RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 LRRC24Q50LG9 513 aa24.13■■□□□ 1.45
CBWD3-204ENST00000377349 FBXO33Q7Z6M2 555 aa24.13■■□□□ 1.45
CBWD3-204ENST00000377349 TDRD3Q9H7E2 651 aaKnown RBP24.13■■□□□ 1.45
CBWD3-204ENST00000377349 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.13■■□□□ 1.45
CBWD3-204ENST00000377349 RBBP6Q7Z6E9 1792 aaKnown RBP24.13■■□□□ 1.45
CBWD3-204ENST00000377349 IREB2P48200 963 aaKnown RBP24.12■■□□□ 1.45
CBWD3-204ENST00000377349 DZIP1LQ8IYY4 767 aaKnown RBP24.12■■□□□ 1.45
CBWD3-204ENST00000377349 CDCA7LQ96GN5 454 aa24.11■■□□□ 1.45
CBWD3-204ENST00000377349 CRKP46108 304 aa24.1■■□□□ 1.45
CBWD3-204ENST00000377349 ANKRD13AQ8IZ07 590 aa24.1■■□□□ 1.45
CBWD3-204ENST00000377349 PTPN18Q99952 460 aa24.1■■□□□ 1.45
CBWD3-204ENST00000377349 IQSEC3Q9UPP2 1182 aaPredicted RBP24.1■■□□□ 1.45
CBWD3-204ENST00000377349 TESPA1A2RU30 521 aaPredicted RBP24.1■■□□□ 1.45
CBWD3-204ENST00000377349 TNFAIP1Q13829 316 aa24.1■■□□□ 1.45
CBWD3-204ENST00000377349 SLFN5Q08AF3 891 aa24.09■■□□□ 1.45
CBWD3-204ENST00000377349 KLHDC4Q8TBB5 520 aa24.09■■□□□ 1.45
CBWD3-204ENST00000377349 TMEM39BQ9GZU3 492 aa24.09■■□□□ 1.45
CBWD3-204ENST00000377349 PTPRCP08575 1304 aa24.08■■□□□ 1.45
CBWD3-204ENST00000377349 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.08■■□□□ 1.44
CBWD3-204ENST00000377349 SSH1Q8WYL5 1049 aa24.08■■□□□ 1.44
CBWD3-204ENST00000377349 USP44Q9H0E7 712 aa24.08■■□□□ 1.44
CBWD3-204ENST00000377349 TCP10L2B9ZVM9 353 aa24.07■■□□□ 1.44
CBWD3-204ENST00000377349 PDE8BO95263 885 aa24.07■■□□□ 1.44
CBWD3-204ENST00000377349 CAP1Q01518 475 aa24.07■■□□□ 1.44
CBWD3-204ENST00000377349 CRHR2Q13324 411 aa24.07■■□□□ 1.44
CBWD3-204ENST00000377349 METTL24Q5JXM2 366 aa24.07■■□□□ 1.44
CBWD3-204ENST00000377349 OTOP1Q7RTM1 612 aa24.07■■□□□ 1.44
CBWD3-204ENST00000377349 MS4A4AQ96JQ5 239 aa24.07■■□□□ 1.44
CBWD3-204ENST00000377349 ELP3Q9H9T3 547 aa24.07■■□□□ 1.44
CBWD3-204ENST00000377349 CCER2I3L3R5 266 aa24.06■■□□□ 1.44
CBWD3-204ENST00000377349 CNKSR2Q8WXI2 1034 aa24.06■■□□□ 1.44
CBWD3-204ENST00000377349 OPTNQ96CV9 577 aa24.06■■□□□ 1.44
CBWD3-204ENST00000377349 SMC4Q9NTJ3 1288 aa24.06■■□□□ 1.44
CBWD3-204ENST00000377349 FGFR2P21802 821 aa24.05■■□□□ 1.44
CBWD3-204ENST00000377349 BCAMP50895 628 aa24.05■■□□□ 1.44
CBWD3-204ENST00000377349 HDLBPQ00341 1268 aaKnown RBP24.05■■□□□ 1.44
CBWD3-204ENST00000377349 CHAF1AQ13111 956 aaPredicted RBP24.05■■□□□ 1.44
CBWD3-204ENST00000377349 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.05■■□□□ 1.44
CBWD3-204ENST00000377349 TRIM17Q9Y577 477 aa24.05■■□□□ 1.44
CBWD3-204ENST00000377349 AK9Q5TCS8 1911 aa24.05■■□□□ 1.44
CBWD3-204ENST00000377349 RFX5P48382 616 aaPredicted RBP24.04■■□□□ 1.44
CBWD3-204ENST00000377349 VPS37DQ86XT2 251 aa24.04■■□□□ 1.44
CBWD3-204ENST00000377349 TBC1D22AQ8WUA7 517 aa24.04■■□□□ 1.44
CBWD3-204ENST00000377349 ZSWIM8A7E2V4 1837 aa24.04■■□□□ 1.44
CBWD3-204ENST00000377349 CACNB3P54284 484 aa24.03■■□□□ 1.44
CBWD3-204ENST00000377349 VGLL4Q14135 290 aa24.03■■□□□ 1.44
CBWD3-204ENST00000377349 KIF16BQ96L93 1317 aa24.03■■□□□ 1.44
CBWD3-204ENST00000377349 CAVIN4Q5BKX8 364 aa24.02■■□□□ 1.44
CBWD3-204ENST00000377349 CD99L2Q8TCZ2 262 aa24.02■■□□□ 1.44
CBWD3-204ENST00000377349 BRI3BPQ8WY22 251 aa24.02■■□□□ 1.44
CBWD3-204ENST00000377349 PRPF38BQ5VTL8 546 aaKnown RBP24.01■■□□□ 1.43
CBWD3-204ENST00000377349 TEKT1Q969V4 418 aa24.01■■□□□ 1.43
CBWD3-204ENST00000377349 ZDHHC15Q96MV8 337 aa24.01■■□□□ 1.43
CBWD3-204ENST00000377349 TNNI2P48788 182 aa24.01■■□□□ 1.43
CBWD3-204ENST00000377349 MAP3K9P80192 1104 aa24.01■■□□□ 1.43
CBWD3-204ENST00000377349 OTUD7BQ6GQQ9 843 aa24.01■■□□□ 1.43
CBWD3-204ENST00000377349 APOBEC3HQ6NTF7 200 aaKnown RBP24.01■■□□□ 1.43
CBWD3-204ENST00000377349 ERO1AQ96HE7 468 aa24.01■■□□□ 1.43
CBWD3-204ENST00000377349 MRIQ9BWK5 157 aa24.01■■□□□ 1.43
CBWD3-204ENST00000377349 PUM3Q15397 648 aaKnown RBP24■■□□□ 1.43
CBWD3-204ENST00000377349 PTPN22Q9Y2R2 807 aa24■■□□□ 1.43
CBWD3-204ENST00000377349 MYH2Q9UKX2 1941 aa23.99■■□□□ 1.43
CBWD3-204ENST00000377349 FRAT2O75474 233 aaPredicted RBP23.99■■□□□ 1.43
CBWD3-204ENST00000377349 SNCAIPQ9Y6H5 919 aa23.99■■□□□ 1.43
CBWD3-204ENST00000377349 EYA2O00167 538 aa23.98■■□□□ 1.43
CBWD3-204ENST00000377349 SP3Q02447 781 aa23.98■■□□□ 1.43
CBWD3-204ENST00000377349 ATG9AQ7Z3C6 839 aa23.98■■□□□ 1.43
CBWD3-204ENST00000377349 SUGT1Q9Y2Z0 365 aa23.98■■□□□ 1.43
CBWD3-204ENST00000377349 CCL15-CCL14A0A0B4J2E2 113 aa23.97■■□□□ 1.43
CBWD3-204ENST00000377349 POTEFA5A3E0 1075 aa23.97■■□□□ 1.43
CBWD3-204ENST00000377349 CCL15Q16663 113 aa23.97■■□□□ 1.43
CBWD3-204ENST00000377349 ALDH1L2Q3SY69 923 aa23.97■■□□□ 1.43
CBWD3-204ENST00000377349 FKBP1CQ5VVH2 108 aa23.97■■□□□ 1.43
CBWD3-204ENST00000377349 FAM83AQ86UY5 434 aa23.97■■□□□ 1.43
CBWD3-204ENST00000377349 FAM43AQ8N2R8 423 aa23.97■■□□□ 1.43
CBWD3-204ENST00000377349 OTUD5Q96G74 571 aa23.97■■□□□ 1.43
CBWD3-204ENST00000377349 RPAP1Q9BWH6 1393 aaPredicted RBP23.97■■□□□ 1.43
CBWD3-204ENST00000377349 SPDYE5A6NIY4 337 aa23.96■■□□□ 1.43
CBWD3-204ENST00000377349 IFIT1P09914 478 aaKnown RBP23.96■■□□□ 1.43
CBWD3-204ENST00000377349 HHIPL2Q6UWX4 724 aa23.96■■□□□ 1.43
CBWD3-204ENST00000377349 CSADQ9Y600 493 aa23.96■■□□□ 1.43
CBWD3-204ENST00000377349 MAST3O60307 1309 aa23.95■■□□□ 1.42
CBWD3-204ENST00000377349 GTF2A2P52657 109 aa23.95■■□□□ 1.42
CBWD3-204ENST00000377349 TRMT2AQ8IZ69 625 aaKnown RBP23.95■■□□□ 1.42
CBWD3-204ENST00000377349 ARMC5Q96C12 935 aa23.95■■□□□ 1.42
CBWD3-204ENST00000377349 EFCC1Q9HA90 598 aa23.95■■□□□ 1.42
CBWD3-204ENST00000377349 CEP290O15078 2479 aa23.95■■□□□ 1.42
CBWD3-204ENST00000377349 LPIN2Q92539 896 aa23.94■■□□□ 1.42
CBWD3-204ENST00000377349 DOCK2Q92608 1830 aa23.93■■□□□ 1.42
CBWD3-204ENST00000377349 TAF1CQ15572 869 aaPredicted RBP23.93■■□□□ 1.42
CBWD3-204ENST00000377349 INTS3Q68E01 1043 aaKnown RBP23.93■■□□□ 1.42
CBWD3-204ENST00000377349 ZKSCAN4Q969J2 545 aaPredicted RBP23.93■■□□□ 1.42
CBWD3-204ENST00000377349 WRNIP1Q96S55 665 aa23.93■■□□□ 1.42
CBWD3-204ENST00000377349 NOB1Q9ULX3 412 aaKnown RBP23.93■■□□□ 1.42
CBWD3-204ENST00000377349 SLC5A1P13866 664 aa23.93■■□□□ 1.42
CBWD3-204ENST00000377349 TMOD2Q9NZR1 351 aa23.93■■□□□ 1.42
CBWD3-204ENST00000377349 DIEXFQ68CQ4 756 aaKnown RBP23.92■■□□□ 1.42
CBWD3-204ENST00000377349 ERO1BQ86YB8 467 aa23.92■■□□□ 1.42
CBWD3-204ENST00000377349 WDR66Q8TBY9 1149 aa23.92■■□□□ 1.42
CBWD3-204ENST00000377349 PTPRFP10586 1907 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms