RNA–Protein interactions for RNA: ENST00000369509.1

VANGL1-203, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-203ENST00000369509 CPA1P15085 419 aa13.22□□□□□ -0.29
VANGL1-203ENST00000369509 MCM2P49736 904 aa13.22□□□□□ -0.29
VANGL1-203ENST00000369509 STOX1Q6ZVD7 989 aa13.22□□□□□ -0.29
VANGL1-203ENST00000369509 RUFY3Q7L099 469 aa13.22□□□□□ -0.29
VANGL1-203ENST00000369509 UPF1Q92900 1129 aaKnown RBP eCLIP13.22□□□□□ -0.29
VANGL1-203ENST00000369509 CD209Q9NNX6 404 aa13.22□□□□□ -0.29
VANGL1-203ENST00000369509 ZMYM6O95789 1325 aa13.22□□□□□ -0.29
VANGL1-203ENST00000369509 SCN9AQ15858 1988 aa13.22□□□□□ -0.29
VANGL1-203ENST00000369509 MBD4O95243 580 aa13.22□□□□□ -0.29
VANGL1-203ENST00000369509 FGAP02671 866 aa13.22□□□□□ -0.29
VANGL1-203ENST00000369509 PTMSP20962 102 aa13.22□□□□□ -0.29
VANGL1-203ENST00000369509 PRDX5P30044 214 aa13.22□□□□□ -0.29
VANGL1-203ENST00000369509 CHAF1AQ13111 956 aaPredicted RBP13.22□□□□□ -0.29
VANGL1-203ENST00000369509 TTLL5Q6EMB2 1281 aa13.22□□□□□ -0.29
VANGL1-203ENST00000369509 AIDAQ96BJ3 306 aa13.22□□□□□ -0.29
VANGL1-203ENST00000369509 NSUN4Q96CB9 384 aaKnown RBP13.22□□□□□ -0.29
VANGL1-203ENST00000369509 RAI14Q9P0K7 980 aa13.22□□□□□ -0.29
VANGL1-203ENST00000369509 PSME4Q14997 1843 aa13.21□□□□□ -0.29
VANGL1-203ENST00000369509 KRT32Q14532 448 aa13.21□□□□□ -0.29
VANGL1-203ENST00000369509 LCORLQ8N3X6 602 aa13.21□□□□□ -0.29
VANGL1-203ENST00000369509 MPNDQ8N594 471 aa13.21□□□□□ -0.29
VANGL1-203ENST00000369509 C7orf43Q8WVR3 580 aa13.21□□□□□ -0.29
VANGL1-203ENST00000369509 CYP46A1Q9Y6A2 500 aa13.21□□□□□ -0.29
VANGL1-203ENST00000369509 C6orf229H3BNL8 230 aa13.2□□□□□ -0.3
VANGL1-203ENST00000369509 CYP7A1P22680 504 aa13.2□□□□□ -0.3
VANGL1-203ENST00000369509 PSMA5P28066 241 aa13.2□□□□□ -0.3
VANGL1-203ENST00000369509 AK2P54819 239 aa13.2□□□□□ -0.3
VANGL1-203ENST00000369509 MECOMQ03112 1051 aa13.2□□□□□ -0.3
VANGL1-203ENST00000369509 WDR66Q8TBY9 1149 aa13.2□□□□□ -0.3
VANGL1-203ENST00000369509 CNKSR1Q969H4 720 aa13.2□□□□□ -0.3
VANGL1-203ENST00000369509 TMX3Q96JJ7 454 aa13.2□□□□□ -0.3
VANGL1-203ENST00000369509 GBP4Q96PP9 640 aa13.2□□□□□ -0.3
VANGL1-203ENST00000369509 RIOK1Q9BRS2 568 aaKnown RBP13.2□□□□□ -0.3
VANGL1-203ENST00000369509 ARMT1Q9H993 441 aa13.2□□□□□ -0.3
VANGL1-203ENST00000369509 EPB41L4AQ9HCS5 686 aaPredicted RBP13.2□□□□□ -0.3
VANGL1-203ENST00000369509 JAG2Q9Y219 1238 aa13.2□□□□□ -0.3
VANGL1-203ENST00000369509 FOCADQ5VW36 1801 aa13.2□□□□□ -0.3
VANGL1-203ENST00000369509 IGSF3O75054 1194 aa13.2□□□□□ -0.3
VANGL1-203ENST00000369509 RPS6KB1P23443 525 aa13.2□□□□□ -0.3
VANGL1-203ENST00000369509 TMED8Q6PL24 325 aaPredicted RBP13.2□□□□□ -0.3
VANGL1-203ENST00000369509 DPP8Q6V1X1 898 aaPredicted RBP13.2□□□□□ -0.3
VANGL1-203ENST00000369509 CTNNA3Q9UI47 895 aa13.2□□□□□ -0.3
VANGL1-203ENST00000369509 BRPF3Q9ULD4 1205 aa13.2□□□□□ -0.3
VANGL1-203ENST00000369509 CUL4AQ13619 759 aa13.19□□□□□ -0.3
VANGL1-203ENST00000369509 ALX1Q15699 326 aa13.19□□□□□ -0.3
VANGL1-203ENST00000369509 NAA16Q6N069 864 aaPredicted RBP13.19□□□□□ -0.3
VANGL1-203ENST00000369509 BLOC1S2Q6QNY1 142 aa13.19□□□□□ -0.3
VANGL1-203ENST00000369509 ZGPATQ8N5A5 531 aaKnown RBP13.19□□□□□ -0.3
VANGL1-203ENST00000369509 MIGA1Q8NAN2 632 aa13.19□□□□□ -0.3
VANGL1-203ENST00000369509 ALDH8A1Q9H2A2 487 aaPredicted RBP13.19□□□□□ -0.3
VANGL1-203ENST00000369509 NAV1Q8NEY1 1877 aa13.19□□□□□ -0.3
VANGL1-203ENST00000369509 GSG1L2A8MUP6 293 aa13.19□□□□□ -0.3
VANGL1-203ENST00000369509 E7EWF7 191 aa13.19□□□□□ -0.3
VANGL1-203ENST00000369509 ZBTB7AO95365 584 aa13.19□□□□□ -0.3
VANGL1-203ENST00000369509 KCNA3P22001 575 aa13.19□□□□□ -0.3
VANGL1-203ENST00000369509 GRIK5Q16478 980 aa13.19□□□□□ -0.3
VANGL1-203ENST00000369509 NEK1Q96PY6 1258 aa13.19□□□□□ -0.3
VANGL1-203ENST00000369509 RTFDC1Q9BY42 306 aaPredicted RBP13.19□□□□□ -0.3
VANGL1-203ENST00000369509 MTFR1LQ9H019 292 aa13.19□□□□□ -0.3
VANGL1-203ENST00000369509 NBPF3Q9H094 633 aa13.19□□□□□ -0.3
VANGL1-203ENST00000369509 PDRG1Q9NUG6 133 aa13.19□□□□□ -0.3
VANGL1-203ENST00000369509 FAM205AQ6ZU69 1335 aa13.19□□□□□ -0.3
VANGL1-203ENST00000369509 DDX60LQ5H9U9 1706 aaKnown RBP13.18□□□□□ -0.3
VANGL1-203ENST00000369509 PATL2C9JE40 543 aaKnown RBP13.18□□□□□ -0.3
VANGL1-203ENST00000369509 TRAK2O60296 914 aa13.18□□□□□ -0.3
VANGL1-203ENST00000369509 GNAT2P19087 354 aa13.18□□□□□ -0.3
VANGL1-203ENST00000369509 IMMTQ16891 758 aaKnown RBP13.18□□□□□ -0.3
VANGL1-203ENST00000369509 SPTY2D1Q68D10 685 aaPredicted RBP13.18□□□□□ -0.3
VANGL1-203ENST00000369509 COA1Q9GZY4 146 aa13.18□□□□□ -0.3
VANGL1-203ENST00000369509 ADAMTSL1Q8N6G6 1762 aa13.18□□□□□ -0.3
VANGL1-203ENST00000369509 MAGEB6P1A0A0J9YX57 407 aa13.17□□□□□ -0.3
VANGL1-203ENST00000369509 PRKAB2O43741 272 aa13.17□□□□□ -0.3
VANGL1-203ENST00000369509 NOL8Q76FK4 1167 aaKnown RBP13.17□□□□□ -0.3
VANGL1-203ENST00000369509 IFNL3Q8IZI9 196 aa13.17□□□□□ -0.3
VANGL1-203ENST00000369509 FER1L6Q2WGJ9 1857 aa13.17□□□□□ -0.3
VANGL1-203ENST00000369509 GOLGA6L3A6NEY3 463 aa13.17□□□□□ -0.3
VANGL1-203ENST00000369509 RIMBP2O15034 1052 aa13.17□□□□□ -0.3
VANGL1-203ENST00000369509 HAND2P61296 217 aa13.17□□□□□ -0.3
VANGL1-203ENST00000369509 TOB2Q14106 344 aaPredicted RBP13.17□□□□□ -0.3
VANGL1-203ENST00000369509 R3HDM1Q15032 1099 aaKnown RBP13.17□□□□□ -0.3
VANGL1-203ENST00000369509 RAB3GAP1Q15042 981 aa13.17□□□□□ -0.3
VANGL1-203ENST00000369509 TCEANC2Q96MN5 208 aa13.17□□□□□ -0.3
VANGL1-203ENST00000369509 SGIP1Q9BQI5 828 aa13.17□□□□□ -0.3
VANGL1-203ENST00000369509 ZC3H12CQ9C0D7 883 aaKnown RBP13.17□□□□□ -0.3
VANGL1-203ENST00000369509 TMX4Q9H1E5 349 aaPredicted RBP13.17□□□□□ -0.3
VANGL1-203ENST00000369509 LDHBP07195 334 aaKnown RBP13.16□□□□□ -0.3
VANGL1-203ENST00000369509 DYNLL1P63167 89 aaKnown RBP13.16□□□□□ -0.3
VANGL1-203ENST00000369509 FOXD4L1Q9NU39 408 aa13.16□□□□□ -0.3
VANGL1-203ENST00000369509 LIMCH1Q9UPQ0 1083 aa13.16□□□□□ -0.3
VANGL1-203ENST00000369509 SLC4A4Q9Y6R1 1079 aa13.16□□□□□ -0.3
VANGL1-203ENST00000369509 ECM29Q5VYK3 1845 aa13.16□□□□□ -0.3
VANGL1-203ENST00000369509 ZNF213O14771 459 aa13.16□□□□□ -0.3
VANGL1-203ENST00000369509 LARGE1O95461 756 aa13.16□□□□□ -0.3
VANGL1-203ENST00000369509 APPP05067 770 aa13.16□□□□□ -0.3
VANGL1-203ENST00000369509 HMGB1P09429 215 aaKnown RBP13.16□□□□□ -0.3
VANGL1-203ENST00000369509 DPEP1P16444 411 aa13.16□□□□□ -0.3
VANGL1-203ENST00000369509 EXOSC10Q01780 885 aaKnown RBP13.16□□□□□ -0.3
VANGL1-203ENST00000369509 CC2D2BQ6DHV5 1058 aa13.16□□□□□ -0.3
VANGL1-203ENST00000369509 DZIP1Q86YF9 867 aaKnown RBP13.16□□□□□ -0.3
VANGL1-203ENST00000369509 TBC1D10CQ8IV04 446 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms