RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 LUZP1Q86V48 1076 aa33.83■■■■□ 3.01
SSBP3-204ENST00000371320 ZNF830Q96NB3 372 aaPredicted RBP33.83■■■■□ 3.01
SSBP3-204ENST00000371320 CBX8Q9HC52 389 aa33.83■■■■□ 3.01
SSBP3-204ENST00000371320 ANGEL1Q9UNK9 670 aaKnown RBP33.83■■■■□ 3.01
SSBP3-204ENST00000371320 NIP7Q9Y221 180 aaKnown RBP eCLIP33.83■■■■□ 3.01
SSBP3-204ENST00000371320 OTUD7BQ6GQQ9 843 aa33.82■■■■□ 3
SSBP3-204ENST00000371320 DENND2AQ9ULE3 1009 aa33.81■■■■□ 3
SSBP3-204ENST00000371320 IGHMBP2P38935 993 aaKnown RBP33.81■■■■□ 3
SSBP3-204ENST00000371320 ME1P48163 572 aa33.81■■■■□ 3
SSBP3-204ENST00000371320 CCDC73Q6ZRK6 1079 aa33.81■■■■□ 3
SSBP3-204ENST00000371320 CYB5R4Q7L1T6 521 aa33.81■■■■□ 3
SSBP3-204ENST00000371320 MAGEB6Q8N7X4 407 aa33.81■■■■□ 3
SSBP3-204ENST00000371320 ARAP2Q8WZ64 1704 aa33.8■■■■□ 3
SSBP3-204ENST00000371320 ALX1Q15699 326 aa33.8■■■■□ 3
SSBP3-204ENST00000371320 FBXO18Q8NFZ0 1043 aa33.8■■■■□ 3
SSBP3-204ENST00000371320 MYO5AQ9Y4I1 1855 aaKnown RBP33.8■■■■□ 3
SSBP3-204ENST00000371320 NTSR2O95665 410 aa33.8■■■■□ 3
SSBP3-204ENST00000371320 GOLPH3LQ9H4A5 285 aa33.8■■■■□ 3
SSBP3-204ENST00000371320 TTC12Q9H892 705 aaPredicted RBP33.8■■■■□ 3
SSBP3-204ENST00000371320 CTAGE5O15320 804 aa33.79■■■■□ 3
SSBP3-204ENST00000371320 TPM2P07951 284 aa33.79■■■■□ 3
SSBP3-204ENST00000371320 RTEL1Q9NZ71 1219 aa33.79■■■■□ 3
SSBP3-204ENST00000371320 DDX60Q8IY21 1712 aaKnown RBP33.79■■■■□ 3
SSBP3-204ENST00000371320 SPATA31A5Q5VU36 1347 aa33.79■■■■□ 3
SSBP3-204ENST00000371320 SPATA31A7Q8IWB4 1347 aa33.79■■■■□ 3
SSBP3-204ENST00000371320 PATL2C9JE40 543 aaKnown RBP33.78■■■■□ 3
SSBP3-204ENST00000371320 NRAPQ86VF7 1730 aa33.78■■■■□ 3
SSBP3-204ENST00000371320 SH2B2O14492 632 aaPredicted RBP33.78■■■■□ 3
SSBP3-204ENST00000371320 B4E1Z4 1266 aa33.77■■■■□ 3
SSBP3-204ENST00000371320 MBD4O95243 580 aa33.77■■■■□ 3
SSBP3-204ENST00000371320 NKX2-3Q8TAU0 364 aa33.77■■■■□ 3
SSBP3-204ENST00000371320 R3HCC1Q9Y3T6 440 aaKnown RBP33.77■■■■□ 3
SSBP3-204ENST00000371320 RTL9Q8NET4 1388 aa33.77■■■■□ 3
SSBP3-204ENST00000371320 ZMYM6O95789 1325 aa33.77■■■■□ 3
SSBP3-204ENST00000371320 CAVIN2O95810 425 aa33.76■■■□□ 2.99
SSBP3-204ENST00000371320 ZNF165P49910 485 aa33.76■■■□□ 2.99
SSBP3-204ENST00000371320 METAP2P50579 478 aaKnown RBP eCLIP33.76■■■□□ 2.997e-7■■□□□ 14.3
SSBP3-204ENST00000371320 FAM160A1Q05DH4 1040 aa33.76■■■□□ 2.99
SSBP3-204ENST00000371320 SNW1Q13573 536 aaKnown RBP33.76■■■□□ 2.99
SSBP3-204ENST00000371320 TMEM87BQ96K49 555 aa33.76■■■□□ 2.99
SSBP3-204ENST00000371320 DNAJC25Q9H1X3 360 aa33.76■■■□□ 2.99
SSBP3-204ENST00000371320 NUTM2BA6NNL0 878 aaPredicted RBP33.75■■■□□ 2.99
SSBP3-204ENST00000371320 NUTM2EB1AL46 878 aaPredicted RBP33.75■■■□□ 2.99
SSBP3-204ENST00000371320 KINO60870 393 aaKnown RBP33.75■■■□□ 2.99
SSBP3-204ENST00000371320 TERF1P54274 439 aa33.75■■■□□ 2.99
SSBP3-204ENST00000371320 BRAPQ7Z569 592 aa33.75■■■□□ 2.99
SSBP3-204ENST00000371320 NUTM2AQ8IVF1 878 aaPredicted RBP33.75■■■□□ 2.99
SSBP3-204ENST00000371320 IFNL3Q8IZI9 196 aa33.75■■■□□ 2.99
SSBP3-204ENST00000371320 FSIP1Q8NA03 581 aa33.75■■■□□ 2.99
SSBP3-204ENST00000371320 NAPBQ9H115 298 aa33.75■■■□□ 2.99
SSBP3-204ENST00000371320 RREB1Q92766 1687 aa33.75■■■□□ 2.99
SSBP3-204ENST00000371320 POLR3DP05423 398 aaPredicted RBP33.75■■■□□ 2.99
SSBP3-204ENST00000371320 BCAMP50895 628 aa33.75■■■□□ 2.99
SSBP3-204ENST00000371320 SMARCC1Q92922 1105 aaPredicted RBP33.75■■■□□ 2.99
SSBP3-204ENST00000371320 NEDD4P46934 1319 aa33.74■■■□□ 2.99
SSBP3-204ENST00000371320 ENGASEQ8NFI3 743 aa33.74■■■□□ 2.99
SSBP3-204ENST00000371320 ARMT1Q9H993 441 aa33.74■■■□□ 2.99
SSBP3-204ENST00000371320 EPB41L4AQ9HCS5 686 aaPredicted RBP33.74■■■□□ 2.99
SSBP3-204ENST00000371320 PCDHA7Q9UN72 937 aa33.74■■■□□ 2.99
SSBP3-204ENST00000371320 ZNF652Q9Y2D9 606 aa33.74■■■□□ 2.99
SSBP3-204ENST00000371320 GOLGA6L6A8MZA4 724 aa33.73■■■□□ 2.99
SSBP3-204ENST00000371320 TPM3P06753 285 aa33.73■■■□□ 2.99
SSBP3-204ENST00000371320 TDRD7Q8NHU6 1098 aaKnown RBP33.73■■■□□ 2.99
SSBP3-204ENST00000371320 PIBF1Q8WXW3 757 aa33.73■■■□□ 2.99
SSBP3-204ENST00000371320 CDKL5O76039 1030 aa33.73■■■□□ 2.99
SSBP3-204ENST00000371320 BARGINQ6ZT62 677 aa33.73■■■□□ 2.99
SSBP3-204ENST00000371320 SPC24Q8NBT2 197 aa33.73■■■□□ 2.99
SSBP3-204ENST00000371320 PHLPP1O60346 1717 aa33.72■■■□□ 2.99
SSBP3-204ENST00000371320 STK38Q15208 465 aa33.72■■■□□ 2.99
SSBP3-204ENST00000371320 APOA5Q6Q788 366 aa33.72■■■□□ 2.99
SSBP3-204ENST00000371320 LINC00301Q8NCQ3 95 aa33.72■■■□□ 2.99
SSBP3-204ENST00000371320 GJB4Q9NTQ9 266 aa33.72■■■□□ 2.99
SSBP3-204ENST00000371320 CHRNDQ07001 517 aa33.72■■■□□ 2.99
SSBP3-204ENST00000371320 SF3A1Q15459 793 aaKnown RBP33.72■■■□□ 2.99
SSBP3-204ENST00000371320 ADALQ6DHV7 355 aa33.72■■■□□ 2.99
SSBP3-204ENST00000371320 RGS22Q8NE09 1264 aa33.72■■■□□ 2.99
SSBP3-204ENST00000371320 IGDCC4Q8TDY8 1250 aa33.72■■■□□ 2.99
SSBP3-204ENST00000371320 CLIC4Q9Y696 253 aa33.72■■■□□ 2.99
SSBP3-204ENST00000371320 MYH14Q7Z406 1995 aaKnown RBP33.71■■■□□ 2.99
SSBP3-204ENST00000371320 MYSM1Q5VVJ2 828 aa33.71■■■□□ 2.99
SSBP3-204ENST00000371320 CPLX2Q6PUV4 134 aaKnown RBP33.71■■■□□ 2.99
SSBP3-204ENST00000371320 MRPS27Q92552 414 aaKnown RBP33.71■■■□□ 2.99
SSBP3-204ENST00000371320 POLR3EQ9NVU0 708 aa33.71■■■□□ 2.99
SSBP3-204ENST00000371320 PIP4K2BP78356 416 aa33.7■■■□□ 2.99
SSBP3-204ENST00000371320 NFXL1Q6ZNB6 911 aa33.7■■■□□ 2.99
SSBP3-204ENST00000371320 KCNG4Q8TDN1 519 aa33.7■■■□□ 2.99
SSBP3-204ENST00000371320 KCNQ2O43526 872 aa33.7■■■□□ 2.98
SSBP3-204ENST00000371320 YEATS4O95619 227 aa33.7■■■□□ 2.98
SSBP3-204ENST00000371320 TMEM67Q5HYA8 995 aa33.7■■■□□ 2.98
SSBP3-204ENST00000371320 SENP2Q9HC62 589 aa33.7■■■□□ 2.98
SSBP3-204ENST00000371320 INCENPQ9NQS7 918 aa33.7■■■□□ 2.98
SSBP3-204ENST00000371320 A0A1W2PQ27 194 aa33.69■■■□□ 2.98
SSBP3-204ENST00000371320 A0A1W2PQ64 194 aa33.69■■■□□ 2.98
SSBP3-204ENST00000371320 A0A1W2PQD8 194 aa33.69■■■□□ 2.98
SSBP3-204ENST00000371320 ZBTB43O43298 467 aa33.69■■■□□ 2.98
SSBP3-204ENST00000371320 RXRAP19793 462 aa33.69■■■□□ 2.98
SSBP3-204ENST00000371320 KIF23Q02241 960 aaPredicted RBP33.69■■■□□ 2.98
SSBP3-204ENST00000371320 CTDSPL2Q05D32 466 aa33.69■■■□□ 2.98
SSBP3-204ENST00000371320 SYNE3Q6ZMZ3 975 aa33.69■■■□□ 2.98
SSBP3-204ENST00000371320 C4AP0C0L4 1744 aa33.69■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms