RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 HAND2P61296 217 aa17.7■□□□□ 0.42
MSH5-203ENST00000375750 ELF2Q15723 593 aa17.7■□□□□ 0.42
MSH5-203ENST00000375750 PTPN21Q16825 1174 aa17.7■□□□□ 0.42
MSH5-203ENST00000375750 HSP90AB3PQ58FF7 597 aa17.7■□□□□ 0.42
MSH5-203ENST00000375750 CLIC4Q9Y696 253 aa17.7■□□□□ 0.42
MSH5-203ENST00000375750 SPATA31A6Q5VVP1 1343 aa17.7■□□□□ 0.42
MSH5-203ENST00000375750 PALLDQ8WX93 1383 aa17.7■□□□□ 0.42
MSH5-203ENST00000375750 TJP1Q07157 1748 aa17.7■□□□□ 0.42
MSH5-203ENST00000375750 FDPSP14324 419 aaKnown RBP17.69■□□□□ 0.42
MSH5-203ENST00000375750 PDIA3P30101 505 aaKnown RBP17.69■□□□□ 0.42
MSH5-203ENST00000375750 NDUFA8P51970 172 aa17.69■□□□□ 0.42
MSH5-203ENST00000375750 DPCR1Q3MIW9 517 aa17.69■□□□□ 0.42
MSH5-203ENST00000375750 NYAP1Q6ZVC0 841 aa17.69■□□□□ 0.42
MSH5-203ENST00000375750 RBM6P78332 1123 aaKnown RBP17.69■□□□□ 0.42
MSH5-203ENST00000375750 EXOSC10Q01780 885 aaKnown RBP17.69■□□□□ 0.42
MSH5-203ENST00000375750 FAM160A1Q05DH4 1040 aa17.69■□□□□ 0.42
MSH5-203ENST00000375750 MEX3CQ5U5Q3 659 aaKnown RBP17.69■□□□□ 0.42
MSH5-203ENST00000375750 NLRP10Q86W26 655 aa17.69■□□□□ 0.42
MSH5-203ENST00000375750 KBTBD3Q8NAB2 608 aa17.69■□□□□ 0.42
MSH5-203ENST00000375750 ZBTB38Q8NAP3 1195 aaPredicted RBP17.69■□□□□ 0.42
MSH5-203ENST00000375750 SDF4Q9BRK5 362 aa17.69■□□□□ 0.42
MSH5-203ENST00000375750 ST7Q9NRC1 585 aa17.69■□□□□ 0.42
MSH5-203ENST00000375750 NAA16Q6N069 864 aaPredicted RBP17.68■□□□□ 0.42
MSH5-203ENST00000375750 CCAR2Q8N163 923 aaKnown RBP17.68■□□□□ 0.42
MSH5-203ENST00000375750 CCDC87Q9NVE4 849 aa17.68■□□□□ 0.42
MSH5-203ENST00000375750 DDX41Q9UJV9 622 aaKnown RBP17.68■□□□□ 0.42
MSH5-203ENST00000375750 LRRC24Q50LG9 513 aa17.68■□□□□ 0.42
MSH5-203ENST00000375750 ZNF771Q7L3S4 317 aaPredicted RBP17.68■□□□□ 0.42
MSH5-203ENST00000375750 KIF18AQ8NI77 898 aa17.68■□□□□ 0.42
MSH5-203ENST00000375750 FEZ1Q99689 392 aa17.68■□□□□ 0.42
MSH5-203ENST00000375750 PCCAP05165 728 aaPredicted RBP17.68■□□□□ 0.42
MSH5-203ENST00000375750 HSPD1P10809 573 aaKnown RBP17.68■□□□□ 0.42
MSH5-203ENST00000375750 EIF5P55010 431 aaKnown RBP17.68■□□□□ 0.42
MSH5-203ENST00000375750 ATG9AQ7Z3C6 839 aa17.68■□□□□ 0.42
MSH5-203ENST00000375750 ANO10Q9NW15 660 aa17.68■□□□□ 0.42
MSH5-203ENST00000375750 PAG1Q9NWQ8 432 aa17.68■□□□□ 0.42
MSH5-203ENST00000375750 PUS3Q9BZE2 481 aaKnown RBP17.67■□□□□ 0.42
MSH5-203ENST00000375750 CGNQ9P2M7 1197 aaKnown RBP17.67■□□□□ 0.42
MSH5-203ENST00000375750 M0R2C6 588 aa17.67■□□□□ 0.42
MSH5-203ENST00000375750 SMC2O95347 1197 aa17.67■□□□□ 0.42
MSH5-203ENST00000375750 FBXO38Q6PIJ6 1188 aa17.67■□□□□ 0.42
MSH5-203ENST00000375750 FMR1NBQ8N0W7 255 aaPredicted RBP17.67■□□□□ 0.42
MSH5-203ENST00000375750 LLPHQ9BRT6 129 aaKnown RBP17.66■□□□□ 0.42
MSH5-203ENST00000375750 XPO4Q9C0E2 1151 aaKnown RBP17.66■□□□□ 0.42
MSH5-203ENST00000375750 IFNKQ9P0W0 207 aa17.66■□□□□ 0.42
MSH5-203ENST00000375750 LAMA4Q16363 1823 aa17.66■□□□□ 0.42
MSH5-203ENST00000375750 CTAGE5O15320 804 aa17.66■□□□□ 0.42
MSH5-203ENST00000375750 TMC6Q7Z403 805 aa17.66■□□□□ 0.42
MSH5-203ENST00000375750 CEP57L1Q8IYX8 460 aa17.66■□□□□ 0.42
MSH5-203ENST00000375750 SYCP1Q15431 976 aa17.65■□□□□ 0.42
MSH5-203ENST00000375750 CCDC57Q2TAC2 916 aa17.65■□□□□ 0.42
MSH5-203ENST00000375750 ARMCX5Q6P1M9 558 aa17.65■□□□□ 0.42
MSH5-203ENST00000375750 ZNF396Q96N95 335 aaPredicted RBP17.65■□□□□ 0.42
MSH5-203ENST00000375750 TRMT112Q9UI30 125 aaKnown RBP17.65■□□□□ 0.42
MSH5-203ENST00000375750 CARMIL3Q8ND23 1372 aa17.65■□□□□ 0.42
MSH5-203ENST00000375750 MAST3O60307 1309 aa17.65■□□□□ 0.42
MSH5-203ENST00000375750 SALL1Q9NSC2 1324 aa17.65■□□□□ 0.42
MSH5-203ENST00000375750 ERVV-1B6SEH8 477 aa17.65■□□□□ 0.42
MSH5-203ENST00000375750 E4F1Q66K89 784 aaPredicted RBP17.65■□□□□ 0.42
MSH5-203ENST00000375750 MRPS27Q92552 414 aaKnown RBP17.65■□□□□ 0.42
MSH5-203ENST00000375750 UBN2Q6ZU65 1347 aa17.65■□□□□ 0.42
MSH5-203ENST00000375750 CAVIN2O95810 425 aa17.64■□□□□ 0.41
MSH5-203ENST00000375750 GOLGA8FQ08AF8 430 aa17.64■□□□□ 0.41
MSH5-203ENST00000375750 GOLGA8DPQ0D2H9 430 aa17.64■□□□□ 0.41
MSH5-203ENST00000375750 SMARCC1Q92922 1105 aaPredicted RBP17.64■□□□□ 0.41
MSH5-203ENST00000375750 EYA2O00167 538 aa17.63■□□□□ 0.41
MSH5-203ENST00000375750 SF3A1Q15459 793 aaKnown RBP17.63■□□□□ 0.41
MSH5-203ENST00000375750 SYT10Q6XYQ8 523 aa17.63■□□□□ 0.41
MSH5-203ENST00000375750 DENND2AQ9ULE3 1009 aa17.63■□□□□ 0.41
MSH5-203ENST00000375750 SH3TC1Q8TE82 1336 aa17.63■□□□□ 0.41
MSH5-203ENST00000375750 KIF28PB7ZC32 967 aa17.63■□□□□ 0.41
MSH5-203ENST00000375750 FKBP4Q02790 459 aaKnown RBP eCLIP17.63■□□□□ 0.41
MSH5-203ENST00000375750 STK38Q15208 465 aa17.63■□□□□ 0.41
MSH5-203ENST00000375750 ZMYM1Q5SVZ6 1142 aa17.63■□□□□ 0.41
MSH5-203ENST00000375750 GORABQ5T7V8 394 aa17.63■□□□□ 0.41
MSH5-203ENST00000375750 SMIM5Q71RC9 77 aa17.63■□□□□ 0.41
MSH5-203ENST00000375750 ZNF34Q8IZ26 560 aa17.63■□□□□ 0.41
MSH5-203ENST00000375750 OSBP2Q969R2 916 aa17.63■□□□□ 0.41
MSH5-203ENST00000375750 GJD4Q96KN9 370 aaPredicted RBP17.63■□□□□ 0.41
MSH5-203ENST00000375750 NEDD4P46934 1319 aa17.63■□□□□ 0.41
MSH5-203ENST00000375750 AFF2P51816 1311 aa17.63■□□□□ 0.41
MSH5-203ENST00000375750 CSF1RP07333 972 aa17.62■□□□□ 0.41
MSH5-203ENST00000375750 SLFN14P0C7P3 912 aa17.62■□□□□ 0.41
MSH5-203ENST00000375750 IL15P40933 162 aaPredicted RBP17.62■□□□□ 0.41
MSH5-203ENST00000375750 ERCC6LQ2NKX8 1250 aa17.62■□□□□ 0.41
MSH5-203ENST00000375750 NKX2-3Q8TAU0 364 aa17.62■□□□□ 0.41
MSH5-203ENST00000375750 AIFM3Q96NN9 605 aa17.62■□□□□ 0.41
MSH5-203ENST00000375750 PLA2G12BQ9BX93 195 aa17.62■□□□□ 0.41
MSH5-203ENST00000375750 MORC2Q9Y6X9 1032 aaPredicted RBP17.62■□□□□ 0.41
MSH5-203ENST00000375750 IRS4O14654 1257 aaPredicted RBP17.62■□□□□ 0.41
MSH5-203ENST00000375750 LMOD1P29536 600 aaPredicted RBP17.62■□□□□ 0.41
MSH5-203ENST00000375750 MARCKSP29966 332 aaPredicted RBP17.62■□□□□ 0.41
MSH5-203ENST00000375750 LINC00301Q8NCQ3 95 aa17.62■□□□□ 0.41
MSH5-203ENST00000375750 LINC00116Q8NCU8 138 aa17.62■□□□□ 0.41
MSH5-203ENST00000375750 ZNF446Q9NWS9 450 aa17.62■□□□□ 0.41
MSH5-203ENST00000375750 KIAA1468Q9P260 1216 aa17.62■□□□□ 0.41
MSH5-203ENST00000375750 KIF20AO95235 890 aa17.62■□□□□ 0.41
MSH5-203ENST00000375750 HMGB1P09429 215 aaKnown RBP17.62■□□□□ 0.41
MSH5-203ENST00000375750 ATP1A3P13637 1013 aa17.62■□□□□ 0.41
MSH5-203ENST00000375750 ZNF397Q8NF99 534 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms