RNA–Protein interactions for RNA: ENST00000376392.10

NME1-NME2-201, Transcript of NME1-NME2 readthrough, humanhuman

TSL 5 BASIC

Gene NME1-NME2, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-NME2-201ENST00000376392 BRF1Q92994 677 aa15.39■□□□□ 0.05
NME1-NME2-201ENST00000376392 GTF3C6Q969F1 213 aa15.39■□□□□ 0.05
NME1-NME2-201ENST00000376392 NAPBQ9H115 298 aa15.39■□□□□ 0.05
NME1-NME2-201ENST00000376392 ABCF2Q9UG63 623 aa15.39■□□□□ 0.05
NME1-NME2-201ENST00000376392 CACNA1SQ13698 1873 aa15.38■□□□□ 0.05
NME1-NME2-201ENST00000376392 POLRMTO00411 1230 aaKnown RBP15.38■□□□□ 0.05
NME1-NME2-201ENST00000376392 FOXP2O15409 715 aa15.38■□□□□ 0.05
NME1-NME2-201ENST00000376392 ZSCAN22P10073 491 aaPredicted RBP15.38■□□□□ 0.05
NME1-NME2-201ENST00000376392 HAND2P61296 217 aa15.38■□□□□ 0.05
NME1-NME2-201ENST00000376392 SPTY2D1Q68D10 685 aaPredicted RBP15.38■□□□□ 0.05
NME1-NME2-201ENST00000376392 ZNF804AQ7Z570 1209 aa15.38■□□□□ 0.05
NME1-NME2-201ENST00000376392 PROM2Q8N271 834 aa15.38■□□□□ 0.05
NME1-NME2-201ENST00000376392 AKT1S1Q96B36 256 aa15.38■□□□□ 0.05
NME1-NME2-201ENST00000376392 LLPHQ9BRT6 129 aaKnown RBP15.38■□□□□ 0.05
NME1-NME2-201ENST00000376392 AGXT2Q9BYV1 514 aa15.38■□□□□ 0.05
NME1-NME2-201ENST00000376392 IQSEC3Q9UPP2 1182 aaPredicted RBP15.38■□□□□ 0.05
NME1-NME2-201ENST00000376392 COL1A1P02452 1464 aaPredicted RBP15.38■□□□□ 0.05
NME1-NME2-201ENST00000376392 ANKRD31Q8N7Z5 1873 aa15.37■□□□□ 0.05
NME1-NME2-201ENST00000376392 QSER1Q2KHR3 1735 aa15.37■□□□□ 0.05
NME1-NME2-201ENST00000376392 MAGEB6P1A0A0J9YX57 407 aa15.37■□□□□ 0.05
NME1-NME2-201ENST00000376392 PFKFB2O60825 505 aa15.37■□□□□ 0.05
NME1-NME2-201ENST00000376392 BBOX1O75936 387 aa15.37■□□□□ 0.05
NME1-NME2-201ENST00000376392 SYT1P21579 422 aa15.37■□□□□ 0.05
NME1-NME2-201ENST00000376392 ATP2B4P23634 1241 aa15.37■□□□□ 0.05
NME1-NME2-201ENST00000376392 STK3Q13188 491 aa15.37■□□□□ 0.05
NME1-NME2-201ENST00000376392 FOXD4L5Q5VV16 416 aaPredicted RBP15.37■□□□□ 0.05
NME1-NME2-201ENST00000376392 FOXD4L4Q8WXT5 416 aaPredicted RBP15.37■□□□□ 0.05
NME1-NME2-201ENST00000376392 ZNF274Q96GC6 653 aaPredicted RBP15.37■□□□□ 0.05
NME1-NME2-201ENST00000376392 CRAMP1Q96RY5 1269 aa15.37■□□□□ 0.05
NME1-NME2-201ENST00000376392 ARMT1Q9H993 441 aa15.37■□□□□ 0.05
NME1-NME2-201ENST00000376392 SLC4A4Q9Y6R1 1079 aa15.37■□□□□ 0.05
NME1-NME2-201ENST00000376392 PRC1O43663 620 aa15.36■□□□□ 0.05
NME1-NME2-201ENST00000376392 HOXA10P31260 410 aaPredicted RBP15.36■□□□□ 0.05
NME1-NME2-201ENST00000376392 TDO2P48775 406 aa15.36■□□□□ 0.05
NME1-NME2-201ENST00000376392 HMGN5P82970 282 aaKnown RBP15.36■□□□□ 0.05
NME1-NME2-201ENST00000376392 DDR1Q08345 913 aa15.36■□□□□ 0.05
NME1-NME2-201ENST00000376392 ST3GAL1Q11201 340 aa15.36■□□□□ 0.05
NME1-NME2-201ENST00000376392 ZNF827Q17R98 1081 aa15.36■□□□□ 0.05
NME1-NME2-201ENST00000376392 CSPP1Q1MSJ5 1256 aa15.36■□□□□ 0.05
NME1-NME2-201ENST00000376392 LARP1BQ659C4 914 aaKnown RBP15.36■□□□□ 0.05
NME1-NME2-201ENST00000376392 NAA16Q6N069 864 aaPredicted RBP15.36■□□□□ 0.05
NME1-NME2-201ENST00000376392 C15orf52Q6ZUT6 534 aaKnown RBP15.36■□□□□ 0.05
NME1-NME2-201ENST00000376392 MB21D2Q8IYB1 491 aaPredicted RBP15.36■□□□□ 0.05
NME1-NME2-201ENST00000376392 IFNL3Q8IZI9 196 aa15.36■□□□□ 0.05
NME1-NME2-201ENST00000376392 CNNM2Q9H8M5 875 aa15.36■□□□□ 0.05
NME1-NME2-201ENST00000376392 LAMB1P07942 1786 aa15.35■□□□□ 0.05
NME1-NME2-201ENST00000376392 F13A1P00488 732 aa15.35■□□□□ 0.05
NME1-NME2-201ENST00000376392 NCLP19338 710 aaKnown RBP15.35■□□□□ 0.05
NME1-NME2-201ENST00000376392 KLHL40Q2TBA0 621 aa15.35■□□□□ 0.05
NME1-NME2-201ENST00000376392 LCORLQ8N3X6 602 aa15.35■□□□□ 0.05
NME1-NME2-201ENST00000376392 WDR66Q8TBY9 1149 aa15.35■□□□□ 0.05
NME1-NME2-201ENST00000376392 LRRC2Q9BYS8 371 aa15.35■□□□□ 0.05
NME1-NME2-201ENST00000376392 RNF41Q9H4P4 317 aaPredicted RBP15.35■□□□□ 0.05
NME1-NME2-201ENST00000376392 DDX49Q9Y6V7 483 aaKnown RBP15.35■□□□□ 0.05
NME1-NME2-201ENST00000376392 A0A0G2JLW4 131 aa15.34■□□□□ 0.05
NME1-NME2-201ENST00000376392 VPS37CA5D8V6 355 aaPredicted RBP15.34■□□□□ 0.05
NME1-NME2-201ENST00000376392 DHX16O60231 1041 aaKnown RBP15.34■□□□□ 0.05
NME1-NME2-201ENST00000376392 MBD3O95983 291 aa15.34■□□□□ 0.05
NME1-NME2-201ENST00000376392 APOBRQ0VD83 1088 aa15.34■□□□□ 0.05
NME1-NME2-201ENST00000376392 CHAF1AQ13111 956 aaPredicted RBP15.34■□□□□ 0.05
NME1-NME2-201ENST00000376392 COL23A1Q86Y22 540 aaPredicted RBP15.34■□□□□ 0.05
NME1-NME2-201ENST00000376392 FAM184AQ8NB25 1140 aa15.34■□□□□ 0.05
NME1-NME2-201ENST00000376392 BRIP1Q9BX63 1249 aa15.34■□□□□ 0.05
NME1-NME2-201ENST00000376392 KRT23Q9C075 422 aa15.34■□□□□ 0.05
NME1-NME2-201ENST00000376392 GGA1Q9UJY5 639 aa15.34■□□□□ 0.05
NME1-NME2-201ENST00000376392 NAP1L2Q9ULW6 460 aaPredicted RBP15.34■□□□□ 0.05
NME1-NME2-201ENST00000376392 PARP3Q9Y6F1 533 aa15.34■□□□□ 0.05
NME1-NME2-201ENST00000376392 KLRG2A4D1S0 409 aaPredicted RBP15.33■□□□□ 0.04
NME1-NME2-201ENST00000376392 GSG1L2A8MUP6 293 aa15.33■□□□□ 0.04
NME1-NME2-201ENST00000376392 KLRK1P26718 216 aa15.33■□□□□ 0.04
NME1-NME2-201ENST00000376392 PDE6BP35913 854 aa15.33■□□□□ 0.04
NME1-NME2-201ENST00000376392 EVCP57679 992 aa15.33■□□□□ 0.04
NME1-NME2-201ENST00000376392 COL9A3Q14050 684 aaPredicted RBP15.33■□□□□ 0.04
NME1-NME2-201ENST00000376392 MIGA1Q8NAN2 632 aa15.33■□□□□ 0.04
NME1-NME2-201ENST00000376392 TMEM87BQ96K49 555 aa15.33■□□□□ 0.04
NME1-NME2-201ENST00000376392 EPB41L4AQ9HCS5 686 aaPredicted RBP15.33■□□□□ 0.04
NME1-NME2-201ENST00000376392 LMBRD1Q9NUN5 540 aa15.33■□□□□ 0.04
NME1-NME2-201ENST00000376392 SALL1Q9NSC2 1324 aa15.33■□□□□ 0.04
NME1-NME2-201ENST00000376392 IRS2Q9Y4H2 1338 aa15.33■□□□□ 0.04
NME1-NME2-201ENST00000376392 PRPF40AO75400 957 aaKnown RBP15.32■□□□□ 0.04
NME1-NME2-201ENST00000376392 UFL1O94874 794 aa15.32■□□□□ 0.04
NME1-NME2-201ENST00000376392 GSTO1P78417 241 aa15.32■□□□□ 0.04
NME1-NME2-201ENST00000376392 GPSM2P81274 684 aa15.32■□□□□ 0.04
NME1-NME2-201ENST00000376392 SCRN1Q12765 414 aa15.32■□□□□ 0.04
NME1-NME2-201ENST00000376392 L1TD1Q5T7N2 865 aaKnown RBP15.32■□□□□ 0.04
NME1-NME2-201ENST00000376392 GIMAP6Q6P9H5 292 aa15.32■□□□□ 0.04
NME1-NME2-201ENST00000376392 DZIP1Q86YF9 867 aaKnown RBP15.32■□□□□ 0.04
NME1-NME2-201ENST00000376392 TBC1D10CQ8IV04 446 aa15.32■□□□□ 0.04
NME1-NME2-201ENST00000376392 UPF1Q92900 1129 aaKnown RBP eCLIP15.32■□□□□ 0.04
NME1-NME2-201ENST00000376392 TMX4Q9H1E5 349 aaPredicted RBP15.32■□□□□ 0.04
NME1-NME2-201ENST00000376392 ISY1Q9ULR0 285 aaKnown RBP15.32■□□□□ 0.04
NME1-NME2-201ENST00000376392 MTMR6Q9Y217 621 aa15.32■□□□□ 0.04
NME1-NME2-201ENST00000376392 LTBP1Q14766 1721 aa15.31■□□□□ 0.04
NME1-NME2-201ENST00000376392 MYH15Q9Y2K3 1946 aa15.31■□□□□ 0.04
NME1-NME2-201ENST00000376392 PPEF1O14829 653 aaPredicted RBP15.31■□□□□ 0.04
NME1-NME2-201ENST00000376392 NPR1P16066 1061 aa15.31■□□□□ 0.04
NME1-NME2-201ENST00000376392 PDIA3P30101 505 aaKnown RBP15.31■□□□□ 0.04
NME1-NME2-201ENST00000376392 SART3Q15020 963 aaKnown RBP15.31■□□□□ 0.04
NME1-NME2-201ENST00000376392 AKNAD1Q5T1N1 836 aa15.31■□□□□ 0.04
NME1-NME2-201ENST00000376392 MFSD6Q6ZSS7 791 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms