RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 CC2D2BQ6DHV5 1058 aa13.23□□□□□ -0.29
PDPN-202ENST00000376057 SUGT1Q9Y2Z0 365 aa13.23□□□□□ -0.29
PDPN-202ENST00000376057 SNED1Q8TER0 1413 aa13.23□□□□□ -0.29
PDPN-202ENST00000376057 H0YIN7 160 aa13.22□□□□□ -0.29
PDPN-202ENST00000376057 DHX32Q7L7V1 743 aaKnown RBP13.22□□□□□ -0.29
PDPN-202ENST00000376057 TXNRD3Q86VQ6 643 aa13.22□□□□□ -0.29
PDPN-202ENST00000376057 CNKSR1Q969H4 720 aa13.22□□□□□ -0.29
PDPN-202ENST00000376057 NSUN4Q96CB9 384 aaKnown RBP13.22□□□□□ -0.29
PDPN-202ENST00000376057 RTFDC1Q9BY42 306 aaPredicted RBP13.22□□□□□ -0.29
PDPN-202ENST00000376057 E7EWF7 191 aa13.22□□□□□ -0.29
PDPN-202ENST00000376057 EVCP57679 992 aa13.22□□□□□ -0.29
PDPN-202ENST00000376057 NUCB2P80303 420 aa13.22□□□□□ -0.29
PDPN-202ENST00000376057 RAB3GAP1Q15042 981 aa13.22□□□□□ -0.29
PDPN-202ENST00000376057 MTA3Q9BTC8 594 aa13.22□□□□□ -0.29
PDPN-202ENST00000376057 POLLQ9UGP5 575 aa13.22□□□□□ -0.29
PDPN-202ENST00000376057 UFL1O94874 794 aa13.21□□□□□ -0.29
PDPN-202ENST00000376057 HSP90AA1P07900 732 aaKnown RBP13.21□□□□□ -0.29
PDPN-202ENST00000376057 CHMP4CQ96CF2 233 aa13.21□□□□□ -0.29
PDPN-202ENST00000376057 RIOK1Q9BRS2 568 aaKnown RBP13.21□□□□□ -0.29
PDPN-202ENST00000376057 COA1Q9GZY4 146 aa13.21□□□□□ -0.29
PDPN-202ENST00000376057 CD209Q9NNX6 404 aa13.21□□□□□ -0.29
PDPN-202ENST00000376057 GSTO1P78417 241 aa13.21□□□□□ -0.29
PDPN-202ENST00000376057 STOX1Q6ZVD7 989 aa13.21□□□□□ -0.29
PDPN-202ENST00000376057 TBC1D22AQ8WUA7 517 aa13.21□□□□□ -0.29
PDPN-202ENST00000376057 ANP32EQ9BTT0 268 aa13.21□□□□□ -0.29
PDPN-202ENST00000376057 SLKQ9H2G2 1235 aaPredicted RBP13.21□□□□□ -0.29
PDPN-202ENST00000376057 ANAPC4Q9UJX5 808 aa13.21□□□□□ -0.29
PDPN-202ENST00000376057 NSFL1CQ9UNZ2 370 aaKnown RBP13.21□□□□□ -0.29
PDPN-202ENST00000376057 GSG1L2A8MUP6 293 aa13.21□□□□□ -0.3
PDPN-202ENST00000376057 ZNF213O14771 459 aa13.21□□□□□ -0.3
PDPN-202ENST00000376057 C2CD5Q86YS7 1000 aa13.21□□□□□ -0.3
PDPN-202ENST00000376057 NACAP1Q9BZK3 213 aa13.21□□□□□ -0.3
PDPN-202ENST00000376057 TAF6LQ9Y6J9 622 aa13.21□□□□□ -0.3
PDPN-202ENST00000376057 CHD4Q14839 1912 aa13.2□□□□□ -0.3
PDPN-202ENST00000376057 MBD4O95243 580 aa13.2□□□□□ -0.3
PDPN-202ENST00000376057 PCP11498 1178 aaKnown RBP13.2□□□□□ -0.3
PDPN-202ENST00000376057 CYP7A1P22680 504 aa13.2□□□□□ -0.3
PDPN-202ENST00000376057 TOB2Q14106 344 aaPredicted RBP13.2□□□□□ -0.3
PDPN-202ENST00000376057 NAA16Q6N069 864 aaPredicted RBP13.2□□□□□ -0.3
PDPN-202ENST00000376057 IFNL3Q8IZI9 196 aa13.2□□□□□ -0.3
PDPN-202ENST00000376057 ZNF384Q8TF68 577 aa13.2□□□□□ -0.3
PDPN-202ENST00000376057 C7orf43Q8WVR3 580 aa13.2□□□□□ -0.3
PDPN-202ENST00000376057 FAM163AQ96GL9 167 aaPredicted RBP13.2□□□□□ -0.3
PDPN-202ENST00000376057 TMX4Q9H1E5 349 aaPredicted RBP13.2□□□□□ -0.3
PDPN-202ENST00000376057 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.2□□□□□ -0.3
PDPN-202ENST00000376057 MAGEB6P1A0A0J9YX57 407 aa13.2□□□□□ -0.3
PDPN-202ENST00000376057 FKBP1AP62942 108 aaKnown RBP13.2□□□□□ -0.3
PDPN-202ENST00000376057 MPNDQ8N594 471 aa13.2□□□□□ -0.3
PDPN-202ENST00000376057 EYA3Q99504 573 aa13.2□□□□□ -0.3
PDPN-202ENST00000376057 RAI14Q9P0K7 980 aa13.2□□□□□ -0.3
PDPN-202ENST00000376057 ZNF646O15015 1829 aaPredicted RBP13.2□□□□□ -0.3
PDPN-202ENST00000376057 PPP4CP60510 307 aa13.19□□□□□ -0.3
PDPN-202ENST00000376057 MECOMQ03112 1051 aa13.19□□□□□ -0.3
PDPN-202ENST00000376057 LAMB1P07942 1786 aa13.19□□□□□ -0.3
PDPN-202ENST00000376057 DEFB132Q7Z7B7 95 aa13.19□□□□□ -0.3
PDPN-202ENST00000376057 MB21D2Q8IYB1 491 aaPredicted RBP13.19□□□□□ -0.3
PDPN-202ENST00000376057 SLX4Q8IY92 1834 aa13.19□□□□□ -0.3
PDPN-202ENST00000376057 FRAT2O75474 233 aaPredicted RBP13.18□□□□□ -0.3
PDPN-202ENST00000376057 MSL1Q68DK7 614 aa13.18□□□□□ -0.3
PDPN-202ENST00000376057 LCORLQ8N3X6 602 aa13.18□□□□□ -0.3
PDPN-202ENST00000376057 NCOA7Q8NI08 942 aa13.18□□□□□ -0.3
PDPN-202ENST00000376057 VPS33BQ9H267 617 aa13.18□□□□□ -0.3
PDPN-202ENST00000376057 ABCF2Q9UG63 623 aa13.18□□□□□ -0.3
PDPN-202ENST00000376057 LDHCP07864 332 aa13.18□□□□□ -0.3
PDPN-202ENST00000376057 FGRP09769 529 aa13.18□□□□□ -0.3
PDPN-202ENST00000376057 ADGRA1Q86SQ6 560 aa13.18□□□□□ -0.3
PDPN-202ENST00000376057 RGS22Q8NE09 1264 aa13.18□□□□□ -0.3
PDPN-202ENST00000376057 NBPF3Q9H094 633 aa13.18□□□□□ -0.3
PDPN-202ENST00000376057 CNNM2Q9H8M5 875 aa13.18□□□□□ -0.3
PDPN-202ENST00000376057 EPB41L4AQ9HCS5 686 aaPredicted RBP13.18□□□□□ -0.3
PDPN-202ENST00000376057 LDHBP07195 334 aaKnown RBP13.17□□□□□ -0.3
PDPN-202ENST00000376057 SLF2Q8IX21 1173 aa13.17□□□□□ -0.3
PDPN-202ENST00000376057 STAG1Q8WVM7 1258 aa13.17□□□□□ -0.3
PDPN-202ENST00000376057 ZNF274Q96GC6 653 aaPredicted RBP13.17□□□□□ -0.3
PDPN-202ENST00000376057 ARMT1Q9H993 441 aa13.17□□□□□ -0.3
PDPN-202ENST00000376057 ATP8A2Q9NTI2 1148 aa13.17□□□□□ -0.3
PDPN-202ENST00000376057 IQSEC3Q9UPP2 1182 aaPredicted RBP13.17□□□□□ -0.3
PDPN-202ENST00000376057 MCM5P33992 734 aa13.17□□□□□ -0.3
PDPN-202ENST00000376057 TTLL5Q6EMB2 1281 aa13.17□□□□□ -0.3
PDPN-202ENST00000376057 DPP8Q6V1X1 898 aaPredicted RBP13.17□□□□□ -0.3
PDPN-202ENST00000376057 TPCN1Q9ULQ1 816 aa13.17□□□□□ -0.3
PDPN-202ENST00000376057 SLC4A4Q9Y6R1 1079 aa13.17□□□□□ -0.3
PDPN-202ENST00000376057 FOCADQ5VW36 1801 aa13.17□□□□□ -0.3
PDPN-202ENST00000376057 CPA1P15085 419 aa13.17□□□□□ -0.3
PDPN-202ENST00000376057 NFKBIBQ15653 356 aa13.17□□□□□ -0.3
PDPN-202ENST00000376057 SBK1Q52WX2 424 aa13.17□□□□□ -0.3
PDPN-202ENST00000376057 SUPT20HQ8NEM7 779 aa13.17□□□□□ -0.3
PDPN-202ENST00000376057 LLPHQ9BRT6 129 aaKnown RBP13.17□□□□□ -0.3
PDPN-202ENST00000376057 MRIQ9BWK5 157 aa13.17□□□□□ -0.3
PDPN-202ENST00000376057 NAPBQ9H115 298 aa13.17□□□□□ -0.3
PDPN-202ENST00000376057 PSME4Q14997 1843 aa13.16□□□□□ -0.3
PDPN-202ENST00000376057 PTMSP20962 102 aa13.16□□□□□ -0.3
PDPN-202ENST00000376057 ME3Q16798 604 aa13.16□□□□□ -0.3
PDPN-202ENST00000376057 DDX60LQ5H9U9 1706 aaKnown RBP13.16□□□□□ -0.3
PDPN-202ENST00000376057 Q6ZUG5 572 aa13.16□□□□□ -0.3
PDPN-202ENST00000376057 PODNQ7Z5L7 613 aa13.16□□□□□ -0.3
PDPN-202ENST00000376057 SPRYD3Q8NCJ5 442 aa13.16□□□□□ -0.3
PDPN-202ENST00000376057 KRT23Q9C075 422 aa13.16□□□□□ -0.3
PDPN-202ENST00000376057 ZC3H12CQ9C0D7 883 aaKnown RBP13.16□□□□□ -0.3
PDPN-202ENST00000376057 RNF41Q9H4P4 317 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms