RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 R3HCC1Q9Y3T6 440 aaKnown RBP9.48□□□□□ -0.89
CKAP2-203ENST00000378037 KIF3AQ9Y496 699 aa9.48□□□□□ -0.89
CKAP2-203ENST00000378037 NCAPD2Q15021 1401 aa9.48□□□□□ -0.89
CKAP2-203ENST00000378037 LRP6O75581 1613 aa9.48□□□□□ -0.89
CKAP2-203ENST00000378037 A0A1B0GVL5 298 aa9.48□□□□□ -0.89
CKAP2-203ENST00000378037 RBM10P98175 930 aaKnown RBP9.48□□□□□ -0.89
CKAP2-203ENST00000378037 SAFBQ15424 915 aaKnown RBP eCLIP9.48□□□□□ -0.89
CKAP2-203ENST00000378037 C3orf67Q6ZVT6 689 aa9.48□□□□□ -0.89
CKAP2-203ENST00000378037 TSPY26PQ9H489 355 aa9.48□□□□□ -0.89
CKAP2-203ENST00000378037 NFAT5O94916 1531 aa9.48□□□□□ -0.89
CKAP2-203ENST00000378037 MAST3O60307 1309 aa9.48□□□□□ -0.89
CKAP2-203ENST00000378037 E7EWF7 191 aa9.48□□□□□ -0.89
CKAP2-203ENST00000378037 COBLO75128 1261 aa9.48□□□□□ -0.89
CKAP2-203ENST00000378037 SMC2O95347 1197 aa9.48□□□□□ -0.89
CKAP2-203ENST00000378037 GOLGA8HP0CJ92 632 aa9.48□□□□□ -0.89
CKAP2-203ENST00000378037 PRDX5P30044 214 aa9.48□□□□□ -0.89
CKAP2-203ENST00000378037 RPS8P62241 208 aaKnown RBP9.48□□□□□ -0.89
CKAP2-203ENST00000378037 AMOTL1Q8IY63 956 aa9.48□□□□□ -0.89
CKAP2-203ENST00000378037 COPRSQ9NQ92 184 aa9.48□□□□□ -0.89
CKAP2-203ENST00000378037 PDE8BO95263 885 aa9.47□□□□□ -0.89
CKAP2-203ENST00000378037 IL6STP40189 918 aaPredicted RBP9.47□□□□□ -0.89
CKAP2-203ENST00000378037 FOXO4P98177 505 aa9.47□□□□□ -0.89
CKAP2-203ENST00000378037 KIAA2012Q0VF49 1180 aa9.47□□□□□ -0.89
CKAP2-203ENST00000378037 KIAA0825Q8IV33 1275 aa9.47□□□□□ -0.89
CKAP2-203ENST00000378037 CCAR2Q8N163 923 aaKnown RBP9.47□□□□□ -0.89
CKAP2-203ENST00000378037 NCOA7Q8NI08 942 aa9.47□□□□□ -0.89
CKAP2-203ENST00000378037 MXD3Q9BW11 206 aa9.47□□□□□ -0.89
CKAP2-203ENST00000378037 CTNNA3Q9UI47 895 aa9.47□□□□□ -0.89
CKAP2-203ENST00000378037 KDM6AO15550 1401 aaPredicted RBP9.47□□□□□ -0.89
CKAP2-203ENST00000378037 USP17L12C9JPN9 530 aa9.47□□□□□ -0.89
CKAP2-203ENST00000378037 USP17L21D6R901 530 aa9.47□□□□□ -0.89
CKAP2-203ENST00000378037 F13A1P00488 732 aa9.47□□□□□ -0.89
CKAP2-203ENST00000378037 SLURP2P0DP57 97 aa9.47□□□□□ -0.89
CKAP2-203ENST00000378037 PDE6AP16499 860 aa9.47□□□□□ -0.89
CKAP2-203ENST00000378037 GTF2IP78347 998 aa9.47□□□□□ -0.89
CKAP2-203ENST00000378037 ATP5JP18859 108 aa9.46□□□□□ -0.89
CKAP2-203ENST00000378037 PDCP20941 246 aa9.46□□□□□ -0.89
CKAP2-203ENST00000378037 PUM3Q15397 648 aaKnown RBP9.46□□□□□ -0.89
CKAP2-203ENST00000378037 FSIP1Q8NA03 581 aa9.46□□□□□ -0.89
CKAP2-203ENST00000378037 SNX21Q969T3 373 aa9.46□□□□□ -0.89
CKAP2-203ENST00000378037 TTC12Q9H892 705 aaPredicted RBP9.46□□□□□ -0.89
CKAP2-203ENST00000378037 DBNDD1Q9H9R9 158 aa9.46□□□□□ -0.89
CKAP2-203ENST00000378037 NMT2O60551 498 aa9.46□□□□□ -0.89
CKAP2-203ENST00000378037 CDK11BP21127 795 aaKnown RBP9.46□□□□□ -0.89
CKAP2-203ENST00000378037 RPS6KB1P23443 525 aa9.46□□□□□ -0.89
CKAP2-203ENST00000378037 MCM5P33992 734 aa9.46□□□□□ -0.89
CKAP2-203ENST00000378037 ATG9AQ7Z3C6 839 aa9.46□□□□□ -0.89
CKAP2-203ENST00000378037 TGFBRAP1Q8WUH2 860 aa9.46□□□□□ -0.89
CKAP2-203ENST00000378037 ALG1Q9BT22 464 aa9.46□□□□□ -0.89
CKAP2-203ENST00000378037 NUP62CLQ9H1M0 184 aa9.46□□□□□ -0.89
CKAP2-203ENST00000378037 BCL9O00512 1426 aa9.46□□□□□ -0.9
CKAP2-203ENST00000378037 PCNTO95613 3336 aa9.46□□□□□ -0.9
CKAP2-203ENST00000378037 H7C1W4 665 aa9.46□□□□□ -0.9
CKAP2-203ENST00000378037 IARSP41252 1262 aaKnown RBP9.46□□□□□ -0.9
CKAP2-203ENST00000378037 KRT32Q14532 448 aa9.46□□□□□ -0.9
CKAP2-203ENST00000378037 FNBP4Q8N3X1 1017 aaPredicted RBP9.46□□□□□ -0.9
CKAP2-203ENST00000378037 LCORLQ8N3X6 602 aa9.46□□□□□ -0.9
CKAP2-203ENST00000378037 ARHGEF1Q92888 912 aaKnown RBP9.46□□□□□ -0.9
CKAP2-203ENST00000378037 RBSNQ9H1K0 784 aa9.46□□□□□ -0.9
CKAP2-203ENST00000378037 FAM13BQ9NYF5 915 aa9.46□□□□□ -0.9
CKAP2-203ENST00000378037 HMG20BQ9P0W2 317 aa9.46□□□□□ -0.9
CKAP2-203ENST00000378037 MAGEB6P1A0A0J9YX57 407 aa9.45□□□□□ -0.9
CKAP2-203ENST00000378037 ZBTB43O43298 467 aa9.45□□□□□ -0.9
CKAP2-203ENST00000378037 PCCAP05165 728 aaPredicted RBP9.45□□□□□ -0.9
CKAP2-203ENST00000378037 CYP2E1P05181 493 aaPredicted RBP9.45□□□□□ -0.9
CKAP2-203ENST00000378037 CYP2D6P10635 497 aa9.45□□□□□ -0.9
CKAP2-203ENST00000378037 ANKRD1Q15327 319 aa9.45□□□□□ -0.9
CKAP2-203ENST00000378037 TPD52L1Q16890 204 aaPredicted RBP9.45□□□□□ -0.9
CKAP2-203ENST00000378037 DHX32Q7L7V1 743 aaKnown RBP9.45□□□□□ -0.9
CKAP2-203ENST00000378037 TRIM22Q8IYM9 498 aa9.45□□□□□ -0.9
CKAP2-203ENST00000378037 SLC44A5Q8NCS7 719 aa9.45□□□□□ -0.9
CKAP2-203ENST00000378037 LINC00116Q8NCU8 138 aa9.45□□□□□ -0.9
CKAP2-203ENST00000378037 GPT2Q8TD30 523 aa9.45□□□□□ -0.9
CKAP2-203ENST00000378037 DNAJC25Q9H1X3 360 aa9.45□□□□□ -0.9
CKAP2-203ENST00000378037 VEZTQ9HBM0 779 aa9.45□□□□□ -0.9
CKAP2-203ENST00000378037 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.45□□□□□ -0.98e-7■■■■□ 20
CKAP2-203ENST00000378037 UBN2Q6ZU65 1347 aa9.45□□□□□ -0.9
CKAP2-203ENST00000378037 CEMIPQ8WUJ3 1361 aa9.45□□□□□ -0.9
CKAP2-203ENST00000378037 AFMP43652 599 aa9.45□□□□□ -0.9
CKAP2-203ENST00000378037 NFIXQ14938 502 aa9.45□□□□□ -0.9
CKAP2-203ENST00000378037 CRACR2BQ8N4Y2 399 aaPredicted RBP9.45□□□□□ -0.9
CKAP2-203ENST00000378037 DYNLL2Q96FJ2 89 aa9.45□□□□□ -0.9
CKAP2-203ENST00000378037 SENP2Q9HC62 589 aa9.45□□□□□ -0.9
CKAP2-203ENST00000378037 ATF5Q9Y2D1 282 aaPredicted RBP9.45□□□□□ -0.9
CKAP2-203ENST00000378037 HIBADHP31937 336 aaKnown RBP9.45□□□□□ -0.9
CKAP2-203ENST00000378037 WTAPQ15007 396 aa9.45□□□□□ -0.9
CKAP2-203ENST00000378037 ZSCAN25Q6NSZ9 544 aa9.45□□□□□ -0.9
CKAP2-203ENST00000378037 LUZP1Q86V48 1076 aa9.45□□□□□ -0.9
CKAP2-203ENST00000378037 SMARCC1Q92922 1105 aaPredicted RBP9.45□□□□□ -0.9
CKAP2-203ENST00000378037 ZFP91Q96JP5 570 aaPredicted RBP9.45□□□□□ -0.9
CKAP2-203ENST00000378037 ZC3H12CQ9C0D7 883 aaKnown RBP9.45□□□□□ -0.9
CKAP2-203ENST00000378037 CIZ1Q9ULV3 898 aaPredicted RBP9.45□□□□□ -0.9
CKAP2-203ENST00000378037 MAPK8IP1Q9UQF2 711 aa9.45□□□□□ -0.9
CKAP2-203ENST00000378037 LTN1O94822 1766 aa9.45□□□□□ -0.9
CKAP2-203ENST00000378037 CHMP4BP1P59074 171 aa9.44□□□□□ -0.9
CKAP2-203ENST00000378037 CCDC96Q2M329 555 aa9.44□□□□□ -0.9
CKAP2-203ENST00000378037 CLEC10AQ8IUN9 316 aa9.44□□□□□ -0.9
CKAP2-203ENST00000378037 HAUS7Q99871 368 aa9.44□□□□□ -0.9
CKAP2-203ENST00000378037 BABAM1Q9NWV8 329 aa9.44□□□□□ -0.9
CKAP2-203ENST00000378037 SBF2Q86WG5 1849 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms