17.75■□□□□ 0.43
SNX2-201ENST00000379516 ANTXR2P58335 489 aa17.75■□□□□ 0.43
SNX2-201ENST00000379516 DDX11Q96FC9 970 aa17.75■□□□□ 0.43
SNX2-201ENST00000379516 TNRC6CQ9HCJ0 1690 aaKnown RBP17.75■□□□□ 0.43
SNX2-201ENST00000379516 NSFL1CQ9UNZ2 370 aaKnown RBP17.75■□□□□ 0.43
SNX2-201ENST00000379516 SLC4A4Q9Y6R1 1079 aa17.75■□□□□ 0.43
SNX2-201ENST00000379516 ZMYM6O95789 1325 aa17.74■□□□□ 0.43
SNX2-201ENST00000379516 PNPLA7Q6ZV29 1317 aa17.74■□□□□ 0.43
SNX2-201ENST00000379516 GSG1L2A8MUP6 293 aa17.74■□□□□ 0.43
SNX2-201ENST00000379516 ST5P78524 1137 aa17.74■□□□□ 0.43
SNX2-201ENST00000379516 FAM184AQ8NB25 1140 aa17.74■□□□□ 0.43
SNX2-201ENST00000379516 NCOA5Q9HCD5 579 aaKnown RBP17.74■□□□□ 0.43
SNX2-201ENST00000379516 SEMA3EO15041 775 aa17.74■□□□□ 0.43
SNX2-201ENST00000379516 DNM1Q05193 864 aaKnown RBP17.74■□□□□ 0.43
SNX2-201ENST00000379516 FERMT3Q86UX7 667 aa17.74■□□□□ 0.43
SNX2-201ENST00000379516 NSUN7Q8NE18 718 aaKnown RBP17.74■□□□□ 0.43
SNX2-201ENST00000379516 SMARCC2Q8TAQ2 1214 aa17.74■□□□□ 0.43
SNX2-201ENST00000379516 NACAP1Q9BZK3 213 aa17.74■□□□□ 0.43
SNX2-201ENST00000379516 ANKIB1Q9P2G1 1089 aa17.74■□□□□ 0.43
SNX2-201ENST00000379516 RBM27Q9P2N5 1060 aaKnown RBP17.74■□□□□ 0.43
SNX2-201ENST00000379516 UBR3Q6ZT12 1888 aa17.74■□□□□ 0.43
SNX2-201ENST00000379516 GADD45BO75293 160 aaPredicted RBP17.73■□□□□ 0.43
SNX2-201ENST00000379516 ADGRA1Q86SQ6 560 aa17.73■□□□□ 0.43
SNX2-201ENST00000379516 RPGRQ92834 1020 aaKnown RBP17.73■□□□□ 0.43
SNX2-201ENST00000379516 ISY1Q9ULR0 285 aaKnown RBP17.73■□□□□ 0.43
SNX2-201ENST00000379516 CTDNEP1O95476 244 aa17.72■□□□□ 0.43
SNX2-201ENST00000379516 TDO2P48775 406 aa17.72■□□□□ 0.43
SNX2-201ENST00000379516 EVCP57679 992 aa17.72■□□□□ 0.43
SNX2-201ENST00000379516 ZSCAN23Q3MJ62 389 aa17.72■□□□□ 0.43
SNX2-201ENST00000379516 GAS2L3Q86XJ1 694 aa17.72■□□□□ 0.43
SNX2-201ENST00000379516 TMEM87AQ8NBN3 555 aa17.72■□□□□ 0.43
SNX2-201ENST00000379516 WDR19Q8NEZ3 1342 aa17.72■□□□□ 0.43
SNX2-201ENST00000379516 KLF18A0A0U1RQI7 1052 aa17.72■□□□□ 0.43
SNX2-201ENST00000379516 PTPDC1A2A3K4 754 aa17.72■□□□□ 0.43
SNX2-201ENST00000379516 FIBPO43427 364 aa17.72■□□□□ 0.43
SNX2-201ENST00000379516 HMGB2P26583 209 aaKnown RBP17.72■□□□□ 0.43
SNX2-201ENST00000379516 CHMP4CQ96CF2 233 aa17.72■□□□□ 0.43
SNX2-201ENST00000379516 BRPF3Q9ULD4 1205 aa17.72■□□□□ 0.43
SNX2-201ENST00000379516 MAGEB6P1A0A0J9YX57 407 aa17.71■□□□□ 0.43
SNX2-201ENST00000379516 B4E1Z4 1266 aa17.71■□□□□ 0.43
SNX2-201ENST00000379516 HMGN5P82970 282 aaKnown RBP17.71■□□□□ 0.43
SNX2-201ENST00000379516 CTDSPL2Q05D32 466 aa17.71■□□□□ 0.43
SNX2-201ENST00000379516 NAA16Q6N069 864 aaPredicted RBP17.71■□□□□ 0.43
SNX2-201ENST00000379516 CYB5R4Q7L1T6 521 aa17.71■□□□□ 0.43
SNX2-201ENST00000379516 SLC51AQ86UW1 340 aa17.71■□□□□ 0.43
SNX2-201ENST00000379516 TXNRD3Q86VQ6 643 aa17.71■□□□□ 0.43
SNX2-201ENST00000379516 H3BQV1 296 aa17.71■□□□□ 0.42
SNX2-201ENST00000379516 XRCC6P12956 609 aaKnown RBP eCLIP17.71■□□□□ 0.42
SNX2-201ENST00000379516 MRE11P49959 708 aa17.71■□□□□ 0.42
SNX2-201ENST00000379516 CHAF1AQ13111 956 aaPredicted RBP17.71■□□□□ 0.42
SNX2-201ENST00000379516 IFFO2Q5TF58 517 aa17.71■□□□□ 0.42
SNX2-201ENST00000379516 NKX2-3Q8TAU0 364 aa17.71■□□□□ 0.42
SNX2-201ENST00000379516 INCENPQ9NQS7 918 aa17.71■□□□□ 0.42
SNX2-201ENST00000379516 TMEM63CQ9P1W3 806 aa17.71■□□□□ 0.42
SNX2-201ENST00000379516 NEDD4P46934 1319 aa17.7■□□□□ 0.42
SNX2-201ENST00000379516 APBA3O96018 575 aa17.7■□□□□ 0.42
SNX2-201ENST00000379516 GRPEL1Q9HAV7 217 aa17.7■□□□□ 0.42
SNX2-201ENST00000379516 LEMD3Q9Y2U8 911 aa17.7■□□□□ 0.42
SNX2-201ENST00000379516 GOLGA8BA8MQT2 603 aa17.69■□□□□ 0.42
SNX2-201ENST00000379516 DDR1Q08345 913 aa17.69■□□□□ 0.42
SNX2-201ENST00000379516 CSPP1Q1MSJ5 1256 aa17.69■□□□□ 0.42
SNX2-201ENST00000379516 CRY2Q49AN0 593 aa17.69■□□□□ 0.42
SNX2-201ENST00000379516 KIF3AQ9Y496 699 aa17.69■□□□□ 0.42
SNX2-201ENST00000379516 PDS5AQ29RF7 1337 aaKnown RBP17.69■□□□□ 0.42
SNX2-201ENST00000379516 PPFIA3O75145 1194 aa17.69■□□□□ 0.42
SNX2-201ENST00000379516 ZNF445P59923 1031 aa17.69■□□□□ 0.42
SNX2-201ENST00000379516 TPRNQ4KMQ1 711 aa17.69■□□□□ 0.42
SNX2-201ENST00000379516 FAM173BQ6P4H8 233 aa17.69■□□□□ 0.42
SNX2-201ENST00000379516 SDR42E1Q8WUS8 393 aa17.69■□□□□ 0.42
SNX2-201ENST00000379516 RBM17Q96I25 401 aaKnown RBP17.69■□□□□ 0.42
SNX2-201ENST00000379516 ANGEL1Q9UNK9 670 aaKnown RBP17.69■□□□□ 0.42
SNX2-201ENST00000379516 XDHP47989 1333 aa17.68■□□□□ 0.42
SNX2-201ENST00000379516 IRS2Q9Y4H2 1338 aa17.68■□□□□ 0.42
SNX2-201ENST00000379516 POLRMTO00411 1230 aaKnown RBP17.68■□□□□ 0.42
SNX2-201ENST00000379516 PLSCR1O15162 318 aa17.68■□□□□ 0.42
SNX2-201ENST00000379516 DYNLL1P63167 89 aaKnown RBP17.68■□□□□ 0.42
SNX2-201ENST00000379516 AKNAD1Q5T1N1 836 aa17.68■□□□□ 0.42
SNX2-201ENST00000379516 MFSD6Q6ZSS7 791 aa17.68■□□□□ 0.42
SNX2-201ENST00000379516 RAB11FIP4Q86YS3 637 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 218 ms