RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 GPR101Q96P66 508 aaPredicted RBP6.03□□□□□ -1.44
UBE3D-202ENST00000369746 CENPOQ9BU64 300 aa6.03□□□□□ -1.44
UBE3D-202ENST00000369746 RGPD2P0DJD1 1756 aa6.03□□□□□ -1.44
UBE3D-202ENST00000369746 SOS1Q07889 1333 aaPredicted RBP6.02□□□□□ -1.45
UBE3D-202ENST00000369746 UQCRHLA0A096LP55 91 aa6.02□□□□□ -1.45
UBE3D-202ENST00000369746 HIP1RO75146 1068 aa6.02□□□□□ -1.45
UBE3D-202ENST00000369746 UQCRHP07919 91 aa6.02□□□□□ -1.45
UBE3D-202ENST00000369746 VDRP11473 427 aa6.02□□□□□ -1.45
UBE3D-202ENST00000369746 ABL2P42684 1182 aa6.02□□□□□ -1.45
UBE3D-202ENST00000369746 PRMT2P55345 433 aa6.02□□□□□ -1.45
UBE3D-202ENST00000369746 RASSF7Q02833 373 aa6.02□□□□□ -1.45
UBE3D-202ENST00000369746 PSMD2Q13200 908 aa6.02□□□□□ -1.45
UBE3D-202ENST00000369746 ARHGEF6Q15052 776 aa6.02□□□□□ -1.45
UBE3D-202ENST00000369746 AMOTQ4VCS5 1084 aa6.02□□□□□ -1.45
UBE3D-202ENST00000369746 CCDC93Q567U6 631 aa6.02□□□□□ -1.45
UBE3D-202ENST00000369746 PRIMPOLQ96LW4 560 aa6.02□□□□□ -1.45
UBE3D-202ENST00000369746 AGBL1Q96MI9 1066 aa6.02□□□□□ -1.45
UBE3D-202ENST00000369746 CEP63Q96MT8 703 aa6.02□□□□□ -1.45
UBE3D-202ENST00000369746 FAM210AQ96ND0 272 aa6.02□□□□□ -1.45
UBE3D-202ENST00000369746 GRPEL1Q9HAV7 217 aa6.02□□□□□ -1.45
UBE3D-202ENST00000369746 CABP1Q9NZU7 370 aa6.02□□□□□ -1.45
UBE3D-202ENST00000369746 SLC45A1Q9Y2W3 748 aa6.02□□□□□ -1.45
UBE3D-202ENST00000369746 MRPL42Q9Y6G3 142 aaKnown RBP6.02□□□□□ -1.45
UBE3D-202ENST00000369746 LDHAP00338 332 aaKnown RBP6.02□□□□□ -1.45
UBE3D-202ENST00000369746 S100BP04271 92 aaPredicted RBP6.02□□□□□ -1.45
UBE3D-202ENST00000369746 EPHX2P34913 555 aa6.02□□□□□ -1.45
UBE3D-202ENST00000369746 KCTD2Q14681 263 aa6.02□□□□□ -1.45
UBE3D-202ENST00000369746 LARP1BQ659C4 914 aaKnown RBP6.02□□□□□ -1.45
UBE3D-202ENST00000369746 IFNL2Q8IZJ0 200 aa6.02□□□□□ -1.45
UBE3D-202ENST00000369746 CNTROBQ8N137 903 aa6.02□□□□□ -1.45
UBE3D-202ENST00000369746 ARMC5Q96C12 935 aa6.02□□□□□ -1.45
UBE3D-202ENST00000369746 TEX13AQ9BXU3 409 aaPredicted RBP6.02□□□□□ -1.45
UBE3D-202ENST00000369746 PCDH12Q9NPG4 1184 aa6.02□□□□□ -1.45
UBE3D-202ENST00000369746 SMC4Q9NTJ3 1288 aa6.02□□□□□ -1.45
UBE3D-202ENST00000369746 CGNQ9P2M7 1197 aaKnown RBP6.02□□□□□ -1.45
UBE3D-202ENST00000369746 ANAPC4Q9UJX5 808 aa6.02□□□□□ -1.45
UBE3D-202ENST00000369746 TBC1D2BQ9UPU7 963 aa6.02□□□□□ -1.45
UBE3D-202ENST00000369746 SCINQ9Y6U3 715 aa6.02□□□□□ -1.45
UBE3D-202ENST00000369746 CARMIL3Q8ND23 1372 aa6.01□□□□□ -1.45
UBE3D-202ENST00000369746 A0A0G2JLW4 131 aa6.01□□□□□ -1.45
UBE3D-202ENST00000369746 DLL1O00548 723 aa6.01□□□□□ -1.45
UBE3D-202ENST00000369746 PPP1R12AO14974 1030 aaPredicted RBP6.01□□□□□ -1.45
UBE3D-202ENST00000369746 ALDH1A1P00352 501 aa6.01□□□□□ -1.45
UBE3D-202ENST00000369746 NEFHP12036 1026 aa6.01□□□□□ -1.45
UBE3D-202ENST00000369746 TOMM20Q15388 145 aa6.01□□□□□ -1.45
UBE3D-202ENST00000369746 SYCP2LQ5T4T6 812 aa6.01□□□□□ -1.45
UBE3D-202ENST00000369746 C10orf62Q5T681 223 aaPredicted RBP6.01□□□□□ -1.45
UBE3D-202ENST00000369746 C16orf87Q6PH81 154 aa6.01□□□□□ -1.45
UBE3D-202ENST00000369746 PDCL2Q8N4E4 241 aa6.01□□□□□ -1.45
UBE3D-202ENST00000369746 PAIP2Q9BPZ3 127 aaKnown RBP6.01□□□□□ -1.45
UBE3D-202ENST00000369746 C22orf23Q9BZE7 217 aa6.01□□□□□ -1.45
UBE3D-202ENST00000369746 ALDH8A1Q9H2A2 487 aaPredicted RBP6.01□□□□□ -1.45
UBE3D-202ENST00000369746 RANBP17Q9H2T7 1088 aaKnown RBP6.01□□□□□ -1.45
UBE3D-202ENST00000369746 TTF2Q9UNY4 1162 aaKnown RBP6.01□□□□□ -1.45
UBE3D-202ENST00000369746 USTQ9Y2C2 406 aa6.01□□□□□ -1.45
UBE3D-202ENST00000369746 GJA3Q9Y6H8 435 aa6.01□□□□□ -1.45
UBE3D-202ENST00000369746 GNPATO15228 680 aa6.01□□□□□ -1.45
UBE3D-202ENST00000369746 PAX7P23759 505 aa6.01□□□□□ -1.45
UBE3D-202ENST00000369746 MSNP26038 577 aaKnown RBP6.01□□□□□ -1.45
UBE3D-202ENST00000369746 PRO3102Q9H379 93 aa6.01□□□□□ -1.45
UBE3D-202ENST00000369746 ZSWIM4Q9H7M6 989 aa6.01□□□□□ -1.45
UBE3D-202ENST00000369746 VRTNQ9H8Y1 702 aa6.01□□□□□ -1.45
UBE3D-202ENST00000369746 IFT57Q9NWB7 429 aa6.01□□□□□ -1.45
UBE3D-202ENST00000369746 TMOD3Q9NYL9 352 aa6.01□□□□□ -1.45
UBE3D-202ENST00000369746 DONSONQ9NYP3 566 aa6.01□□□□□ -1.45
UBE3D-202ENST00000369746 RAB3GAP2Q9H2M9 1393 aa6□□□□□ -1.45
UBE3D-202ENST00000369746 CBFA2T2O43439 604 aa6□□□□□ -1.45
UBE3D-202ENST00000369746 COQ9O75208 318 aa6□□□□□ -1.45
UBE3D-202ENST00000369746 GNRH1P01148 92 aa6□□□□□ -1.45
UBE3D-202ENST00000369746 IBSPP21815 317 aaPredicted RBP6□□□□□ -1.45
UBE3D-202ENST00000369746 BMP8BP34820 402 aa6□□□□□ -1.45
UBE3D-202ENST00000369746 MLLT3P42568 568 aaPredicted RBP6□□□□□ -1.45
UBE3D-202ENST00000369746 MECOMQ03112 1051 aa6□□□□□ -1.45
UBE3D-202ENST00000369746 FMR1Q06787 632 aaKnown RBP eCLIP6□□□□□ -1.45
UBE3D-202ENST00000369746 FILIP1Q7Z7B0 1213 aa6□□□□□ -1.45
UBE3D-202ENST00000369746 C7orf43Q8WVR3 580 aa6□□□□□ -1.45
UBE3D-202ENST00000369746 CCDC47Q96A33 483 aaKnown RBP6□□□□□ -1.45
UBE3D-202ENST00000369746 TRIM34Q9BYJ4 488 aa6□□□□□ -1.45
UBE3D-202ENST00000369746 ZHX3Q9H4I2 956 aa6□□□□□ -1.45
UBE3D-202ENST00000369746 SNRKQ9NRH2 765 aa6□□□□□ -1.45
UBE3D-202ENST00000369746 KNSTRNQ9Y448 316 aa6□□□□□ -1.45
UBE3D-202ENST00000369746 LRRC37AA6NMS7 1700 aa6□□□□□ -1.45
UBE3D-202ENST00000369746 PRSS47A8MTI9 375 aa6□□□□□ -1.45
UBE3D-202ENST00000369746 TRDNQ13061 729 aa6□□□□□ -1.45
UBE3D-202ENST00000369746 ALDH1L2Q3SY69 923 aa6□□□□□ -1.45
UBE3D-202ENST00000369746 LMBRD2Q68DH5 695 aaPredicted RBP6□□□□□ -1.45
UBE3D-202ENST00000369746 TMC4Q7Z404 712 aa6□□□□□ -1.45
UBE3D-202ENST00000369746 SUGP1Q8IWZ8 645 aaKnown RBP6□□□□□ -1.45
UBE3D-202ENST00000369746 SUPT20HQ8NEM7 779 aa6□□□□□ -1.45
UBE3D-202ENST00000369746 PIGBQ92521 554 aa6□□□□□ -1.45
UBE3D-202ENST00000369746 SYMPKQ92797 1274 aaKnown RBP6□□□□□ -1.45
UBE3D-202ENST00000369746 MASTLQ96GX5 879 aa6□□□□□ -1.45
UBE3D-202ENST00000369746 MED4Q9NPJ6 270 aa6□□□□□ -1.45
UBE3D-202ENST00000369746 IP6K2Q9UHH9 426 aa6□□□□□ -1.45
UBE3D-202ENST00000369746 NOL7Q9UMY1 257 aaKnown RBP6□□□□□ -1.45
UBE3D-202ENST00000369746 NUDCQ9Y266 331 aa6□□□□□ -1.45
UBE3D-202ENST00000369746 C7P10643 843 aa5.99□□□□□ -1.45
UBE3D-202ENST00000369746 KCNJ4P48050 445 aa5.99□□□□□ -1.45
UBE3D-202ENST00000369746 INHBEP58166 350 aa5.99□□□□□ -1.45
UBE3D-202ENST00000369746 ZBED6P86452 979 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms