RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 APOBRQ0VD83 1088 aa9.63□□□□□ -0.87
UBR4-202ENST00000375224 PI16Q6UXB8 463 aa9.63□□□□□ -0.87
UBR4-202ENST00000375224 CDC37L1Q7L3B6 337 aa9.63□□□□□ -0.87
UBR4-202ENST00000375224 HELBQ8NG08 1087 aaPredicted RBP9.63□□□□□ -0.87
UBR4-202ENST00000375224 PIH1D3Q9NQM4 214 aaKnown RBP9.63□□□□□ -0.87
UBR4-202ENST00000375224 ZNF532Q9HCE3 1301 aa9.63□□□□□ -0.87
UBR4-202ENST00000375224 ALX1Q15699 326 aa9.63□□□□□ -0.87
UBR4-202ENST00000375224 TTLL5Q6EMB2 1281 aa9.63□□□□□ -0.87
UBR4-202ENST00000375224 NAA16Q6N069 864 aaPredicted RBP9.63□□□□□ -0.87
UBR4-202ENST00000375224 ANKRD18AQ8IVF6 992 aa9.63□□□□□ -0.87
UBR4-202ENST00000375224 AIDAQ96BJ3 306 aa9.63□□□□□ -0.87
UBR4-202ENST00000375224 LRRC2Q9BYS8 371 aa9.63□□□□□ -0.87
UBR4-202ENST00000375224 GNL3LQ9NVN8 582 aaKnown RBP9.63□□□□□ -0.87
UBR4-202ENST00000375224 USP21Q9UK80 565 aa9.63□□□□□ -0.87
UBR4-202ENST00000375224 RPS6KA4O75676 772 aa9.62□□□□□ -0.87
UBR4-202ENST00000375224 SLC10A5Q5PT55 438 aa9.62□□□□□ -0.87
UBR4-202ENST00000375224 PPP1R9BQ96SB3 815 aa9.62□□□□□ -0.87
UBR4-202ENST00000375224 GNAT2P19087 354 aa9.62□□□□□ -0.87
UBR4-202ENST00000375224 NSUN7Q8NE18 718 aaKnown RBP9.62□□□□□ -0.87
UBR4-202ENST00000375224 NARFQ9UHQ1 456 aa9.62□□□□□ -0.87
UBR4-202ENST00000375224 DYNC1I1O14576 645 aa9.62□□□□□ -0.87
UBR4-202ENST00000375224 PDIA3P30101 505 aaKnown RBP9.62□□□□□ -0.87
UBR4-202ENST00000375224 CHRNDQ07001 517 aa9.62□□□□□ -0.87
UBR4-202ENST00000375224 ATL3Q6DD88 541 aa9.62□□□□□ -0.87
UBR4-202ENST00000375224 ZNF771Q7L3S4 317 aaPredicted RBP9.62□□□□□ -0.87
UBR4-202ENST00000375224 CERS3Q8IU89 383 aa9.62□□□□□ -0.87
UBR4-202ENST00000375224 MB21D2Q8IYB1 491 aaPredicted RBP9.62□□□□□ -0.87
UBR4-202ENST00000375224 RBSNQ9H1K0 784 aa9.62□□□□□ -0.87
UBR4-202ENST00000375224 CFAP45Q9UL16 551 aa9.62□□□□□ -0.87
UBR4-202ENST00000375224 DOCK2Q92608 1830 aa9.62□□□□□ -0.87
UBR4-202ENST00000375224 TCRBV5S4A2TA0A5A2 114 aa9.61□□□□□ -0.87
UBR4-202ENST00000375224 GOLGA6L4A6NEF3 574 aa9.61□□□□□ -0.87
UBR4-202ENST00000375224 FOXP2O15409 715 aa9.61□□□□□ -0.87
UBR4-202ENST00000375224 PRC1O43663 620 aa9.61□□□□□ -0.87
UBR4-202ENST00000375224 JAK2O60674 1132 aa9.61□□□□□ -0.87
UBR4-202ENST00000375224 UBE4AQ14139 1066 aa9.61□□□□□ -0.87
UBR4-202ENST00000375224 BSDC1Q9NW68 430 aaPredicted RBP9.61□□□□□ -0.87
UBR4-202ENST00000375224 SCN7AQ01118 1682 aa9.61□□□□□ -0.87
UBR4-202ENST00000375224 NHSQ6T4R5 1651 aa9.61□□□□□ -0.87
UBR4-202ENST00000375224 PTPDC1A2A3K4 754 aa9.61□□□□□ -0.87
UBR4-202ENST00000375224 ZPR1O75312 459 aa9.61□□□□□ -0.87
UBR4-202ENST00000375224 HAND2P61296 217 aa9.61□□□□□ -0.87
UBR4-202ENST00000375224 RASGRF1Q13972 1273 aa9.61□□□□□ -0.87
UBR4-202ENST00000375224 AXDND1Q5T1B0 1012 aaPredicted RBP9.61□□□□□ -0.87
UBR4-202ENST00000375224 FERMT3Q86UX7 667 aa9.61□□□□□ -0.87
UBR4-202ENST00000375224 ERFEQ4G0M1 354 aa9.61□□□□□ -0.87
UBR4-202ENST00000375224 SPATA32Q96LK8 384 aa9.61□□□□□ -0.87
UBR4-202ENST00000375224 STRBPQ96SI9 672 aaKnown RBP9.61□□□□□ -0.87
UBR4-202ENST00000375224 SETDB2Q96T68 719 aa9.61□□□□□ -0.87
UBR4-202ENST00000375224 NACAP1Q9BZK3 213 aa9.61□□□□□ -0.87
UBR4-202ENST00000375224 WWC3Q9ULE0 1092 aa9.61□□□□□ -0.87
UBR4-202ENST00000375224 THSD7AQ9UPZ6 1657 aa9.6□□□□□ -0.87
UBR4-202ENST00000375224 UVSSAQ2YD98 709 aa9.6□□□□□ -0.87
UBR4-202ENST00000375224 DDX11Q96FC9 970 aa9.6□□□□□ -0.87
UBR4-202ENST00000375224 BTAF1O14981 1849 aa9.6□□□□□ -0.87
UBR4-202ENST00000375224 A0A0G2JLW4 131 aa9.6□□□□□ -0.87
UBR4-202ENST00000375224 CCT2P78371 535 aaKnown RBP9.6□□□□□ -0.87
UBR4-202ENST00000375224 CBX1P83916 185 aa9.6□□□□□ -0.87
UBR4-202ENST00000375224 RESTQ13127 1097 aa9.6□□□□□ -0.87
UBR4-202ENST00000375224 CAVIN4Q5BKX8 364 aa9.6□□□□□ -0.87
UBR4-202ENST00000375224 MAGEB6Q8N7X4 407 aa9.6□□□□□ -0.87
UBR4-202ENST00000375224 TMEM87BQ96K49 555 aa9.6□□□□□ -0.87
UBR4-202ENST00000375224 RTCBQ9Y3I0 505 aaKnown RBP9.6□□□□□ -0.87
UBR4-202ENST00000375224 ZSCAN30Q86W11 494 aa9.59□□□□□ -0.87
UBR4-202ENST00000375224 ZNF396Q96N95 335 aaPredicted RBP9.59□□□□□ -0.87
UBR4-202ENST00000375224 NLRP3Q96P20 1036 aa9.59□□□□□ -0.87
UBR4-202ENST00000375224 NAPBQ9H115 298 aa9.59□□□□□ -0.87
UBR4-202ENST00000375224 CNNM2Q9H8M5 875 aa9.59□□□□□ -0.87
UBR4-202ENST00000375224 CCNL1Q9UK58 526 aaPredicted RBP9.59□□□□□ -0.87
UBR4-202ENST00000375224 MYO5AQ9Y4I1 1855 aaKnown RBP9.59□□□□□ -0.87
UBR4-202ENST00000375224 PNPLA7Q6ZV29 1317 aa9.59□□□□□ -0.87
UBR4-202ENST00000375224 SALL1Q9NSC2 1324 aa9.59□□□□□ -0.87
UBR4-202ENST00000375224 ZBTB22O15209 634 aa9.59□□□□□ -0.87
UBR4-202ENST00000375224 BCAMP50895 628 aa9.59□□□□□ -0.87
UBR4-202ENST00000375224 TPTE2Q6XPS3 522 aa9.59□□□□□ -0.87
UBR4-202ENST00000375224 TTC6Q86TZ1 520 aa9.59□□□□□ -0.87
UBR4-202ENST00000375224 ZNF622Q969S3 477 aaKnown RBP eCLIP9.59□□□□□ -0.872e-11■■□□□ 12.6
UBR4-202ENST00000375224 LRP2BPQ9P2M1 347 aa9.59□□□□□ -0.87
UBR4-202ENST00000375224 KLF18A0A0U1RQI7 1052 aa9.59□□□□□ -0.87
UBR4-202ENST00000375224 CPLX1O14810 134 aa9.59□□□□□ -0.87
UBR4-202ENST00000375224 CTDNEP1O95476 244 aa9.59□□□□□ -0.87
UBR4-202ENST00000375224 HS1BP3Q53T59 392 aa9.59□□□□□ -0.87
UBR4-202ENST00000375224 MEX3CQ5U5Q3 659 aaKnown RBP9.59□□□□□ -0.87
UBR4-202ENST00000375224 CPLX2Q6PUV4 134 aaKnown RBP9.59□□□□□ -0.87
UBR4-202ENST00000375224 CHST3Q7LGC8 479 aa9.59□□□□□ -0.87
UBR4-202ENST00000375224 ANGEL1Q9UNK9 670 aaKnown RBP9.59□□□□□ -0.87
UBR4-202ENST00000375224 SEMA3EO15041 775 aa9.58□□□□□ -0.88
UBR4-202ENST00000375224 GNPATO15228 680 aa9.58□□□□□ -0.88
UBR4-202ENST00000375224 CDKL5O76039 1030 aa9.58□□□□□ -0.88
UBR4-202ENST00000375224 TBC1D9BQ66K14 1250 aa9.58□□□□□ -0.88
UBR4-202ENST00000375224 NBPF5PQ86XG9 351 aaPredicted RBP9.58□□□□□ -0.88
UBR4-202ENST00000375224 IFNL3Q8IZI9 196 aa9.58□□□□□ -0.88
UBR4-202ENST00000375224 LEO1Q8WVC0 666 aaPredicted RBP9.58□□□□□ -0.88
UBR4-202ENST00000375224 KRT23Q9C075 422 aa9.58□□□□□ -0.88
UBR4-202ENST00000375224 ANKRD2Q9GZV1 360 aa9.58□□□□□ -0.88
UBR4-202ENST00000375224 DENND2AQ9ULE3 1009 aa9.58□□□□□ -0.88
UBR4-202ENST00000375224 ZNF804BA4D1E1 1349 aa9.58□□□□□ -0.88
UBR4-202ENST00000375224 CARMIL3Q8ND23 1372 aa9.58□□□□□ -0.88
UBR4-202ENST00000375224 GOLGA8BA8MQT2 603 aa9.58□□□□□ -0.88
UBR4-202ENST00000375224 MBD4O95243 580 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms