RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 KIF28PB7ZC32 967 aa22.78■■□□□ 1.24
SHROOM1-202ENST00000378676 GOLGA6L19H0YKK7 550 aa22.78■■□□□ 1.24
SHROOM1-202ENST00000378676 POLR3DP05423 398 aaPredicted RBP22.78■■□□□ 1.24
SHROOM1-202ENST00000378676 SARM1Q6SZW1 724 aa22.78■■□□□ 1.24
SHROOM1-202ENST00000378676 TBC1D10CQ8IV04 446 aa22.78■■□□□ 1.24
SHROOM1-202ENST00000378676 LINC00301Q8NCQ3 95 aa22.78■■□□□ 1.24
SHROOM1-202ENST00000378676 SLIT2O94813 1529 aa22.77■■□□□ 1.24
SHROOM1-202ENST00000378676 A0A1B0GVL5 298 aa22.77■■□□□ 1.24
SHROOM1-202ENST00000378676 CDC25BP30305 580 aa22.77■■□□□ 1.24
SHROOM1-202ENST00000378676 DHX40Q8IX18 779 aaKnown RBP22.77■■□□□ 1.24
SHROOM1-202ENST00000378676 ZNF710Q8N1W2 664 aa22.77■■□□□ 1.24
SHROOM1-202ENST00000378676 FBXO18Q8NFZ0 1043 aa22.77■■□□□ 1.24
SHROOM1-202ENST00000378676 CNNM1Q9NRU3 951 aa22.77■■□□□ 1.24
SHROOM1-202ENST00000378676 CACTINQ8WUQ7 758 aaKnown RBP22.77■■□□□ 1.24
SHROOM1-202ENST00000378676 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.77■■□□□ 1.24
SHROOM1-202ENST00000378676 ANKRD18BA2A2Z9 1011 aa22.76■■□□□ 1.23
SHROOM1-202ENST00000378676 ZBTB1Q9Y2K1 713 aa22.76■■□□□ 1.23
SHROOM1-202ENST00000378676 IRS4O14654 1257 aaPredicted RBP22.76■■□□□ 1.23
SHROOM1-202ENST00000378676 NDUFA8P51970 172 aa22.76■■□□□ 1.23
SHROOM1-202ENST00000378676 SLC9C2Q5TAH2 1124 aa22.76■■□□□ 1.23
SHROOM1-202ENST00000378676 ADALQ6DHV7 355 aa22.76■■□□□ 1.23
SHROOM1-202ENST00000378676 CYB5R4Q7L1T6 521 aa22.76■■□□□ 1.23
SHROOM1-202ENST00000378676 NEDD4P46934 1319 aa22.76■■□□□ 1.23
SHROOM1-202ENST00000378676 WDR19Q8NEZ3 1342 aa22.76■■□□□ 1.23
SHROOM1-202ENST00000378676 CYP19A1P11511 503 aaPredicted RBP22.75■■□□□ 1.23
SHROOM1-202ENST00000378676 STK38Q15208 465 aa22.75■■□□□ 1.23
SHROOM1-202ENST00000378676 MYSM1Q5VVJ2 828 aa22.75■■□□□ 1.23
SHROOM1-202ENST00000378676 FBXW7Q969H0 707 aa22.75■■□□□ 1.23
SHROOM1-202ENST00000378676 BCL9O00512 1426 aa22.75■■□□□ 1.23
SHROOM1-202ENST00000378676 A0A1W2PQ27 194 aa22.75■■□□□ 1.23
SHROOM1-202ENST00000378676 A0A1W2PQ64 194 aa22.75■■□□□ 1.23
SHROOM1-202ENST00000378676 A0A1W2PQD8 194 aa22.75■■□□□ 1.23
SHROOM1-202ENST00000378676 DHX16O60231 1041 aaKnown RBP22.75■■□□□ 1.23
SHROOM1-202ENST00000378676 PHKA1P46020 1223 aa22.75■■□□□ 1.23
SHROOM1-202ENST00000378676 ANO10Q9NW15 660 aa22.75■■□□□ 1.23
SHROOM1-202ENST00000378676 ROBO1Q9Y6N7 1651 aa22.75■■□□□ 1.23
SHROOM1-202ENST00000378676 RIOK3O14730 519 aaKnown RBP22.74■■□□□ 1.23
SHROOM1-202ENST00000378676 CPLX1O14810 134 aa22.74■■□□□ 1.23
SHROOM1-202ENST00000378676 ARID3AQ99856 593 aa22.74■■□□□ 1.23
SHROOM1-202ENST00000378676 WNK3Q9BYP7 1800 aa22.74■■□□□ 1.23
SHROOM1-202ENST00000378676 DISP2A7MBM2 1401 aa22.74■■□□□ 1.23
SHROOM1-202ENST00000378676 DOT1LQ8TEK3 1739 aa22.74■■□□□ 1.23
SHROOM1-202ENST00000378676 IDH1O75874 414 aaKnown RBP22.74■■□□□ 1.23
SHROOM1-202ENST00000378676 ARID5BQ14865 1188 aa22.74■■□□□ 1.23
SHROOM1-202ENST00000378676 ZNF512BQ96KM6 892 aaPredicted RBP22.74■■□□□ 1.23
SHROOM1-202ENST00000378676 AIFM3Q96NN9 605 aa22.74■■□□□ 1.23
SHROOM1-202ENST00000378676 POLR3EQ9NVU0 708 aa22.74■■□□□ 1.23
SHROOM1-202ENST00000378676 WWC3Q9ULE0 1092 aa22.74■■□□□ 1.23
SHROOM1-202ENST00000378676 KIF23Q02241 960 aaPredicted RBP22.73■■□□□ 1.23
SHROOM1-202ENST00000378676 AOPEPQ8N6M6 819 aa22.73■■□□□ 1.23
SHROOM1-202ENST00000378676 MRFAP1L1Q96HT8 127 aa22.73■■□□□ 1.23
SHROOM1-202ENST00000378676 SENP2Q9HC62 589 aa22.73■■□□□ 1.23
SHROOM1-202ENST00000378676 TRMT112Q9UI30 125 aaKnown RBP22.73■■□□□ 1.23
SHROOM1-202ENST00000378676 ZNF532Q9HCE3 1301 aa22.73■■□□□ 1.23
SHROOM1-202ENST00000378676 PDE8BO95263 885 aa22.72■■□□□ 1.23
SHROOM1-202ENST00000378676 YEATS4O95619 227 aa22.72■■□□□ 1.23
SHROOM1-202ENST00000378676 PLCH1Q4KWH8 1693 aa22.72■■□□□ 1.23
SHROOM1-202ENST00000378676 CCDC102BQ68D86 513 aa22.72■■□□□ 1.23
SHROOM1-202ENST00000378676 UBN2Q6ZU65 1347 aa22.72■■□□□ 1.23
SHROOM1-202ENST00000378676 BTG4Q9NY30 223 aa22.72■■□□□ 1.23
SHROOM1-202ENST00000378676 ZMYM6O95789 1325 aa22.72■■□□□ 1.23
SHROOM1-202ENST00000378676 BECN2A8MW95 431 aa22.72■■□□□ 1.23
SHROOM1-202ENST00000378676 RXRAP19793 462 aa22.72■■□□□ 1.23
SHROOM1-202ENST00000378676 SF3A1Q15459 793 aaKnown RBP22.72■■□□□ 1.23
SHROOM1-202ENST00000378676 BRAPQ7Z569 592 aa22.72■■□□□ 1.23
SHROOM1-202ENST00000378676 SH2B2O14492 632 aaPredicted RBP22.71■■□□□ 1.23
SHROOM1-202ENST00000378676 SPTLC2O15270 562 aa22.71■■□□□ 1.23
SHROOM1-202ENST00000378676 PDE6AP16499 860 aa22.71■■□□□ 1.23
SHROOM1-202ENST00000378676 MTERF4Q7Z6M4 381 aaKnown RBP22.71■■□□□ 1.23
SHROOM1-202ENST00000378676 CEP57L1Q8IYX8 460 aa22.71■■□□□ 1.23
SHROOM1-202ENST00000378676 KCNG4Q8TDN1 519 aa22.71■■□□□ 1.23
SHROOM1-202ENST00000378676 C16orf45Q96MC5 204 aaPredicted RBP22.71■■□□□ 1.23
SHROOM1-202ENST00000378676 BCL2L12Q9HB09 334 aa22.71■■□□□ 1.23
SHROOM1-202ENST00000378676 ANGEL1Q9UNK9 670 aaKnown RBP22.71■■□□□ 1.23
SHROOM1-202ENST00000378676 MROH7-TTC4A0A0A0MT08 1334 aa22.71■■□□□ 1.23
SHROOM1-202ENST00000378676 PHLPP1O60346 1717 aa22.71■■□□□ 1.23
SHROOM1-202ENST00000378676 ARID4AP29374 1257 aaPredicted RBP22.71■■□□□ 1.23
SHROOM1-202ENST00000378676 TTF1Q15361 905 aaPredicted RBP22.71■■□□□ 1.23
SHROOM1-202ENST00000378676 TCRBV5S4A2TA0A5A2 114 aa22.7■■□□□ 1.22
SHROOM1-202ENST00000378676 CHAF1AQ13111 956 aaPredicted RBP22.7■■□□□ 1.22
SHROOM1-202ENST00000378676 UBE3CQ15386 1083 aa22.7■■□□□ 1.22
SHROOM1-202ENST00000378676 HELBQ8NG08 1087 aaPredicted RBP22.7■■□□□ 1.22
SHROOM1-202ENST00000378676 SDF4Q9BRK5 362 aa22.7■■□□□ 1.22
SHROOM1-202ENST00000378676 B4E1Z4 1266 aa22.7■■□□□ 1.22
SHROOM1-202ENST00000378676 PDE8AO60658 829 aa22.7■■□□□ 1.22
SHROOM1-202ENST00000378676 APPP05067 770 aa22.7■■□□□ 1.22
SHROOM1-202ENST00000378676 TRDNQ13061 729 aa22.7■■□□□ 1.22
SHROOM1-202ENST00000378676 TBC1D2BQ9UPU7 963 aa22.7■■□□□ 1.22
SHROOM1-202ENST00000378676 TIAM2Q8IVF5 1701 aa22.69■■□□□ 1.22
SHROOM1-202ENST00000378676 ANO1Q5XXA6 986 aa22.69■■□□□ 1.22
SHROOM1-202ENST00000378676 AHDC1Q5TGY3 1603 aaPredicted RBP22.69■■□□□ 1.22
SHROOM1-202ENST00000378676 CDC27P30260 824 aa22.69■■□□□ 1.22
SHROOM1-202ENST00000378676 DPCR1Q3MIW9 517 aa22.69■■□□□ 1.22
SHROOM1-202ENST00000378676 LRRC8AQ8IWT6 810 aa22.69■■□□□ 1.22
SHROOM1-202ENST00000378676 COL14A1Q05707 1796 aaKnown RBP22.69■■□□□ 1.22
SHROOM1-202ENST00000378676 METAP2P50579 478 aaKnown RBP eCLIP22.68■■□□□ 1.22
SHROOM1-202ENST00000378676 AXDND1Q5T1B0 1012 aaPredicted RBP22.68■■□□□ 1.22
SHROOM1-202ENST00000378676 APOA5Q6Q788 366 aa22.68■■□□□ 1.22
SHROOM1-202ENST00000378676 INCENPQ9NQS7 918 aa22.68■■□□□ 1.22
SHROOM1-202ENST00000378676 KIAA1468Q9P260 1216 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms