RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 CLEC4GQ6UXB4 293 aa5.59□□□□□ -1.52
PCDH9-201ENST00000377861 GFM2Q969S9 779 aaKnown RBP5.59□□□□□ -1.52
PCDH9-201ENST00000377861 ARHGAP24Q8N264 748 aa5.59□□□□□ -1.52
PCDH9-201ENST00000377861 MIS12Q9H081 205 aa5.59□□□□□ -1.52
PCDH9-201ENST00000377861 FOSP01100 380 aaPredicted RBP5.59□□□□□ -1.52
PCDH9-201ENST00000377861 ZNF530Q6P9A1 599 aaPredicted RBP5.59□□□□□ -1.52
PCDH9-201ENST00000377861 PLCB1Q9NQ66 1216 aa5.59□□□□□ -1.52
PCDH9-201ENST00000377861 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.59□□□□□ -1.52
PCDH9-201ENST00000377861 ERCC6LQ2NKX8 1250 aa5.59□□□□□ -1.52
PCDH9-201ENST00000377861 TSC1Q92574 1164 aa5.59□□□□□ -1.52
PCDH9-201ENST00000377861 BBOF1Q8ND07 529 aa5.58□□□□□ -1.52
PCDH9-201ENST00000377861 CFAP221Q4G0U5 840 aa5.58□□□□□ -1.52
PCDH9-201ENST00000377861 CCHCR1Q8TD31 782 aa5.58□□□□□ -1.52
PCDH9-201ENST00000377861 POP5Q969H6 163 aaKnown RBP5.58□□□□□ -1.52
PCDH9-201ENST00000377861 CCDC42Q96M95 316 aa5.58□□□□□ -1.52
PCDH9-201ENST00000377861 BCL2L13Q9BXK5 485 aa5.58□□□□□ -1.52
PCDH9-201ENST00000377861 RASAL2Q9UJF2 1139 aa5.58□□□□□ -1.52
PCDH9-201ENST00000377861 CNOT10Q9H9A5 744 aaKnown RBP5.58□□□□□ -1.52
PCDH9-201ENST00000377861 ZBTB43O43298 467 aa5.58□□□□□ -1.52
PCDH9-201ENST00000377861 PFKFB2O60825 505 aa5.58□□□□□ -1.52
PCDH9-201ENST00000377861 IPO4Q8TEX9 1081 aaKnown RBP5.58□□□□□ -1.52
PCDH9-201ENST00000377861 TARSL2A2RTX5 802 aaKnown RBP5.58□□□□□ -1.52
PCDH9-201ENST00000377861 KIF3CO14782 793 aa5.58□□□□□ -1.52
PCDH9-201ENST00000377861 JRKLQ9Y4A0 524 aa5.58□□□□□ -1.52
PCDH9-201ENST00000377861 EIF2S2P20042 333 aaKnown RBP5.58□□□□□ -1.52
PCDH9-201ENST00000377861 APBB1O00213 710 aa5.58□□□□□ -1.52
PCDH9-201ENST00000377861 NBPF14Q5TI25 921 aa5.58□□□□□ -1.52
PCDH9-201ENST00000377861 ERVV-1B6SEH8 477 aa5.58□□□□□ -1.52
PCDH9-201ENST00000377861 HACD3Q9P035 362 aa5.58□□□□□ -1.52
PCDH9-201ENST00000377861 SEC63Q9UGP8 760 aaKnown RBP5.58□□□□□ -1.52
PCDH9-201ENST00000377861 LEO1Q8WVC0 666 aaPredicted RBP5.58□□□□□ -1.52
PCDH9-201ENST00000377861 TSR2Q969E8 191 aaKnown RBP5.58□□□□□ -1.52
PCDH9-201ENST00000377861 LGSNQ5TDP6 509 aa5.58□□□□□ -1.52
PCDH9-201ENST00000377861 KCNH3Q9ULD8 1083 aa5.58□□□□□ -1.52
PCDH9-201ENST00000377861 USPL1Q5W0Q7 1092 aa5.58□□□□□ -1.52
PCDH9-201ENST00000377861 ARHGEF40Q8TER5 1519 aa5.58□□□□□ -1.52
PCDH9-201ENST00000377861 SNRPFP62306 86 aaKnown RBP5.58□□□□□ -1.52
PCDH9-201ENST00000377861 SMC1AQ14683 1233 aaKnown RBP5.58□□□□□ -1.52
PCDH9-201ENST00000377861 SNRKQ9NRH2 765 aa5.58□□□□□ -1.52
PCDH9-201ENST00000377861 PZPP20742 1482 aa5.58□□□□□ -1.52
PCDH9-201ENST00000377861 TRPM2O94759 1503 aa5.58□□□□□ -1.52
PCDH9-201ENST00000377861 TPCN1Q9ULQ1 816 aa5.58□□□□□ -1.52
PCDH9-201ENST00000377861 HOXC6P09630 235 aa5.58□□□□□ -1.52
PCDH9-201ENST00000377861 IPO5O00410 1097 aaKnown RBP5.58□□□□□ -1.52
PCDH9-201ENST00000377861 SLC5A1P13866 664 aa5.58□□□□□ -1.52
PCDH9-201ENST00000377861 REREQ9P2R6 1566 aa5.58□□□□□ -1.52
PCDH9-201ENST00000377861 N4BP3O15049 544 aa5.58□□□□□ -1.52
PCDH9-201ENST00000377861 SPZ1Q9BXG8 430 aa5.58□□□□□ -1.52
PCDH9-201ENST00000377861 EVCP57679 992 aa5.58□□□□□ -1.52
PCDH9-201ENST00000377861 BAG1Q99933 345 aaPredicted RBP5.58□□□□□ -1.52
PCDH9-201ENST00000377861 CENPHQ9H3R5 247 aa5.58□□□□□ -1.52
PCDH9-201ENST00000377861 LUC7L3O95232 432 aaKnown RBP5.58□□□□□ -1.52
PCDH9-201ENST00000377861 EEF1GP26641 437 aaKnown RBP5.58□□□□□ -1.52
PCDH9-201ENST00000377861 CNGA1P29973 690 aa5.58□□□□□ -1.52
PCDH9-201ENST00000377861 GIMAP7Q8NHV1 300 aa5.58□□□□□ -1.52
PCDH9-201ENST00000377861 MPHOSPH6Q99547 160 aaKnown RBP5.58□□□□□ -1.52
PCDH9-201ENST00000377861 NT5C3AQ9H0P0 336 aa5.58□□□□□ -1.52
PCDH9-201ENST00000377861 CNNM4Q6P4Q7 775 aa5.58□□□□□ -1.52
PCDH9-201ENST00000377861 ZNF526Q8TF50 670 aaPredicted RBP5.58□□□□□ -1.52
PCDH9-201ENST00000377861 METTL22Q9BUU2 404 aaPredicted RBP5.58□□□□□ -1.52
PCDH9-201ENST00000377861 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.58□□□□□ -1.52
PCDH9-201ENST00000377861 TAOK1Q7L7X3 1001 aa5.57□□□□□ -1.52
PCDH9-201ENST00000377861 LRRC10BA6NIK2 292 aa5.57□□□□□ -1.52
PCDH9-201ENST00000377861 A0A1B0GUL7 405 aa5.57□□□□□ -1.52
PCDH9-201ENST00000377861 LRRC8AQ8IWT6 810 aa5.57□□□□□ -1.52
PCDH9-201ENST00000377861 C1orf131Q8NDD1 294 aaKnown RBP5.57□□□□□ -1.52
PCDH9-201ENST00000377861 AKR1B15C9JRZ8 316 aaPredicted RBP5.57□□□□□ -1.52
PCDH9-201ENST00000377861 C20orf194Q5TEA3 1177 aa5.57□□□□□ -1.52
PCDH9-201ENST00000377861 ANO9A1A5B4 782 aa5.57□□□□□ -1.52
PCDH9-201ENST00000377861 DDIT3P35638 169 aa5.57□□□□□ -1.52
PCDH9-201ENST00000377861 FNBP4Q8N3X1 1017 aaPredicted RBP5.57□□□□□ -1.52
PCDH9-201ENST00000377861 SYN2Q92777 582 aaPredicted RBP5.57□□□□□ -1.52
PCDH9-201ENST00000377861 CCDC169A6NNP5 214 aa5.57□□□□□ -1.52
PCDH9-201ENST00000377861 KIF1CO43896 1103 aaKnown RBP5.57□□□□□ -1.52
PCDH9-201ENST00000377861 GNG11P61952 73 aa5.57□□□□□ -1.52
PCDH9-201ENST00000377861 NAPBQ9H115 298 aa5.57□□□□□ -1.52
PCDH9-201ENST00000377861 MAP3K9P80192 1104 aa5.57□□□□□ -1.52
PCDH9-201ENST00000377861 PPP4R3CPQ6ZMV5 832 aa5.57□□□□□ -1.52
PCDH9-201ENST00000377861 LARSQ9P2J5 1176 aaKnown RBP5.57□□□□□ -1.52
PCDH9-201ENST00000377861 MAP3K15Q6ZN16 1313 aa5.57□□□□□ -1.52
PCDH9-201ENST00000377861 PPFIA4O75335 1185 aa5.57□□□□□ -1.52
PCDH9-201ENST00000377861 URI1O94763 535 aaPredicted RBP5.57□□□□□ -1.52
PCDH9-201ENST00000377861 PPP1R12AO14974 1030 aaPredicted RBP5.57□□□□□ -1.52
PCDH9-201ENST00000377861 EMBQ6PCB8 327 aa5.57□□□□□ -1.52
PCDH9-201ENST00000377861 CCDC152Q4G0S7 254 aa5.57□□□□□ -1.52
PCDH9-201ENST00000377861 NOC2LQ9Y3T9 749 aaKnown RBP5.57□□□□□ -1.52
PCDH9-201ENST00000377861 NSRP1Q9H0G5 558 aaKnown RBP5.57□□□□□ -1.52
PCDH9-201ENST00000377861 C6orf50Q9HD87 102 aa5.57□□□□□ -1.52
PCDH9-201ENST00000377861 DISP3Q9P2K9 1392 aa5.57□□□□□ -1.52
PCDH9-201ENST00000377861 SMAPO00193 183 aa5.57□□□□□ -1.52
PCDH9-201ENST00000377861 TRIM34Q9BYJ4 488 aa5.57□□□□□ -1.52
PCDH9-201ENST00000377861 BPIFB4P59827 614 aa5.57□□□□□ -1.52
PCDH9-201ENST00000377861 NBPF6Q5VWK0 638 aa5.57□□□□□ -1.52
PCDH9-201ENST00000377861 NBPF4Q96M43 638 aa5.57□□□□□ -1.52
PCDH9-201ENST00000377861 CREB3L3Q68CJ9 461 aa5.57□□□□□ -1.52
PCDH9-201ENST00000377861 USP44Q9H0E7 712 aa5.57□□□□□ -1.52
PCDH9-201ENST00000377861 PDILTQ8N807 584 aa5.57□□□□□ -1.52
PCDH9-201ENST00000377861 HSF2BPO75031 334 aa5.57□□□□□ -1.52
PCDH9-201ENST00000377861 EFCAB13Q8IY85 973 aa5.57□□□□□ -1.52
PCDH9-201ENST00000377861 TTC39CQ8N584 583 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms