RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 IQSEC3Q9UPP2 1182 aaPredicted RBP23.18■■□□□ 1.3
HDAC6-202ENST00000376610 AOX1Q06278 1338 aa23.17■■□□□ 1.3
HDAC6-202ENST00000376610 USP2O75604 605 aaPredicted RBP23.16■■□□□ 1.3
HDAC6-202ENST00000376610 IFIT1P09914 478 aaKnown RBP23.16■■□□□ 1.3
HDAC6-202ENST00000376610 ALDH1L2Q3SY69 923 aa23.16■■□□□ 1.3
HDAC6-202ENST00000376610 FBXO46Q6PJ61 603 aaPredicted RBP23.16■■□□□ 1.3
HDAC6-202ENST00000376610 TCP10L2B9ZVM9 353 aa23.15■■□□□ 1.3
HDAC6-202ENST00000376610 HDLBPQ00341 1268 aaKnown RBP23.15■■□□□ 1.3
HDAC6-202ENST00000376610 SLFN5Q08AF3 891 aa23.15■■□□□ 1.3
HDAC6-202ENST00000376610 PUM3Q15397 648 aaKnown RBP23.15■■□□□ 1.3
HDAC6-202ENST00000376610 TEKT1Q969V4 418 aa23.15■■□□□ 1.3
HDAC6-202ENST00000376610 USP44Q9H0E7 712 aa23.15■■□□□ 1.3
HDAC6-202ENST00000376610 SMC4Q9NTJ3 1288 aa23.15■■□□□ 1.3
HDAC6-202ENST00000376610 LAMB1P07942 1786 aa23.14■■□□□ 1.3
HDAC6-202ENST00000376610 MAST3O60307 1309 aa23.14■■□□□ 1.3
HDAC6-202ENST00000376610 VGLL2Q8N8G2 317 aa23.14■■□□□ 1.29
HDAC6-202ENST00000376610 KLHDC4Q8TBB5 520 aa23.14■■□□□ 1.29
HDAC6-202ENST00000376610 R3HDMLQ9H3Y0 253 aa23.14■■□□□ 1.29
HDAC6-202ENST00000376610 TMOD2Q9NZR1 351 aa23.14■■□□□ 1.29
HDAC6-202ENST00000376610 KIF16BQ96L93 1317 aa23.13■■□□□ 1.29
HDAC6-202ENST00000376610 IGF2BP3O00425 579 aaKnown RBP eCLIP23.12■■□□□ 1.29
HDAC6-202ENST00000376610 BCAMP50895 628 aa23.12■■□□□ 1.29
HDAC6-202ENST00000376610 TMEM39BQ9GZU3 492 aa23.12■■□□□ 1.29
HDAC6-202ENST00000376610 ELP3Q9H9T3 547 aa23.12■■□□□ 1.29
HDAC6-202ENST00000376610 OTOFQ9HC10 1997 aa23.12■■□□□ 1.29
HDAC6-202ENST00000376610 EYA2O00167 538 aa23.11■■□□□ 1.29
HDAC6-202ENST00000376610 SLC5A1P13866 664 aa23.11■■□□□ 1.29
HDAC6-202ENST00000376610 OPTNQ96CV9 577 aa23.11■■□□□ 1.29
HDAC6-202ENST00000376610 SUGT1Q9Y2Z0 365 aa23.11■■□□□ 1.29
HDAC6-202ENST00000376610 CSADQ9Y600 493 aa23.11■■□□□ 1.29
HDAC6-202ENST00000376610 MYH13Q9UKX3 1938 aa23.1■■□□□ 1.29
HDAC6-202ENST00000376610 GRIK5Q16478 980 aa23.1■■□□□ 1.29
HDAC6-202ENST00000376610 HOOK2Q96ED9 719 aa23.1■■□□□ 1.29
HDAC6-202ENST00000376610 ERO1AQ96HE7 468 aa23.1■■□□□ 1.29
HDAC6-202ENST00000376610 TEPSINQ96N21 525 aa23.1■■□□□ 1.29
HDAC6-202ENST00000376610 UBTFL1P0CB47 393 aaPredicted RBP23.09■■□□□ 1.29
HDAC6-202ENST00000376610 MAP3K9P80192 1104 aa23.09■■□□□ 1.29
HDAC6-202ENST00000376610 LPIN2Q92539 896 aa23.09■■□□□ 1.29
HDAC6-202ENST00000376610 MRIQ9BWK5 157 aa23.09■■□□□ 1.29
HDAC6-202ENST00000376610 HDAC5Q9UQL6 1122 aa23.09■■□□□ 1.29
HDAC6-202ENST00000376610 TRIM17Q9Y577 477 aa23.09■■□□□ 1.29
HDAC6-202ENST00000376610 CT47B1P0C2W7 299 aaPredicted RBP23.08■■□□□ 1.29
HDAC6-202ENST00000376610 FGFR2P21802 821 aa23.08■■□□□ 1.29
HDAC6-202ENST00000376610 GJA5P36382 358 aa23.08■■□□□ 1.29
HDAC6-202ENST00000376610 CDCA7LQ96GN5 454 aa23.08■■□□□ 1.29
HDAC6-202ENST00000376610 ZDHHC15Q96MV8 337 aa23.08■■□□□ 1.29
HDAC6-202ENST00000376610 TNRC18O15417 2968 aaPredicted RBP23.07■■□□□ 1.28
HDAC6-202ENST00000376610 TESPA1A2RU30 521 aaPredicted RBP23.07■■□□□ 1.28
HDAC6-202ENST00000376610 CRHR2Q13324 411 aa23.07■■□□□ 1.28
HDAC6-202ENST00000376610 VGLL4Q14135 290 aa23.07■■□□□ 1.28
HDAC6-202ENST00000376610 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.07■■□□□ 1.28
HDAC6-202ENST00000376610 CDAN1Q8IWY9 1227 aa23.07■■□□□ 1.28
HDAC6-202ENST00000376610 WDR66Q8TBY9 1149 aa23.07■■□□□ 1.28
HDAC6-202ENST00000376610 WDHD1O75717 1129 aaPredicted RBP23.06■■□□□ 1.28
HDAC6-202ENST00000376610 RFX5P48382 616 aaPredicted RBP23.06■■□□□ 1.28
HDAC6-202ENST00000376610 GTF2A2P52657 109 aa23.06■■□□□ 1.28
HDAC6-202ENST00000376610 CACNB3P54284 484 aa23.06■■□□□ 1.28
HDAC6-202ENST00000376610 FKBP1CQ5VVH2 108 aa23.06■■□□□ 1.28
HDAC6-202ENST00000376610 HHIPL2Q6UWX4 724 aa23.06■■□□□ 1.28
HDAC6-202ENST00000376610 FAM83AQ86UY5 434 aa23.06■■□□□ 1.28
HDAC6-202ENST00000376610 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.06■■□□□ 1.28
HDAC6-202ENST00000376610 GNL3LQ9NVN8 582 aaKnown RBP23.06■■□□□ 1.28
HDAC6-202ENST00000376610 FBXO3Q9UK99 471 aa23.06■■□□□ 1.28
HDAC6-202ENST00000376610 OTOP1Q7RTM1 612 aa23.05■■□□□ 1.28
HDAC6-202ENST00000376610 API5Q9BZZ5 524 aaKnown RBP23.05■■□□□ 1.28
HDAC6-202ENST00000376610 CEP126Q9P2H0 1117 aa23.05■■□□□ 1.28
HDAC6-202ENST00000376610 CCL15-CCL14A0A0B4J2E2 113 aa23.04■■□□□ 1.28
HDAC6-202ENST00000376610 SP3Q02447 781 aa23.04■■□□□ 1.28
HDAC6-202ENST00000376610 CCL15Q16663 113 aa23.04■■□□□ 1.28
HDAC6-202ENST00000376610 DCAF15Q66K64 600 aa23.04■■□□□ 1.28
HDAC6-202ENST00000376610 OTUD5Q96G74 571 aa23.04■■□□□ 1.28
HDAC6-202ENST00000376610 PTPN18Q99952 460 aa23.04■■□□□ 1.28
HDAC6-202ENST00000376610 SIL1Q9H173 461 aa23.04■■□□□ 1.28
HDAC6-202ENST00000376610 CIAO1O76071 339 aa23.03■■□□□ 1.28
HDAC6-202ENST00000376610 ARHGEF6Q15052 776 aa23.03■■□□□ 1.28
HDAC6-202ENST00000376610 ATP2B3Q16720 1220 aa23.03■■□□□ 1.28
HDAC6-202ENST00000376610 APOBEC3HQ6NTF7 200 aaKnown RBP23.03■■□□□ 1.28
HDAC6-202ENST00000376610 CD99L2Q8TCZ2 262 aa23.03■■□□□ 1.28
HDAC6-202ENST00000376610 EFCC1Q9HA90 598 aa23.03■■□□□ 1.28
HDAC6-202ENST00000376610 ZFYVE28Q9HCC9 887 aa23.03■■□□□ 1.28
HDAC6-202ENST00000376610 NOB1Q9ULX3 412 aaKnown RBP23.03■■□□□ 1.28
HDAC6-202ENST00000376610 TAF1CQ15572 869 aaPredicted RBP23.02■■□□□ 1.28
HDAC6-202ENST00000376610 INTS3Q68E01 1043 aaKnown RBP23.02■■□□□ 1.28
HDAC6-202ENST00000376610 ATG9AQ7Z3C6 839 aa23.02■■□□□ 1.28
HDAC6-202ENST00000376610 TRMT2AQ8IZ69 625 aaKnown RBP23.02■■□□□ 1.28
HDAC6-202ENST00000376610 CNKSR2Q8WXI2 1034 aa23.02■■□□□ 1.28
HDAC6-202ENST00000376610 MS4A4AQ96JQ5 239 aa23.02■■□□□ 1.28
HDAC6-202ENST00000376610 WRNIP1Q96S55 665 aa23.02■■□□□ 1.28
HDAC6-202ENST00000376610 RPAP1Q9BWH6 1393 aaPredicted RBP23.01■■□□□ 1.27
HDAC6-202ENST00000376610 SLC34A2O95436 690 aa23.01■■□□□ 1.27
HDAC6-202ENST00000376610 ERO1BQ86YB8 467 aa23.01■■□□□ 1.27
HDAC6-202ENST00000376610 BRI3BPQ8WY22 251 aa23.01■■□□□ 1.27
HDAC6-202ENST00000376610 AK9Q5TCS8 1911 aa23■■□□□ 1.27
HDAC6-202ENST00000376610 SPDYE5A6NIY4 337 aa23■■□□□ 1.27
HDAC6-202ENST00000376610 IL15P40933 162 aaPredicted RBP23■■□□□ 1.27
HDAC6-202ENST00000376610 PTPN22Q9Y2R2 807 aa23■■□□□ 1.27
HDAC6-202ENST00000376610 LRRFIP2Q9Y608 721 aaKnown RBP23■■□□□ 1.27
HDAC6-202ENST00000376610 LDHBP07195 334 aaKnown RBP22.99■■□□□ 1.27
HDAC6-202ENST00000376610 CETPP11597 493 aa22.99■■□□□ 1.27
HDAC6-202ENST00000376610 ZNF341Q9BYN7 854 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms