RNA–Protein interactions for RNA: ENST00000373645.3

SP140-202, Transcript of SP140 nuclear body protein, humanhuman

TSL 1 (best) BASIC

Gene SP140, Length 814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-202ENST00000373645 CDC5LQ99459 802 aaKnown RBP9.68□□□□□ -0.86
SP140-202ENST00000373645 CFHR5Q9BXR6 569 aa9.68□□□□□ -0.86
SP140-202ENST00000373645 BSDC1Q9NW68 430 aaPredicted RBP9.68□□□□□ -0.86
SP140-202ENST00000373645 COG6Q9Y2V7 657 aa9.68□□□□□ -0.86
SP140-202ENST00000373645 OTOFQ9HC10 1997 aa9.67□□□□□ -0.86
SP140-202ENST00000373645 CLRN2A0PK11 232 aa9.67□□□□□ -0.86
SP140-202ENST00000373645 GTF2IP78347 998 aa9.67□□□□□ -0.86
SP140-202ENST00000373645 MVPQ14764 893 aaKnown RBP9.67□□□□□ -0.86
SP140-202ENST00000373645 ERICH6BQ5W0A0 696 aa9.67□□□□□ -0.86
SP140-202ENST00000373645 ARMC9Q7Z3E5 817 aa9.67□□□□□ -0.86
SP140-202ENST00000373645 OGFOD1Q8N543 542 aa9.67□□□□□ -0.86
SP140-202ENST00000373645 TMEM57Q8N5G2 664 aa9.67□□□□□ -0.86
SP140-202ENST00000373645 CD99L2Q8TCZ2 262 aa9.67□□□□□ -0.86
SP140-202ENST00000373645 WNK4Q96J92 1243 aa9.67□□□□□ -0.86
SP140-202ENST00000373645 COA1Q9GZY4 146 aa9.67□□□□□ -0.86
SP140-202ENST00000373645 JAG2Q9Y219 1238 aa9.67□□□□□ -0.86
SP140-202ENST00000373645 TRIOBPQ9H2D6 2365 aa9.67□□□□□ -0.86
SP140-202ENST00000373645 LAMB1P07942 1786 aa9.66□□□□□ -0.86
SP140-202ENST00000373645 IRS2Q9Y4H2 1338 aa9.66□□□□□ -0.86
SP140-202ENST00000373645 EN2P19622 333 aaPredicted RBP9.66□□□□□ -0.86
SP140-202ENST00000373645 NEXNQ0ZGT2 675 aa9.66□□□□□ -0.86
SP140-202ENST00000373645 CRHR2Q13324 411 aa9.66□□□□□ -0.86
SP140-202ENST00000373645 BEND3Q5T5X7 828 aa9.66□□□□□ -0.86
SP140-202ENST00000373645 TTLL5Q6EMB2 1281 aa9.66□□□□□ -0.86
SP140-202ENST00000373645 APOBEC3FQ8IUX4 373 aaKnown RBP9.66□□□□□ -0.86
SP140-202ENST00000373645 ITPRIPQ8IWB1 547 aa9.66□□□□□ -0.86
SP140-202ENST00000373645 CDAN1Q8IWY9 1227 aa9.66□□□□□ -0.86
SP140-202ENST00000373645 CRBNQ96SW2 442 aa9.66□□□□□ -0.86
SP140-202ENST00000373645 SRCIN1Q9C0H9 1055 aa9.66□□□□□ -0.86
SP140-202ENST00000373645 DEFB129Q9H1M3 183 aa9.66□□□□□ -0.86
SP140-202ENST00000373645 CHMP4BQ9H444 224 aaKnown RBP9.66□□□□□ -0.86
SP140-202ENST00000373645 DDX19BQ9UMR2 479 aa9.66□□□□□ -0.86
SP140-202ENST00000373645 ZSWIM8A7E2V4 1837 aa9.66□□□□□ -0.86
SP140-202ENST00000373645 A0A1B0GUL6 1792 aa9.65□□□□□ -0.86
SP140-202ENST00000373645 RBBP6Q7Z6E9 1792 aaKnown RBP9.65□□□□□ -0.86
SP140-202ENST00000373645 CEP290O15078 2479 aa9.65□□□□□ -0.86
SP140-202ENST00000373645 ZNF804BA4D1E1 1349 aa9.65□□□□□ -0.86
SP140-202ENST00000373645 MYO3BQ8WXR4 1341 aa9.65□□□□□ -0.86
SP140-202ENST00000373645 NEURL1BA8MQ27 555 aa9.65□□□□□ -0.86
SP140-202ENST00000373645 F8W031 263 aaPredicted RBP9.65□□□□□ -0.86
SP140-202ENST00000373645 ALDH1L1O75891 902 aa9.65□□□□□ -0.86
SP140-202ENST00000373645 HSP90B1P14625 803 aaKnown RBP9.65□□□□□ -0.86
SP140-202ENST00000373645 ITGA6P23229 1130 aa9.65□□□□□ -0.86
SP140-202ENST00000373645 FXR1P51114 621 aaKnown RBP eCLIP9.65□□□□□ -0.86
SP140-202ENST00000373645 AAMPQ13685 434 aa9.65□□□□□ -0.86
SP140-202ENST00000373645 HELBQ8NG08 1087 aaPredicted RBP9.65□□□□□ -0.86
SP140-202ENST00000373645 LINS1Q8NG48 757 aa9.65□□□□□ -0.86
SP140-202ENST00000373645 EXOC6Q8TAG9 804 aa9.65□□□□□ -0.86
SP140-202ENST00000373645 PTPN18Q99952 460 aa9.65□□□□□ -0.86
SP140-202ENST00000373645 CACNA1FO60840 1977 aa9.64□□□□□ -0.87
SP140-202ENST00000373645 ECM29Q5VYK3 1845 aa9.64□□□□□ -0.87
SP140-202ENST00000373645 MANSC4A6NHS7 340 aaPredicted RBP9.64□□□□□ -0.87
SP140-202ENST00000373645 ZBTB7BO15156 539 aaPredicted RBP9.64□□□□□ -0.87
SP140-202ENST00000373645 TAF5LO75529 589 aa9.64□□□□□ -0.87
SP140-202ENST00000373645 CASP7P55210 303 aa9.64□□□□□ -0.87
SP140-202ENST00000373645 CHRNDQ07001 517 aa9.64□□□□□ -0.87
SP140-202ENST00000373645 MAP3K11Q16584 847 aa9.64□□□□□ -0.87
SP140-202ENST00000373645 NBPF12Q5TAG4 269 aaPredicted RBP9.64□□□□□ -0.87
SP140-202ENST00000373645 SLC10A4Q96EP9 437 aa9.64□□□□□ -0.87
SP140-202ENST00000373645 CD209Q9NNX6 404 aa9.64□□□□□ -0.87
SP140-202ENST00000373645 PTPN22Q9Y2R2 807 aa9.64□□□□□ -0.87
SP140-202ENST00000373645 COL1A1P02452 1464 aaPredicted RBP9.64□□□□□ -0.87
SP140-202ENST00000373645 H7C1W4 665 aa9.63□□□□□ -0.87
SP140-202ENST00000373645 MYCP01106 439 aaPredicted RBP9.63□□□□□ -0.87
SP140-202ENST00000373645 IGHMBP2P38935 993 aaKnown RBP9.63□□□□□ -0.87
SP140-202ENST00000373645 ATN1P54259 1190 aaPredicted RBP9.63□□□□□ -0.87
SP140-202ENST00000373645 DLGAP5Q15398 846 aa9.63□□□□□ -0.87
SP140-202ENST00000373645 CFAP100Q494V2 611 aa9.63□□□□□ -0.87
SP140-202ENST00000373645 ARMC5Q96C12 935 aa9.63□□□□□ -0.87
SP140-202ENST00000373645 GCC1Q96CN9 775 aa9.63□□□□□ -0.87
SP140-202ENST00000373645 PRMT6Q96LA8 375 aaPredicted RBP9.63□□□□□ -0.87
SP140-202ENST00000373645 VEZTQ9HBM0 779 aa9.63□□□□□ -0.87
SP140-202ENST00000373645 LEMD3Q9Y2U8 911 aa9.63□□□□□ -0.87
SP140-202ENST00000373645 GTF3C3Q9Y5Q9 886 aa9.63□□□□□ -0.87
SP140-202ENST00000373645 USP2O75604 605 aaPredicted RBP9.62□□□□□ -0.87
SP140-202ENST00000373645 ALDH1A1P00352 501 aa9.62□□□□□ -0.87
SP140-202ENST00000373645 GNAI3P08754 354 aa9.62□□□□□ -0.87
SP140-202ENST00000373645 ZBTB48P10074 688 aaPredicted RBP9.62□□□□□ -0.87
SP140-202ENST00000373645 ELP3Q9H9T3 547 aa9.62□□□□□ -0.87
SP140-202ENST00000373645 ZBTB40Q9NUA8 1239 aa9.62□□□□□ -0.87
SP140-202ENST00000373645 PTCH2Q9Y6C5 1203 aa9.62□□□□□ -0.87
SP140-202ENST00000373645 KCNJ4P48050 445 aa9.61□□□□□ -0.87
SP140-202ENST00000373645 MNX1P50219 401 aaPredicted RBP9.61□□□□□ -0.87
SP140-202ENST00000373645 GCKRQ14397 625 aa9.61□□□□□ -0.87
SP140-202ENST00000373645 RASA3Q14644 834 aa9.61□□□□□ -0.87
SP140-202ENST00000373645 BRI3BPQ8WY22 251 aa9.61□□□□□ -0.87
SP140-202ENST00000373645 ERO1AQ96HE7 468 aa9.61□□□□□ -0.87
SP140-202ENST00000373645 ZNF333Q96JL9 665 aa9.61□□□□□ -0.87
SP140-202ENST00000373645 MS4A4AQ96JQ5 239 aa9.61□□□□□ -0.87
SP140-202ENST00000373645 PLA2G12BQ9BX93 195 aa9.61□□□□□ -0.87
SP140-202ENST00000373645 ARHGAP39Q9C0H5 1083 aa9.61□□□□□ -0.87
SP140-202ENST00000373645 USP44Q9H0E7 712 aa9.61□□□□□ -0.87
SP140-202ENST00000373645 EFCC1Q9HA90 598 aa9.61□□□□□ -0.87
SP140-202ENST00000373645 C9orf78Q9NZ63 289 aaPredicted RBP9.61□□□□□ -0.87
SP140-202ENST00000373645 HDAC5Q9UQL6 1122 aa9.61□□□□□ -0.87
SP140-202ENST00000373645 COLQQ9Y215 455 aaPredicted RBP9.61□□□□□ -0.87
SP140-202ENST00000373645 PPP1R12BO60237 982 aaPredicted RBP9.6□□□□□ -0.87
SP140-202ENST00000373645 ECM2O94769 699 aaPredicted RBP9.6□□□□□ -0.87
SP140-202ENST00000373645 CSF1RP07333 972 aa9.6□□□□□ -0.87
SP140-202ENST00000373645 SP3Q02447 781 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms