RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 ASAP1Q9ULH1 1129 aa21.17■□□□□ 0.98
TDP2-202ENST00000378198 NUP98P52948 1817 aa21.17■□□□□ 0.98
TDP2-202ENST00000378198 SPTLC2O15270 562 aa21.17■□□□□ 0.98
TDP2-202ENST00000378198 SYNE3Q6ZMZ3 975 aa21.17■□□□□ 0.98
TDP2-202ENST00000378198 PIGBQ92521 554 aa21.17■□□□□ 0.98
TDP2-202ENST00000378198 TSC1Q92574 1164 aa21.17■□□□□ 0.98
TDP2-202ENST00000378198 BCL2L12Q9HB09 334 aa21.17■□□□□ 0.98
TDP2-202ENST00000378198 A0A1B0GVL5 298 aa21.16■□□□□ 0.98
TDP2-202ENST00000378198 POLR3DP05423 398 aaPredicted RBP21.16■□□□□ 0.98
TDP2-202ENST00000378198 NLRP10Q86W26 655 aa21.16■□□□□ 0.98
TDP2-202ENST00000378198 CTIFO43310 598 aaKnown RBP21.16■□□□□ 0.98
TDP2-202ENST00000378198 NDUFA8P51970 172 aa21.16■□□□□ 0.98
TDP2-202ENST00000378198 UBE3CQ15386 1083 aa21.16■□□□□ 0.98
TDP2-202ENST00000378198 CCDC94Q9BW85 323 aaPredicted RBP21.16■□□□□ 0.98
TDP2-202ENST00000378198 GREM2Q9H772 168 aa21.16■□□□□ 0.98
TDP2-202ENST00000378198 CNNM1Q9NRU3 951 aa21.16■□□□□ 0.98
TDP2-202ENST00000378198 LRP6O75581 1613 aa21.15■□□□□ 0.98
TDP2-202ENST00000378198 CTSWP56202 376 aa21.15■□□□□ 0.98
TDP2-202ENST00000378198 SLC9C2Q5TAH2 1124 aa21.15■□□□□ 0.98
TDP2-202ENST00000378198 KIAA1468Q9P260 1216 aa21.15■□□□□ 0.98
TDP2-202ENST00000378198 SLAIN2Q9P270 581 aa21.15■□□□□ 0.98
TDP2-202ENST00000378198 ZMYM6O95789 1325 aa21.14■□□□□ 0.98
TDP2-202ENST00000378198 SMTNL1A8MU46 457 aa21.14■□□□□ 0.98
TDP2-202ENST00000378198 RBM6P78332 1123 aaKnown RBP21.14■□□□□ 0.98
TDP2-202ENST00000378198 KIF23Q02241 960 aaPredicted RBP21.14■□□□□ 0.98
TDP2-202ENST00000378198 ZRSR1Q15695 479 aaKnown RBP21.14■□□□□ 0.98
TDP2-202ENST00000378198 HLFQ16534 295 aa21.14■□□□□ 0.98
TDP2-202ENST00000378198 AOPEPQ8N6M6 819 aa21.14■□□□□ 0.98
TDP2-202ENST00000378198 VGLL2Q8N8G2 317 aa21.14■□□□□ 0.98
TDP2-202ENST00000378198 BPIFA3Q9BQP9 254 aa21.14■□□□□ 0.98
TDP2-202ENST00000378198 ANGEL1Q9UNK9 670 aaKnown RBP21.14■□□□□ 0.98
TDP2-202ENST00000378198 CHD4Q14839 1912 aa21.14■□□□□ 0.98
TDP2-202ENST00000378198 ARAP2Q8WZ64 1704 aa21.14■□□□□ 0.97
TDP2-202ENST00000378198 ECM29Q5VYK3 1845 aa21.14■□□□□ 0.97
TDP2-202ENST00000378198 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.14■□□□□ 0.97
TDP2-202ENST00000378198 TNNT1P13805 278 aa21.14■□□□□ 0.97
TDP2-202ENST00000378198 ANO1Q5XXA6 986 aa21.14■□□□□ 0.97
TDP2-202ENST00000378198 SYNE4Q8N205 404 aa21.14■□□□□ 0.97
TDP2-202ENST00000378198 C16orf45Q96MC5 204 aaPredicted RBP21.14■□□□□ 0.97
TDP2-202ENST00000378198 PAXBP1Q9Y5B6 917 aa21.14■□□□□ 0.97
TDP2-202ENST00000378198 CDKL5O76039 1030 aa21.13■□□□□ 0.97
TDP2-202ENST00000378198 TPD52L1Q16890 204 aaPredicted RBP21.13■□□□□ 0.97
TDP2-202ENST00000378198 NBPF3Q9H094 633 aa21.13■□□□□ 0.97
TDP2-202ENST00000378198 PDE8BO95263 885 aa21.13■□□□□ 0.97
TDP2-202ENST00000378198 UQCRFS1P1P0C7P4 283 aa21.13■□□□□ 0.97
TDP2-202ENST00000378198 GPTP24298 496 aa21.13■□□□□ 0.97
TDP2-202ENST00000378198 KIF28PB7ZC32 967 aa21.12■□□□□ 0.97
TDP2-202ENST00000378198 IRS4O14654 1257 aaPredicted RBP21.12■□□□□ 0.97
TDP2-202ENST00000378198 CMA1P23946 247 aa21.12■□□□□ 0.97
TDP2-202ENST00000378198 ARID4AP29374 1257 aaPredicted RBP21.12■□□□□ 0.97
TDP2-202ENST00000378198 RAB11FIP4Q86YS3 637 aa21.12■□□□□ 0.97
TDP2-202ENST00000378198 TBC1D2BQ9UPU7 963 aa21.12■□□□□ 0.97
TDP2-202ENST00000378198 A0A087WWV3 80 aa21.11■□□□□ 0.97
TDP2-202ENST00000378198 SH2B2O14492 632 aaPredicted RBP21.11■□□□□ 0.97
TDP2-202ENST00000378198 PDE8AO60658 829 aa21.11■□□□□ 0.97
TDP2-202ENST00000378198 METAP2P50579 478 aaKnown RBP eCLIP21.11■□□□□ 0.97
TDP2-202ENST00000378198 CPLX2Q6PUV4 134 aaKnown RBP21.11■□□□□ 0.97
TDP2-202ENST00000378198 ERCC4Q92889 916 aaPredicted RBP21.11■□□□□ 0.97
TDP2-202ENST00000378198 TMEM87BQ96K49 555 aa21.11■□□□□ 0.97
TDP2-202ENST00000378198 PIH1D3Q9NQM4 214 aaKnown RBP21.11■□□□□ 0.97
TDP2-202ENST00000378198 DOCK2Q92608 1830 aa21.11■□□□□ 0.97
TDP2-202ENST00000378198 ZNF202O95125 648 aa21.11■□□□□ 0.97
TDP2-202ENST00000378198 SLC3A2P08195 630 aaKnown RBP21.11■□□□□ 0.97
TDP2-202ENST00000378198 SYCP1Q15431 976 aa21.11■□□□□ 0.97
TDP2-202ENST00000378198 AXDND1Q5T1B0 1012 aaPredicted RBP21.11■□□□□ 0.97
TDP2-202ENST00000378198 CYB5R4Q7L1T6 521 aa21.11■□□□□ 0.97
TDP2-202ENST00000378198 TBC1D10CQ8IV04 446 aa21.11■□□□□ 0.97
TDP2-202ENST00000378198 ANKRD7Q92527 254 aa21.11■□□□□ 0.97
TDP2-202ENST00000378198 ZNF532Q9HCE3 1301 aa21.1■□□□□ 0.97
TDP2-202ENST00000378198 FAM177BA6PVY3 158 aa21.1■□□□□ 0.97
TDP2-202ENST00000378198 IDH1O75874 414 aaKnown RBP21.1■□□□□ 0.97
TDP2-202ENST00000378198 APPP05067 770 aa21.1■□□□□ 0.97
TDP2-202ENST00000378198 GSDMDP57764 484 aa21.1■□□□□ 0.97
TDP2-202ENST00000378198 NLRP12P59046 1061 aa21.1■□□□□ 0.97
TDP2-202ENST00000378198 SLC39A14Q15043 492 aa21.1■□□□□ 0.97
TDP2-202ENST00000378198 ALG1Q9BT22 464 aa21.1■□□□□ 0.97
TDP2-202ENST00000378198 GJB4Q9NTQ9 266 aa21.1■□□□□ 0.97
TDP2-202ENST00000378198 IMPACTQ9P2X3 320 aa21.1■□□□□ 0.97
TDP2-202ENST00000378198 TRMT112Q9UI30 125 aaKnown RBP21.1■□□□□ 0.97
TDP2-202ENST00000378198 NEDD4P46934 1319 aa21.1■□□□□ 0.97
TDP2-202ENST00000378198 CCDC69A6NI79 296 aa21.09■□□□□ 0.97
TDP2-202ENST00000378198 CYP19A1P11511 503 aaPredicted RBP21.09■□□□□ 0.97
TDP2-202ENST00000378198 SKILP12757 684 aa21.09■□□□□ 0.97
TDP2-202ENST00000378198 HSPA2P54652 639 aa21.09■□□□□ 0.97
TDP2-202ENST00000378198 CCDC102BQ68D86 513 aa21.09■□□□□ 0.97
TDP2-202ENST00000378198 TIGD1Q96MW7 591 aa21.09■□□□□ 0.97
TDP2-202ENST00000378198 PDE6AP16499 860 aa21.09■□□□□ 0.97
TDP2-202ENST00000378198 ALX1Q15699 326 aa21.09■□□□□ 0.97
TDP2-202ENST00000378198 LRP5O75197 1615 aa21.08■□□□□ 0.97
TDP2-202ENST00000378198 NHSL1Q5SYE7 1610 aa21.08■□□□□ 0.97
TDP2-202ENST00000378198 PFKFB1P16118 471 aa21.08■□□□□ 0.97
TDP2-202ENST00000378198 TPM4P67936 248 aa21.08■□□□□ 0.97
TDP2-202ENST00000378198 DPCR1Q3MIW9 517 aa21.08■□□□□ 0.97
TDP2-202ENST00000378198 APOA5Q6Q788 366 aa21.08■□□□□ 0.97
TDP2-202ENST00000378198 FILIP1Q7Z7B0 1213 aa21.08■□□□□ 0.97
TDP2-202ENST00000378198 OSBPL5Q9H0X9 879 aaPredicted RBP21.08■□□□□ 0.97
TDP2-202ENST00000378198 TCRBV5S4A2TA0A5A2 114 aa21.08■□□□□ 0.96
TDP2-202ENST00000378198 ERVV-1B6SEH8 477 aa21.08■□□□□ 0.96
TDP2-202ENST00000378198 PPP6R2O75170 966 aa21.08■□□□□ 0.96
TDP2-202ENST00000378198 PHKA1P46020 1223 aa21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms