RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 ADGRA1Q86SQ6 560 aa28.56■■■□□ 2.16
SNX3-203ENST00000368979 STRBPQ96SI9 672 aaKnown RBP28.56■■■□□ 2.16
SNX3-203ENST00000368979 FAM205AQ6ZU69 1335 aa28.55■■■□□ 2.16
SNX3-203ENST00000368979 MBD4O95243 580 aa28.55■■■□□ 2.16
SNX3-203ENST00000368979 MECOMQ03112 1051 aa28.55■■■□□ 2.16
SNX3-203ENST00000368979 GRIPAP1Q4V328 841 aa28.55■■■□□ 2.16
SNX3-203ENST00000368979 NAA16Q6N069 864 aaPredicted RBP28.55■■■□□ 2.16
SNX3-203ENST00000368979 IL27Q8NEV9 243 aa28.55■■■□□ 2.16
SNX3-203ENST00000368979 DAXXQ9UER7 740 aaPredicted RBP28.55■■■□□ 2.16
SNX3-203ENST00000368979 RPAP1Q9BWH6 1393 aaPredicted RBP28.55■■■□□ 2.16
SNX3-203ENST00000368979 C21orf2O43822 256 aa28.54■■■□□ 2.16
SNX3-203ENST00000368979 CHD4Q14839 1912 aa28.54■■■□□ 2.16
SNX3-203ENST00000368979 ST18O60284 1047 aa28.53■■■□□ 2.16
SNX3-203ENST00000368979 CYP21A2P08686 494 aa28.53■■■□□ 2.16
SNX3-203ENST00000368979 TM6SF1Q9BZW5 370 aa28.53■■■□□ 2.16
SNX3-203ENST00000368979 NEK4P51957 841 aa28.53■■■□□ 2.16
SNX3-203ENST00000368979 ADCK5Q3MIX3 580 aa28.53■■■□□ 2.16
SNX3-203ENST00000368979 CCDC93Q567U6 631 aa28.53■■■□□ 2.16
SNX3-203ENST00000368979 CD2APQ9Y5K6 639 aa28.53■■■□□ 2.16
SNX3-203ENST00000368979 TAF6LQ9Y6J9 622 aa28.53■■■□□ 2.16
SNX3-203ENST00000368979 LDHBP07195 334 aaKnown RBP28.52■■■□□ 2.16
SNX3-203ENST00000368979 LCORLQ8N3X6 602 aa28.52■■■□□ 2.16
SNX3-203ENST00000368979 SUPT20HQ8NEM7 779 aa28.52■■■□□ 2.16
SNX3-203ENST00000368979 ARMT1Q9H993 441 aa28.52■■■□□ 2.16
SNX3-203ENST00000368979 MIGA1Q8NAN2 632 aa28.51■■■□□ 2.15
SNX3-203ENST00000368979 TBC1D22AQ8WUA7 517 aa28.51■■■□□ 2.15
SNX3-203ENST00000368979 RIOK1Q9BRS2 568 aaKnown RBP28.51■■■□□ 2.15
SNX3-203ENST00000368979 UPF3BQ9BZI7 483 aaKnown RBP28.51■■■□□ 2.15
SNX3-203ENST00000368979 PIM2Q9P1W9 311 aa28.51■■■□□ 2.15
SNX3-203ENST00000368979 CTNNA3Q9UI47 895 aa28.51■■■□□ 2.15
SNX3-203ENST00000368979 FGAP02671 866 aa28.5■■■□□ 2.15
SNX3-203ENST00000368979 GNAT2P19087 354 aa28.5■■■□□ 2.15
SNX3-203ENST00000368979 DOK7Q18PE1 504 aa28.5■■■□□ 2.15
SNX3-203ENST00000368979 DZIP1Q86YF9 867 aaKnown RBP28.5■■■□□ 2.15
SNX3-203ENST00000368979 JAKMIP1Q96N16 626 aaKnown RBP28.5■■■□□ 2.15
SNX3-203ENST00000368979 ZMYM6O95789 1325 aa28.5■■■□□ 2.15
SNX3-203ENST00000368979 MAGEB6P1A0A0J9YX57 407 aa28.49■■■□□ 2.15
SNX3-203ENST00000368979 K7ELQ4 463 aaPredicted RBP28.49■■■□□ 2.15
SNX3-203ENST00000368979 KRT32Q14532 448 aa28.49■■■□□ 2.15
SNX3-203ENST00000368979 GRIK5Q16478 980 aa28.49■■■□□ 2.15
SNX3-203ENST00000368979 RTKN2Q8IZC4 609 aa28.49■■■□□ 2.15
SNX3-203ENST00000368979 ZSWIM6Q9HCJ5 1215 aa28.49■■■□□ 2.15
SNX3-203ENST00000368979 LAMA4Q16363 1823 aa28.49■■■□□ 2.15
SNX3-203ENST00000368979 CASTP20810 708 aaKnown RBP28.48■■■□□ 2.15
SNX3-203ENST00000368979 TTLL5Q6EMB2 1281 aa28.48■■■□□ 2.15
SNX3-203ENST00000368979 ZNF646O15015 1829 aaPredicted RBP28.48■■■□□ 2.15
SNX3-203ENST00000368979 PATL2C9JE40 543 aaKnown RBP28.48■■■□□ 2.15
SNX3-203ENST00000368979 PSMA5P28066 241 aa28.48■■■□□ 2.15
SNX3-203ENST00000368979 GTF2IP78347 998 aa28.48■■■□□ 2.15
SNX3-203ENST00000368979 KIAA2012Q0VF49 1180 aa28.48■■■□□ 2.15
SNX3-203ENST00000368979 ALX1Q15699 326 aa28.48■■■□□ 2.15
SNX3-203ENST00000368979 MFSD14BQ5SR56 506 aa28.48■■■□□ 2.15
SNX3-203ENST00000368979 PODNQ7Z5L7 613 aa28.48■■■□□ 2.15
SNX3-203ENST00000368979 PSMD1Q99460 953 aa28.48■■■□□ 2.15
SNX3-203ENST00000368979 SOGA3Q5TF21 947 aa28.47■■■□□ 2.15
SNX3-203ENST00000368979 TTC14Q96N46 770 aa28.47■■■□□ 2.15
SNX3-203ENST00000368979 EPB41L4AQ9HCS5 686 aaPredicted RBP28.47■■■□□ 2.15
SNX3-203ENST00000368979 G3V3G9 751 aa28.46■■■□□ 2.15
SNX3-203ENST00000368979 GSTO1P78417 241 aa28.46■■■□□ 2.15
SNX3-203ENST00000368979 DCAF8Q5TAQ9 597 aa28.46■■■□□ 2.15
SNX3-203ENST00000368979 DBNDD1Q9H9R9 158 aa28.46■■■□□ 2.15
SNX3-203ENST00000368979 GSG1L2A8MUP6 293 aa28.45■■■□□ 2.15
SNX3-203ENST00000368979 MCM2P49736 904 aa28.45■■■□□ 2.15
SNX3-203ENST00000368979 DYNLL1P63167 89 aaKnown RBP28.45■■■□□ 2.15
SNX3-203ENST00000368979 AOC3Q16853 763 aa28.45■■■□□ 2.15
SNX3-203ENST00000368979 IMMTQ16891 758 aaKnown RBP28.45■■■□□ 2.15
SNX3-203ENST00000368979 RUFY3Q7L099 469 aa28.45■■■□□ 2.15
SNX3-203ENST00000368979 PPP1R1BQ9UD71 204 aaPredicted RBP28.45■■■□□ 2.15
SNX3-203ENST00000368979 SLC4A4Q9Y6R1 1079 aa28.45■■■□□ 2.15
SNX3-203ENST00000368979 PRKAB2O43741 272 aa28.44■■■□□ 2.14
SNX3-203ENST00000368979 APPP05067 770 aa28.44■■■□□ 2.14
SNX3-203ENST00000368979 DALRD3Q5D0E6 543 aaKnown RBP28.44■■■□□ 2.14
SNX3-203ENST00000368979 STOX1Q6ZVD7 989 aa28.44■■■□□ 2.14
SNX3-203ENST00000368979 IFNL3Q8IZI9 196 aa28.44■■■□□ 2.14
SNX3-203ENST00000368979 SUGT1Q9Y2Z0 365 aa28.44■■■□□ 2.14
SNX3-203ENST00000368979 CYP46A1Q9Y6A2 500 aa28.44■■■□□ 2.14
SNX3-203ENST00000368979 ECE2O60344 883 aa28.43■■■□□ 2.14
SNX3-203ENST00000368979 CPA1P15085 419 aa28.43■■■□□ 2.14
SNX3-203ENST00000368979 NEK1Q96PY6 1258 aa28.43■■■□□ 2.14
SNX3-203ENST00000368979 TIAM2Q8IVF5 1701 aa28.42■■■□□ 2.14
SNX3-203ENST00000368979 COL9A3Q14050 684 aaPredicted RBP28.42■■■□□ 2.14
SNX3-203ENST00000368979 BLOC1S2Q6QNY1 142 aa28.42■■■□□ 2.14
SNX3-203ENST00000368979 KLHL34Q8N239 644 aa28.42■■■□□ 2.14
SNX3-203ENST00000368979 SPON1Q9HCB6 807 aa28.42■■■□□ 2.14
SNX3-203ENST00000368979 AATFQ9NY61 560 aaKnown RBP eCLIP28.42■■■□□ 2.14
SNX3-203ENST00000368979 SCN9AQ15858 1988 aa28.42■■■□□ 2.14
SNX3-203ENST00000368979 MROH7-TTC4A0A0A0MT08 1334 aa28.42■■■□□ 2.14
SNX3-203ENST00000368979 MYH2Q9UKX2 1941 aa28.41■■■□□ 2.14
SNX3-203ENST00000368979 E7EWF7 191 aa28.41■■■□□ 2.14
SNX3-203ENST00000368979 PPIP5K2O43314 1243 aa28.41■■■□□ 2.14
SNX3-203ENST00000368979 LDHCP07864 332 aa28.41■■■□□ 2.14
SNX3-203ENST00000368979 RPS6KB1P23443 525 aa28.41■■■□□ 2.14
SNX3-203ENST00000368979 DIXDC1Q155Q3 683 aa28.41■■■□□ 2.14
SNX3-203ENST00000368979 CERS5Q8N5B7 392 aa28.41■■■□□ 2.14
SNX3-203ENST00000368979 NACAP1Q9BZK3 213 aa28.41■■■□□ 2.14
SNX3-203ENST00000368979 NAPBQ9H115 298 aa28.41■■■□□ 2.14
SNX3-203ENST00000368979 FER1L6Q2WGJ9 1857 aa28.4■■■□□ 2.14
SNX3-203ENST00000368979 ZNF213O14771 459 aa28.4■■■□□ 2.14
SNX3-203ENST00000368979 HAND2P61296 217 aa28.4■■■□□ 2.14
SNX3-203ENST00000368979 FBXW7Q969H0 707 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms