RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 LAMA4Q16363 1823 aa12.6□□□□□ -0.39
PDPN-203ENST00000376061 CCDC171Q6TFL3 1326 aa12.6□□□□□ -0.39
PDPN-203ENST00000376061 GOLGB1Q14789 3259 aaKnown RBP12.6□□□□□ -0.39
PDPN-203ENST00000376061 TCRBV5S4A2TA0A5A2 114 aa12.59□□□□□ -0.39
PDPN-203ENST00000376061 MAP3K12Q12852 859 aa12.59□□□□□ -0.39
PDPN-203ENST00000376061 MCMDC2Q4G0Z9 681 aa12.59□□□□□ -0.39
PDPN-203ENST00000376061 SLC9C2Q5TAH2 1124 aa12.59□□□□□ -0.39
PDPN-203ENST00000376061 CCDC129Q6ZRS4 1044 aa12.59□□□□□ -0.39
PDPN-203ENST00000376061 COA1Q9GZY4 146 aa12.59□□□□□ -0.39
PDPN-203ENST00000376061 JAG2Q9Y219 1238 aa12.59□□□□□ -0.39
PDPN-203ENST00000376061 SALL1Q9NSC2 1324 aa12.59□□□□□ -0.39
PDPN-203ENST00000376061 COL4A5P29400 1685 aa12.59□□□□□ -0.39
PDPN-203ENST00000376061 M0R2C6 588 aa12.58□□□□□ -0.4
PDPN-203ENST00000376061 EPB41L2O43491 1005 aaKnown RBP12.58□□□□□ -0.4
PDPN-203ENST00000376061 PTH1RQ03431 593 aa12.58□□□□□ -0.4
PDPN-203ENST00000376061 UBE3CQ15386 1083 aa12.58□□□□□ -0.4
PDPN-203ENST00000376061 GRIPAP1Q4V328 841 aa12.58□□□□□ -0.4
PDPN-203ENST00000376061 DALRD3Q5D0E6 543 aaKnown RBP12.58□□□□□ -0.4
PDPN-203ENST00000376061 KIAA1211Q6ZU35 1233 aa12.58□□□□□ -0.4
PDPN-203ENST00000376061 MAGEB6Q8N7X4 407 aa12.58□□□□□ -0.4
PDPN-203ENST00000376061 NLGN2Q8NFZ4 835 aa12.58□□□□□ -0.4
PDPN-203ENST00000376061 OSBP2Q969R2 916 aa12.58□□□□□ -0.4
PDPN-203ENST00000376061 ZC3H12CQ9C0D7 883 aaKnown RBP12.58□□□□□ -0.4
PDPN-203ENST00000376061 LRP2BPQ9P2M1 347 aa12.58□□□□□ -0.4
PDPN-203ENST00000376061 ABCF2Q9UG63 623 aa12.58□□□□□ -0.4
PDPN-203ENST00000376061 ZNF532Q9HCE3 1301 aa12.58□□□□□ -0.4
PDPN-203ENST00000376061 MYH2Q9UKX2 1941 aa12.58□□□□□ -0.4
PDPN-203ENST00000376061 SOGA3Q5TF21 947 aa12.57□□□□□ -0.4
PDPN-203ENST00000376061 RTKN2Q8IZC4 609 aa12.57□□□□□ -0.4
PDPN-203ENST00000376061 SUPT20HQ8NEM7 779 aa12.57□□□□□ -0.4
PDPN-203ENST00000376061 WDR66Q8TBY9 1149 aa12.57□□□□□ -0.4
PDPN-203ENST00000376061 PSMD1Q99460 953 aa12.57□□□□□ -0.4
PDPN-203ENST00000376061 RAI14Q9P0K7 980 aa12.57□□□□□ -0.4
PDPN-203ENST00000376061 FAM205AQ6ZU69 1335 aa12.57□□□□□ -0.4
PDPN-203ENST00000376061 ADAMTSL1Q8N6G6 1762 aa12.57□□□□□ -0.4
PDPN-203ENST00000376061 PRDX5P30044 214 aa12.56□□□□□ -0.4
PDPN-203ENST00000376061 ANP32AP39687 249 aaKnown RBP12.56□□□□□ -0.4
PDPN-203ENST00000376061 KIAA2012Q0VF49 1180 aa12.56□□□□□ -0.4
PDPN-203ENST00000376061 AOC3Q16853 763 aa12.56□□□□□ -0.4
PDPN-203ENST00000376061 DOK7Q18PE1 504 aa12.56□□□□□ -0.4
PDPN-203ENST00000376061 ZGPATQ8N5A5 531 aaKnown RBP12.56□□□□□ -0.4
PDPN-203ENST00000376061 ZNF384Q8TF68 577 aa12.56□□□□□ -0.4
PDPN-203ENST00000376061 PUS7LQ9H0K6 701 aaKnown RBP12.56□□□□□ -0.4
PDPN-203ENST00000376061 GPAA1O43292 621 aa12.56□□□□□ -0.4
PDPN-203ENST00000376061 ERICH6Q7L0X2 663 aa12.56□□□□□ -0.4
PDPN-203ENST00000376061 KIF2CQ99661 725 aa12.56□□□□□ -0.4
PDPN-203ENST00000376061 DBNDD1Q9H9R9 158 aa12.56□□□□□ -0.4
PDPN-203ENST00000376061 PALD1Q9ULE6 856 aa12.56□□□□□ -0.4
PDPN-203ENST00000376061 RBM8AQ9Y5S9 174 aaKnown RBP12.56□□□□□ -0.4
PDPN-203ENST00000376061 CDK5RAP2Q96SN8 1893 aa12.55□□□□□ -0.4
PDPN-203ENST00000376061 FOXP2O15409 715 aa12.55□□□□□ -0.4
PDPN-203ENST00000376061 PPIP5K2O43314 1243 aa12.55□□□□□ -0.4
PDPN-203ENST00000376061 ECE2O60344 883 aa12.55□□□□□ -0.4
PDPN-203ENST00000376061 MBD4O95243 580 aa12.55□□□□□ -0.4
PDPN-203ENST00000376061 CYP7A1P22680 504 aa12.55□□□□□ -0.4
PDPN-203ENST00000376061 MCCP23508 829 aa12.55□□□□□ -0.4
PDPN-203ENST00000376061 HSPA4P34932 840 aa12.55□□□□□ -0.4
PDPN-203ENST00000376061 MECOMQ03112 1051 aa12.55□□□□□ -0.4
PDPN-203ENST00000376061 GRIK5Q16478 980 aa12.55□□□□□ -0.4
PDPN-203ENST00000376061 VPS53Q5VIR6 699 aa12.55□□□□□ -0.4
PDPN-203ENST00000376061 SPTY2D1Q68D10 685 aaPredicted RBP12.55□□□□□ -0.4
PDPN-203ENST00000376061 NAA16Q6N069 864 aaPredicted RBP12.55□□□□□ -0.4
PDPN-203ENST00000376061 ADGRA1Q86SQ6 560 aa12.55□□□□□ -0.4
PDPN-203ENST00000376061 MAP4K1Q92918 833 aa12.55□□□□□ -0.4
PDPN-203ENST00000376061 NSUN4Q96CB9 384 aaKnown RBP12.55□□□□□ -0.4
PDPN-203ENST00000376061 FARP1Q9Y4F1 1045 aaPredicted RBP12.55□□□□□ -0.4
PDPN-203ENST00000376061 LAMB1P07942 1786 aa12.54□□□□□ -0.4
PDPN-203ENST00000376061 G3V3G9 751 aa12.54□□□□□ -0.4
PDPN-203ENST00000376061 IGSF3O75054 1194 aa12.54□□□□□ -0.4
PDPN-203ENST00000376061 LDHBP07195 334 aaKnown RBP12.54□□□□□ -0.4
PDPN-203ENST00000376061 CLCN6P51797 869 aa12.54□□□□□ -0.4
PDPN-203ENST00000376061 GTF2IP78347 998 aa12.54□□□□□ -0.4
PDPN-203ENST00000376061 MFSD14BQ5SR56 506 aa12.54□□□□□ -0.4
PDPN-203ENST00000376061 DCAF8Q5TAQ9 597 aa12.54□□□□□ -0.4
PDPN-203ENST00000376061 DZIP1Q86YF9 867 aaKnown RBP12.54□□□□□ -0.4
PDPN-203ENST00000376061 TBC1D22AQ8WUA7 517 aa12.54□□□□□ -0.4
PDPN-203ENST00000376061 IL17RAQ96F46 866 aa12.54□□□□□ -0.4
PDPN-203ENST00000376061 DSCC1Q9BVC3 393 aa12.54□□□□□ -0.4
PDPN-203ENST00000376061 FHDC1Q9C0D6 1143 aaPredicted RBP12.54□□□□□ -0.4
PDPN-203ENST00000376061 ZNF277Q9NRM2 450 aaPredicted RBP12.54□□□□□ -0.4
PDPN-203ENST00000376061 BCS1LQ9Y276 419 aa12.54□□□□□ -0.4
PDPN-203ENST00000376061 FOCADQ5VW36 1801 aa12.54□□□□□ -0.4
PDPN-203ENST00000376061 NAV1Q8NEY1 1877 aa12.54□□□□□ -0.4
PDPN-203ENST00000376061 DDX60LQ5H9U9 1706 aaKnown RBP12.53□□□□□ -0.4
PDPN-203ENST00000376061 TIAM2Q8IVF5 1701 aa12.53□□□□□ -0.4
PDPN-203ENST00000376061 NFKBIEO00221 500 aa12.53□□□□□ -0.4
PDPN-203ENST00000376061 HSPD1P10809 573 aaKnown RBP12.53□□□□□ -0.4
PDPN-203ENST00000376061 ANAPC15P60006 121 aa12.53□□□□□ -0.4
PDPN-203ENST00000376061 NECTIN1Q15223 517 aa12.53□□□□□ -0.4
PDPN-203ENST00000376061 TMED8Q6PL24 325 aaPredicted RBP12.53□□□□□ -0.4
PDPN-203ENST00000376061 PODNQ7Z5L7 613 aa12.53□□□□□ -0.4
PDPN-203ENST00000376061 CERS5Q8N5B7 392 aa12.53□□□□□ -0.4
PDPN-203ENST00000376061 MIGA1Q8NAN2 632 aa12.53□□□□□ -0.4
PDPN-203ENST00000376061 AIDAQ96BJ3 306 aa12.53□□□□□ -0.4
PDPN-203ENST00000376061 BAZ2AQ9UIF9 1905 aaKnown RBP12.52□□□□□ -0.4
PDPN-203ENST00000376061 ECM29Q5VYK3 1845 aa12.52□□□□□ -0.4
PDPN-203ENST00000376061 LTBP3Q9NS15 1303 aa12.52□□□□□ -0.41
PDPN-203ENST00000376061 LCORLQ8N3X6 602 aa12.52□□□□□ -0.41
PDPN-203ENST00000376061 KCNB2Q92953 911 aa12.52□□□□□ -0.41
PDPN-203ENST00000376061 FBXW7Q969H0 707 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms