RNA–Protein interactions for RNA: ENST00000369454.3

RAB39B-201, Transcript of RAB39B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39B, Length 3,505 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39B-201ENST00000369454 PRKAB2O43741 272 aa13.43□□□□□ -0.26
RAB39B-201ENST00000369454 BCAMP50895 628 aa13.43□□□□□ -0.26
RAB39B-201ENST00000369454 NDUFA8P51970 172 aa13.43□□□□□ -0.26
RAB39B-201ENST00000369454 SNW1Q13573 536 aaKnown RBP13.43□□□□□ -0.26
RAB39B-201ENST00000369454 ARID5BQ14865 1188 aa13.43□□□□□ -0.26
RAB39B-201ENST00000369454 FILIP1Q7Z7B0 1213 aa13.43□□□□□ -0.26
RAB39B-201ENST00000369454 CMTR1Q8N1G2 835 aaKnown RBP13.43□□□□□ -0.26
RAB39B-201ENST00000369454 CLIP2Q9UDT6 1046 aa13.43□□□□□ -0.26
RAB39B-201ENST00000369454 LAMA4Q16363 1823 aa13.43□□□□□ -0.26
RAB39B-201ENST00000369454 NUP188Q5SRE5 1749 aa13.42□□□□□ -0.26
RAB39B-201ENST00000369454 MBD4O95243 580 aa13.42□□□□□ -0.26
RAB39B-201ENST00000369454 METAP2P50579 478 aaKnown RBP eCLIP13.42□□□□□ -0.26
RAB39B-201ENST00000369454 PLA2G12BQ9BX93 195 aa13.42□□□□□ -0.26
RAB39B-201ENST00000369454 BICDL1Q6ZP65 573 aa13.42□□□□□ -0.26
RAB39B-201ENST00000369454 DHX16O60231 1041 aaKnown RBP13.42□□□□□ -0.26
RAB39B-201ENST00000369454 ZNF75DP51815 510 aa13.42□□□□□ -0.26
RAB39B-201ENST00000369454 RASGRF1Q13972 1273 aa13.42□□□□□ -0.26
RAB39B-201ENST00000369454 ZRSR1Q15695 479 aaKnown RBP13.42□□□□□ -0.26
RAB39B-201ENST00000369454 FBXO18Q8NFZ0 1043 aa13.42□□□□□ -0.26
RAB39B-201ENST00000369454 ABCF2Q9UG63 623 aa13.42□□□□□ -0.26
RAB39B-201ENST00000369454 XIRP1Q702N8 1843 aaKnown RBP13.41□□□□□ -0.26
RAB39B-201ENST00000369454 RRP9O43818 475 aaKnown RBP13.41□□□□□ -0.26
RAB39B-201ENST00000369454 VGLL2Q8N8G2 317 aa13.41□□□□□ -0.26
RAB39B-201ENST00000369454 ALG1Q9BT22 464 aa13.41□□□□□ -0.26
RAB39B-201ENST00000369454 NEDD4P46934 1319 aa13.41□□□□□ -0.26
RAB39B-201ENST00000369454 ABCC6O95255 1503 aa13.41□□□□□ -0.26
RAB39B-201ENST00000369454 CDC27P30260 824 aa13.41□□□□□ -0.26
RAB39B-201ENST00000369454 FAM160A1Q05DH4 1040 aa13.41□□□□□ -0.26
RAB39B-201ENST00000369454 ZSCAN25Q6NSZ9 544 aa13.41□□□□□ -0.26
RAB39B-201ENST00000369454 AOPEPQ8N6M6 819 aa13.41□□□□□ -0.26
RAB39B-201ENST00000369454 SPATA5Q8NB90 893 aa13.41□□□□□ -0.26
RAB39B-201ENST00000369454 KIAA1524Q8TCG1 905 aa13.41□□□□□ -0.26
RAB39B-201ENST00000369454 C16orf45Q96MC5 204 aaPredicted RBP13.41□□□□□ -0.26
RAB39B-201ENST00000369454 NAPBQ9H115 298 aa13.41□□□□□ -0.26
RAB39B-201ENST00000369454 ANGEL1Q9UNK9 670 aaKnown RBP13.41□□□□□ -0.26
RAB39B-201ENST00000369454 PUM3Q15397 648 aaKnown RBP13.4□□□□□ -0.26
RAB39B-201ENST00000369454 CCDC144BQ3MJ40 725 aa13.4□□□□□ -0.26
RAB39B-201ENST00000369454 MRPS27Q92552 414 aaKnown RBP13.4□□□□□ -0.26
RAB39B-201ENST00000369454 FBXO3Q9UK99 471 aa13.4□□□□□ -0.26
RAB39B-201ENST00000369454 NIP7Q9Y221 180 aaKnown RBP eCLIP13.4□□□□□ -0.26
RAB39B-201ENST00000369454 ATP2B1P20020 1258 aa13.4□□□□□ -0.26
RAB39B-201ENST00000369454 TMEM67Q5HYA8 995 aa13.4□□□□□ -0.26
RAB39B-201ENST00000369454 MYSM1Q5VVJ2 828 aa13.4□□□□□ -0.26
RAB39B-201ENST00000369454 TOGARAM1Q9Y4F4 1720 aa13.4□□□□□ -0.26
RAB39B-201ENST00000369454 SPTLC2O15270 562 aa13.4□□□□□ -0.26
RAB39B-201ENST00000369454 PRKCSHP14314 528 aaPredicted RBP13.4□□□□□ -0.26
RAB39B-201ENST00000369454 STX1AQ16623 288 aa13.4□□□□□ -0.26
RAB39B-201ENST00000369454 RBM43Q6ZSC3 357 aaKnown RBP13.4□□□□□ -0.26
RAB39B-201ENST00000369454 LINC00301Q8NCQ3 95 aa13.4□□□□□ -0.26
RAB39B-201ENST00000369454 CDHR2Q9BYE9 1310 aa13.4□□□□□ -0.26
RAB39B-201ENST00000369454 UBR2Q8IWV8 1755 aa13.4□□□□□ -0.26
RAB39B-201ENST00000369454 IFIT3O14879 490 aaKnown RBP13.39□□□□□ -0.27
RAB39B-201ENST00000369454 CRKLP46109 303 aaKnown RBP13.39□□□□□ -0.27
RAB39B-201ENST00000369454 TDO2P48775 406 aa13.39□□□□□ -0.27
RAB39B-201ENST00000369454 TTF1Q15361 905 aaPredicted RBP13.39□□□□□ -0.27
RAB39B-201ENST00000369454 CCDC24Q8N4L8 307 aa13.39□□□□□ -0.27
RAB39B-201ENST00000369454 LPIN2Q92539 896 aa13.39□□□□□ -0.27
RAB39B-201ENST00000369454 LRP2BPQ9P2M1 347 aa13.39□□□□□ -0.27
RAB39B-201ENST00000369454 KDM4FA0A1W2PPD8 638 aa13.39□□□□□ -0.27
RAB39B-201ENST00000369454 SMIM22K7EJ46 135 aa13.39□□□□□ -0.27
RAB39B-201ENST00000369454 TDRD7Q8NHU6 1098 aaKnown RBP13.39□□□□□ -0.27
RAB39B-201ENST00000369454 BCL9O00512 1426 aa13.39□□□□□ -0.27
RAB39B-201ENST00000369454 SLC5A1P13866 664 aa13.39□□□□□ -0.27
RAB39B-201ENST00000369454 DDB1Q16531 1140 aa13.39□□□□□ -0.27
RAB39B-201ENST00000369454 SPECC1Q5M775 1068 aa13.39□□□□□ -0.27
RAB39B-201ENST00000369454 ENGASEQ8NFI3 743 aa13.39□□□□□ -0.27
RAB39B-201ENST00000369454 ZNF592Q92610 1267 aa13.39□□□□□ -0.27
RAB39B-201ENST00000369454 STRBPQ96SI9 672 aaKnown RBP13.39□□□□□ -0.27
RAB39B-201ENST00000369454 SLC26A6Q9BXS9 759 aa13.39□□□□□ -0.27
RAB39B-201ENST00000369454 GOLGA8AA7E2F4 631 aa13.38□□□□□ -0.27
RAB39B-201ENST00000369454 MINDY4BA8MYZ0 360 aa13.38□□□□□ -0.27
RAB39B-201ENST00000369454 APOA5Q6Q788 366 aa13.38□□□□□ -0.27
RAB39B-201ENST00000369454 CACTINQ8WUQ7 758 aaKnown RBP13.38□□□□□ -0.27
RAB39B-201ENST00000369454 CHMP4CQ96CF2 233 aa13.38□□□□□ -0.27
RAB39B-201ENST00000369454 EPB41L4AQ9HCS5 686 aaPredicted RBP13.38□□□□□ -0.27
RAB39B-201ENST00000369454 PLEKHG2Q9H7P9 1386 aa13.38□□□□□ -0.27
RAB39B-201ENST00000369454 ZBTB43O43298 467 aa13.38□□□□□ -0.27
RAB39B-201ENST00000369454 IL6STP40189 918 aaPredicted RBP13.38□□□□□ -0.27
RAB39B-201ENST00000369454 MAP3K12Q12852 859 aa13.38□□□□□ -0.27
RAB39B-201ENST00000369454 IQCB1Q15051 598 aa13.38□□□□□ -0.27
RAB39B-201ENST00000369454 DPCR1Q3MIW9 517 aa13.38□□□□□ -0.27
RAB39B-201ENST00000369454 IFNL3Q8IZI9 196 aa13.38□□□□□ -0.27
RAB39B-201ENST00000369454 NUP133Q8WUM0 1156 aa13.38□□□□□ -0.27
RAB39B-201ENST00000369454 ZSWIM5Q9P217 1185 aa13.38□□□□□ -0.27
RAB39B-201ENST00000369454 KCNQ2O43526 872 aa13.38□□□□□ -0.27
RAB39B-201ENST00000369454 KIF23Q02241 960 aaPredicted RBP13.38□□□□□ -0.27
RAB39B-201ENST00000369454 KRT40Q6A162 431 aa13.38□□□□□ -0.27
RAB39B-201ENST00000369454 VPS37DQ86XT2 251 aa13.38□□□□□ -0.27
RAB39B-201ENST00000369454 LCORLQ8N3X6 602 aa13.38□□□□□ -0.27
RAB39B-201ENST00000369454 CLIC6Q96NY7 704 aa13.38□□□□□ -0.27
RAB39B-201ENST00000369454 UTP14AQ9BVJ6 771 aaKnown RBP13.38□□□□□ -0.27
RAB39B-201ENST00000369454 RTEL1Q9NZ71 1219 aa13.38□□□□□ -0.27
RAB39B-201ENST00000369454 SLC4A4Q9Y6R1 1079 aa13.38□□□□□ -0.27
RAB39B-201ENST00000369454 ADALQ6DHV7 355 aa13.37□□□□□ -0.27
RAB39B-201ENST00000369454 PLA2G4DQ86XP0 818 aa13.37□□□□□ -0.27
RAB39B-201ENST00000369454 ZNF34Q8IZ26 560 aa13.37□□□□□ -0.27
RAB39B-201ENST00000369454 FMR1NBQ8N0W7 255 aaPredicted RBP13.37□□□□□ -0.27
RAB39B-201ENST00000369454 SDR42E1Q8WUS8 393 aa13.37□□□□□ -0.27
RAB39B-201ENST00000369454 SH2B2O14492 632 aaPredicted RBP13.37□□□□□ -0.27
RAB39B-201ENST00000369454 UBE3CQ15386 1083 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms