RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 PTPRCP08575 1304 aa18.81■□□□□ 0.6
CLCN6-204ENST00000376491 CRKP46108 304 aa18.81■□□□□ 0.6
CLCN6-204ENST00000376491 TNFAIP1Q13829 316 aa18.81■□□□□ 0.6
CLCN6-204ENST00000376491 KLHDC4Q8TBB5 520 aa18.81■□□□□ 0.6
CLCN6-204ENST00000376491 SSH1Q8WYL5 1049 aa18.81■□□□□ 0.6
CLCN6-204ENST00000376491 USP44Q9H0E7 712 aa18.81■□□□□ 0.6
CLCN6-204ENST00000376491 PDE8BO95263 885 aa18.8■□□□□ 0.6
CLCN6-204ENST00000376491 METTL24Q5JXM2 366 aa18.8■□□□□ 0.6
CLCN6-204ENST00000376491 ANKRD13AQ8IZ07 590 aa18.8■□□□□ 0.6
CLCN6-204ENST00000376491 TCP10L2B9ZVM9 353 aa18.79■□□□□ 0.6
CLCN6-204ENST00000376491 CHAF1AQ13111 956 aaPredicted RBP18.79■□□□□ 0.6
CLCN6-204ENST00000376491 VPS37DQ86XT2 251 aa18.79■□□□□ 0.6
CLCN6-204ENST00000376491 PTPN18Q99952 460 aa18.79■□□□□ 0.6
CLCN6-204ENST00000376491 E9PSI1 815 aa18.78■□□□□ 0.6
CLCN6-204ENST00000376491 BCAMP50895 628 aa18.78■□□□□ 0.6
CLCN6-204ENST00000376491 SLFN5Q08AF3 891 aa18.78■□□□□ 0.6
CLCN6-204ENST00000376491 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.78■□□□□ 0.6
CLCN6-204ENST00000376491 TMEM39BQ9GZU3 492 aa18.78■□□□□ 0.6
CLCN6-204ENST00000376491 ELP3Q9H9T3 547 aa18.78■□□□□ 0.6
CLCN6-204ENST00000376491 TESPA1A2RU30 521 aaPredicted RBP18.77■□□□□ 0.6
CLCN6-204ENST00000376491 FGFR2P21802 821 aa18.77■□□□□ 0.6
CLCN6-204ENST00000376491 RFX5P48382 616 aaPredicted RBP18.77■□□□□ 0.6
CLCN6-204ENST00000376491 CAVIN4Q5BKX8 364 aa18.77■□□□□ 0.6
CLCN6-204ENST00000376491 CNKSR2Q8WXI2 1034 aa18.77■□□□□ 0.6
CLCN6-204ENST00000376491 CACNB3P54284 484 aa18.76■□□□□ 0.59
CLCN6-204ENST00000376491 HDLBPQ00341 1268 aaKnown RBP18.76■□□□□ 0.59
CLCN6-204ENST00000376491 CRHR2Q13324 411 aa18.76■□□□□ 0.59
CLCN6-204ENST00000376491 TBC1D22AQ8WUA7 517 aa18.76■□□□□ 0.59
CLCN6-204ENST00000376491 OPTNQ96CV9 577 aa18.76■□□□□ 0.59
CLCN6-204ENST00000376491 CDCA7LQ96GN5 454 aa18.76■□□□□ 0.59
CLCN6-204ENST00000376491 MS4A4AQ96JQ5 239 aa18.76■□□□□ 0.59
CLCN6-204ENST00000376491 TRIM17Q9Y577 477 aa18.76■□□□□ 0.59
CLCN6-204ENST00000376491 MYH13Q9UKX3 1938 aa18.76■□□□□ 0.59
CLCN6-204ENST00000376491 FRAT2O75474 233 aaPredicted RBP18.75■□□□□ 0.59
CLCN6-204ENST00000376491 OTOP1Q7RTM1 612 aa18.75■□□□□ 0.59
CLCN6-204ENST00000376491 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.75■□□□□ 0.59
CLCN6-204ENST00000376491 TNNI2P48788 182 aa18.74■□□□□ 0.59
CLCN6-204ENST00000376491 MAP3K9P80192 1104 aa18.74■□□□□ 0.59
CLCN6-204ENST00000376491 CAP1Q01518 475 aa18.74■□□□□ 0.59
CLCN6-204ENST00000376491 VGLL4Q14135 290 aa18.74■□□□□ 0.59
CLCN6-204ENST00000376491 TEKT1Q969V4 418 aa18.74■□□□□ 0.59
CLCN6-204ENST00000376491 MRIQ9BWK5 157 aa18.74■□□□□ 0.59
CLCN6-204ENST00000376491 EYA2O00167 538 aa18.73■□□□□ 0.59
CLCN6-204ENST00000376491 IFIT1P09914 478 aaKnown RBP18.73■□□□□ 0.59
CLCN6-204ENST00000376491 PUM3Q15397 648 aaKnown RBP18.73■□□□□ 0.59
CLCN6-204ENST00000376491 ALDH1L2Q3SY69 923 aa18.73■□□□□ 0.59
CLCN6-204ENST00000376491 OTUD7BQ6GQQ9 843 aa18.73■□□□□ 0.59
CLCN6-204ENST00000376491 APOBEC3HQ6NTF7 200 aaKnown RBP18.73■□□□□ 0.59
CLCN6-204ENST00000376491 CD99L2Q8TCZ2 262 aa18.73■□□□□ 0.59
CLCN6-204ENST00000376491 BRI3BPQ8WY22 251 aa18.73■□□□□ 0.59
CLCN6-204ENST00000376491 ZDHHC15Q96MV8 337 aa18.73■□□□□ 0.59
CLCN6-204ENST00000376491 KIF16BQ96L93 1317 aa18.73■□□□□ 0.59
CLCN6-204ENST00000376491 ATG9AQ7Z3C6 839 aa18.72■□□□□ 0.59
CLCN6-204ENST00000376491 ERO1AQ96HE7 468 aa18.72■□□□□ 0.59
CLCN6-204ENST00000376491 HTTP42858 3142 aa18.72■□□□□ 0.59
CLCN6-204ENST00000376491 TRMT2AQ8IZ69 625 aaKnown RBP18.71■□□□□ 0.59
CLCN6-204ENST00000376491 SMC4Q9NTJ3 1288 aa18.71■□□□□ 0.59
CLCN6-204ENST00000376491 PTPN22Q9Y2R2 807 aa18.71■□□□□ 0.59
CLCN6-204ENST00000376491 SUGT1Q9Y2Z0 365 aa18.71■□□□□ 0.59
CLCN6-204ENST00000376491 KIAA0100Q14667 2235 aaKnown RBP18.71■□□□□ 0.59
CLCN6-204ENST00000376491 CCL15-CCL14A0A0B4J2E2 113 aa18.7■□□□□ 0.58
CLCN6-204ENST00000376491 SP3Q02447 781 aa18.7■□□□□ 0.58
CLCN6-204ENST00000376491 CCL15Q16663 113 aa18.7■□□□□ 0.58
CLCN6-204ENST00000376491 HHIPL2Q6UWX4 724 aa18.7■□□□□ 0.58
CLCN6-204ENST00000376491 FAM83AQ86UY5 434 aa18.7■□□□□ 0.58
CLCN6-204ENST00000376491 LPIN2Q92539 896 aa18.7■□□□□ 0.58
CLCN6-204ENST00000376491 OTUD5Q96G74 571 aa18.7■□□□□ 0.58
CLCN6-204ENST00000376491 CSADQ9Y600 493 aa18.7■□□□□ 0.58
CLCN6-204ENST00000376491 SNCAIPQ9Y6H5 919 aa18.7■□□□□ 0.58
CLCN6-204ENST00000376491 SPDYE5A6NIY4 337 aa18.69■□□□□ 0.58
CLCN6-204ENST00000376491 SLC5A1P13866 664 aa18.69■□□□□ 0.58
CLCN6-204ENST00000376491 GTF2A2P52657 109 aa18.69■□□□□ 0.58
CLCN6-204ENST00000376491 FKBP1CQ5VVH2 108 aa18.69■□□□□ 0.58
CLCN6-204ENST00000376491 FAM43AQ8N2R8 423 aa18.69■□□□□ 0.58
CLCN6-204ENST00000376491 MAST3O60307 1309 aa18.69■□□□□ 0.58
CLCN6-204ENST00000376491 POTEFA5A3E0 1075 aa18.68■□□□□ 0.58
CLCN6-204ENST00000376491 TAF1CQ15572 869 aaPredicted RBP18.68■□□□□ 0.58
CLCN6-204ENST00000376491 PRPF38BQ5VTL8 546 aaKnown RBP18.68■□□□□ 0.58
CLCN6-204ENST00000376491 EFCC1Q9HA90 598 aa18.68■□□□□ 0.58
CLCN6-204ENST00000376491 TMOD2Q9NZR1 351 aa18.68■□□□□ 0.58
CLCN6-204ENST00000376491 AK9Q5TCS8 1911 aa18.67■□□□□ 0.58
CLCN6-204ENST00000376491 WDR66Q8TBY9 1149 aa18.67■□□□□ 0.58
CLCN6-204ENST00000376491 ZKSCAN4Q969J2 545 aaPredicted RBP18.67■□□□□ 0.58
CLCN6-204ENST00000376491 WRNIP1Q96S55 665 aa18.67■□□□□ 0.58
CLCN6-204ENST00000376491 SIL1Q9H173 461 aa18.67■□□□□ 0.58
CLCN6-204ENST00000376491 NOB1Q9ULX3 412 aaKnown RBP18.67■□□□□ 0.58
CLCN6-204ENST00000376491 RPAP1Q9BWH6 1393 aaPredicted RBP18.67■□□□□ 0.58
CLCN6-204ENST00000376491 RBBP6Q7Z6E9 1792 aaKnown RBP18.66■□□□□ 0.58
CLCN6-204ENST00000376491 CIAO1O76071 339 aa18.66■□□□□ 0.58
CLCN6-204ENST00000376491 UBTFL1P0CB47 393 aaPredicted RBP18.66■□□□□ 0.58
CLCN6-204ENST00000376491 PRDX5P30044 214 aa18.66■□□□□ 0.58
CLCN6-204ENST00000376491 DIXDC1Q155Q3 683 aa18.66■□□□□ 0.58
CLCN6-204ENST00000376491 MIGA2Q7L4E1 593 aa18.66■□□□□ 0.58
CLCN6-204ENST00000376491 ERO1BQ86YB8 467 aa18.66■□□□□ 0.58
CLCN6-204ENST00000376491 ZFYVE28Q9HCC9 887 aa18.66■□□□□ 0.58
CLCN6-204ENST00000376491 FBXO3Q9UK99 471 aa18.66■□□□□ 0.58
CLCN6-204ENST00000376491 DAGLAQ9Y4D2 1042 aa18.66■□□□□ 0.58
CLCN6-204ENST00000376491 CENPFP49454 3210 aa18.66■□□□□ 0.58
CLCN6-204ENST00000376491 ZSWIM8A7E2V4 1837 aa18.65■□□□□ 0.58
CLCN6-204ENST00000376491 IRF6O14896 467 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms