RNA–Protein interactions for RNA: ENST00000374043.6

PACSIN1-202, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

TSL 1 (best) BASIC

Gene PACSIN1, Length 4,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-202ENST00000374043 NOL7Q9UMY1 257 aaKnown RBP13.66□□□□□ -0.22
PACSIN1-202ENST00000374043 IKQ13123 557 aaPredicted RBP13.66□□□□□ -0.22
PACSIN1-202ENST00000374043 NSUN7Q8NE18 718 aaKnown RBP13.66□□□□□ -0.22
PACSIN1-202ENST00000374043 CTCFLQ8NI51 663 aaPredicted RBP13.66□□□□□ -0.22
PACSIN1-202ENST00000374043 PIH1D3Q9NQM4 214 aaKnown RBP13.66□□□□□ -0.22
PACSIN1-202ENST00000374043 RBM5P52756 815 aaKnown RBP eCLIP13.66□□□□□ -0.22
PACSIN1-202ENST00000374043 PTPN21Q16825 1174 aa13.66□□□□□ -0.22
PACSIN1-202ENST00000374043 TPM3P06753 285 aa13.65□□□□□ -0.22
PACSIN1-202ENST00000374043 LRMPQ12912 555 aa13.65□□□□□ -0.22
PACSIN1-202ENST00000374043 SUSD4Q5VX71 490 aa13.65□□□□□ -0.22
PACSIN1-202ENST00000374043 CATIPQ7Z7H3 387 aa13.65□□□□□ -0.22
PACSIN1-202ENST00000374043 MEGF6O75095 1541 aa13.65□□□□□ -0.22
PACSIN1-202ENST00000374043 RFX5P48382 616 aaPredicted RBP13.65□□□□□ -0.22
PACSIN1-202ENST00000374043 NLRP5P59047 1200 aa13.65□□□□□ -0.22
PACSIN1-202ENST00000374043 PPP1R9BQ96SB3 815 aa13.65□□□□□ -0.22
PACSIN1-202ENST00000374043 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.65□□□□□ -0.22
PACSIN1-202ENST00000374043 V9GYY5 206 aaPredicted RBP13.65□□□□□ -0.22
PACSIN1-202ENST00000374043 TNNT1P13805 278 aa13.65□□□□□ -0.22
PACSIN1-202ENST00000374043 IFIT1BQ5T764 474 aaKnown RBP13.65□□□□□ -0.22
PACSIN1-202ENST00000374043 AATFQ9NY61 560 aaKnown RBP eCLIP13.65□□□□□ -0.22
PACSIN1-202ENST00000374043 EPB41L2O43491 1005 aaKnown RBP13.64□□□□□ -0.23
PACSIN1-202ENST00000374043 PFKFB2O60825 505 aa13.64□□□□□ -0.23
PACSIN1-202ENST00000374043 KLHL34Q8N239 644 aa13.64□□□□□ -0.23
PACSIN1-202ENST00000374043 AK7Q96M32 723 aa13.64□□□□□ -0.23
PACSIN1-202ENST00000374043 RNF41Q9H4P4 317 aaPredicted RBP13.64□□□□□ -0.23
PACSIN1-202ENST00000374043 CLIC4Q9Y696 253 aa13.64□□□□□ -0.23
PACSIN1-202ENST00000374043 CYP2D7A0A087X1C5 515 aa13.64□□□□□ -0.23
PACSIN1-202ENST00000374043 CCDC112Q8NEF3 446 aa13.64□□□□□ -0.23
PACSIN1-202ENST00000374043 MCM9Q9NXL9 1143 aa13.64□□□□□ -0.23
PACSIN1-202ENST00000374043 TNS3Q68CZ2 1445 aa13.64□□□□□ -0.23
PACSIN1-202ENST00000374043 KRT40Q6A162 431 aa13.63□□□□□ -0.23
PACSIN1-202ENST00000374043 ZSCAN29Q8IWY8 852 aaPredicted RBP13.63□□□□□ -0.23
PACSIN1-202ENST00000374043 TRIM34Q9BYJ4 488 aa13.63□□□□□ -0.23
PACSIN1-202ENST00000374043 CLSTN2Q9H4D0 955 aa13.63□□□□□ -0.23
PACSIN1-202ENST00000374043 CABP5Q9NP86 173 aa13.63□□□□□ -0.23
PACSIN1-202ENST00000374043 NRBP1Q9UHY1 535 aa13.63□□□□□ -0.23
PACSIN1-202ENST00000374043 DENND2AQ9ULE3 1009 aa13.63□□□□□ -0.23
PACSIN1-202ENST00000374043 CCDC196A0A1B0GTZ2 297 aa13.63□□□□□ -0.23
PACSIN1-202ENST00000374043 OFD1O75665 1012 aa13.63□□□□□ -0.23
PACSIN1-202ENST00000374043 FAM47AQ5JRC9 791 aa13.63□□□□□ -0.23
PACSIN1-202ENST00000374043 KCNG4Q8TDN1 519 aa13.63□□□□□ -0.23
PACSIN1-202ENST00000374043 WASF1Q92558 559 aa13.63□□□□□ -0.23
PACSIN1-202ENST00000374043 ESR2Q92731 530 aa13.63□□□□□ -0.23
PACSIN1-202ENST00000374043 RPGRQ92834 1020 aaKnown RBP13.63□□□□□ -0.23
PACSIN1-202ENST00000374043 NCAPD2Q15021 1401 aa13.63□□□□□ -0.23
PACSIN1-202ENST00000374043 SFPQP23246 707 aaKnown RBP eCLIP13.63□□□□□ -0.23
PACSIN1-202ENST00000374043 STX17P56962 302 aa13.63□□□□□ -0.23
PACSIN1-202ENST00000374043 STAMQ92783 540 aa13.63□□□□□ -0.23
PACSIN1-202ENST00000374043 CLIC6Q96NY7 704 aa13.63□□□□□ -0.23
PACSIN1-202ENST00000374043 CTAGE5O15320 804 aa13.63□□□□□ -0.23
PACSIN1-202ENST00000374043 CLSTN1O94985 981 aa13.63□□□□□ -0.23
PACSIN1-202ENST00000374043 CHRNDQ07001 517 aa13.63□□□□□ -0.23
PACSIN1-202ENST00000374043 PLIN2Q99541 437 aa13.63□□□□□ -0.23
PACSIN1-202ENST00000374043 PRDM10Q9NQV6 1147 aa13.63□□□□□ -0.23
PACSIN1-202ENST00000374043 SAP30BPQ9UHR5 308 aaKnown RBP13.63□□□□□ -0.23
PACSIN1-202ENST00000374043 RPAP1Q9BWH6 1393 aaPredicted RBP13.62□□□□□ -0.23
PACSIN1-202ENST00000374043 IFNL3Q8IZI9 196 aa13.62□□□□□ -0.23
PACSIN1-202ENST00000374043 KRT23Q9C075 422 aa13.62□□□□□ -0.23
PACSIN1-202ENST00000374043 KDM6AO15550 1401 aaPredicted RBP13.62□□□□□ -0.23
PACSIN1-202ENST00000374043 RABL6Q3YEC7 729 aaPredicted RBP13.62□□□□□ -0.23
PACSIN1-202ENST00000374043 ZNF444Q8N0Y2 327 aaPredicted RBP13.62□□□□□ -0.23
PACSIN1-202ENST00000374043 IFNKQ9P0W0 207 aa13.62□□□□□ -0.23
PACSIN1-202ENST00000374043 SRP68Q9UHB9 627 aaKnown RBP13.62□□□□□ -0.23
PACSIN1-202ENST00000374043 V9GY48 417 aaPredicted RBP13.62□□□□□ -0.23
PACSIN1-202ENST00000374043 ZNF609O15014 1411 aa13.62□□□□□ -0.23
PACSIN1-202ENST00000374043 NCOA3Q9Y6Q9 1424 aa13.62□□□□□ -0.23
PACSIN1-202ENST00000374043 MPHOSPH10O00566 681 aaKnown RBP13.62□□□□□ -0.23
PACSIN1-202ENST00000374043 RIMBP2O15034 1052 aa13.62□□□□□ -0.23
PACSIN1-202ENST00000374043 SKILP12757 684 aa13.62□□□□□ -0.23
PACSIN1-202ENST00000374043 FAM160A1Q05DH4 1040 aa13.62□□□□□ -0.23
PACSIN1-202ENST00000374043 ANO1Q5XXA6 986 aa13.62□□□□□ -0.23
PACSIN1-202ENST00000374043 DHX58Q96C10 678 aa13.62□□□□□ -0.23
PACSIN1-202ENST00000374043 RASGRF1Q13972 1273 aa13.61□□□□□ -0.23
PACSIN1-202ENST00000374043 CCNL1Q9UK58 526 aaPredicted RBP13.61□□□□□ -0.23
PACSIN1-202ENST00000374043 SSBP05455 408 aaKnown RBP eCLIP13.61□□□□□ -0.23
PACSIN1-202ENST00000374043 DIS3L2Q8IYB7 885 aaKnown RBP13.61□□□□□ -0.23
PACSIN1-202ENST00000374043 PCDHA7Q9UN72 937 aa13.61□□□□□ -0.23
PACSIN1-202ENST00000374043 RTCBQ9Y3I0 505 aaKnown RBP13.61□□□□□ -0.23
PACSIN1-202ENST00000374043 PICALMQ13492 652 aa13.61□□□□□ -0.23
PACSIN1-202ENST00000374043 USPL1Q5W0Q7 1092 aa13.61□□□□□ -0.23
PACSIN1-202ENST00000374043 TPTE2Q6XPS3 522 aa13.61□□□□□ -0.23
PACSIN1-202ENST00000374043 UIMC1Q96RL1 719 aa13.61□□□□□ -0.23
PACSIN1-202ENST00000374043 LLPHQ9BRT6 129 aaKnown RBP13.61□□□□□ -0.23
PACSIN1-202ENST00000374043 TOM1O60784 492 aa13.6□□□□□ -0.23
PACSIN1-202ENST00000374043 TPM1P09493 284 aa13.6□□□□□ -0.23
PACSIN1-202ENST00000374043 DYNLL1P63167 89 aaKnown RBP13.6□□□□□ -0.23
PACSIN1-202ENST00000374043 PTPN14Q15678 1187 aa13.6□□□□□ -0.23
PACSIN1-202ENST00000374043 MNS1Q8NEH6 495 aa13.6□□□□□ -0.23
PACSIN1-202ENST00000374043 PGBD1Q96JS3 809 aa13.6□□□□□ -0.23
PACSIN1-202ENST00000374043 ARHGAP23Q9P227 1491 aa13.6□□□□□ -0.23
PACSIN1-202ENST00000374043 BTBD18B2RXH4 712 aa13.6□□□□□ -0.23
PACSIN1-202ENST00000374043 MYSM1Q5VVJ2 828 aa13.6□□□□□ -0.23
PACSIN1-202ENST00000374043 VPS54Q9P1Q0 977 aa13.6□□□□□ -0.23
PACSIN1-202ENST00000374043 CYP19A1P11511 503 aaPredicted RBP13.6□□□□□ -0.23
PACSIN1-202ENST00000374043 NDUFA8P51970 172 aa13.6□□□□□ -0.23
PACSIN1-202ENST00000374043 ZNF174Q15697 407 aa13.6□□□□□ -0.23
PACSIN1-202ENST00000374043 ERFEQ4G0M1 354 aa13.6□□□□□ -0.23
PACSIN1-202ENST00000374043 LCORLQ8N3X6 602 aa13.6□□□□□ -0.23
PACSIN1-202ENST00000374043 GPR101Q96P66 508 aaPredicted RBP13.6□□□□□ -0.23
PACSIN1-202ENST00000374043 ISCA1Q9BUE6 129 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms