RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 RIMBP3CA6NJZ7 1639 aa20.54■□□□□ 0.88
CHTOP-201ENST00000368686 RIMBP3BA6NNM3 1639 aa20.54■□□□□ 0.88
CHTOP-201ENST00000368686 RIMBP3Q9UFD9 1639 aa20.54■□□□□ 0.88
CHTOP-201ENST00000368686 RNF40O75150 1001 aa20.53■□□□□ 0.88
CHTOP-201ENST00000368686 VSNL1P62760 191 aa20.53■□□□□ 0.88
CHTOP-201ENST00000368686 TC2NQ8N9U0 490 aa20.53■□□□□ 0.88
CHTOP-201ENST00000368686 TACO1Q9BSH4 297 aaKnown RBP20.53■□□□□ 0.88
CHTOP-201ENST00000368686 SPTLC2O15270 562 aa20.53■□□□□ 0.88
CHTOP-201ENST00000368686 HMGB1P09429 215 aaKnown RBP20.53■□□□□ 0.88
CHTOP-201ENST00000368686 PDILTQ8N807 584 aa20.53■□□□□ 0.88
CHTOP-201ENST00000368686 KAT2BQ92831 832 aa20.53■□□□□ 0.88
CHTOP-201ENST00000368686 NUDT16Q96DE0 195 aaKnown RBP20.53■□□□□ 0.88
CHTOP-201ENST00000368686 CCDC61Q9Y6R9 512 aa20.53■□□□□ 0.88
CHTOP-201ENST00000368686 U3KPZ7 1027 aaPredicted RBP20.53■□□□□ 0.88
CHTOP-201ENST00000368686 HNRNPH1P31943 449 aaKnown RBP20.52■□□□□ 0.88
CHTOP-201ENST00000368686 AGLP35573 1532 aa20.52■□□□□ 0.88
CHTOP-201ENST00000368686 KIF5CO60282 957 aa20.52■□□□□ 0.88
CHTOP-201ENST00000368686 INTS13Q9NVM9 706 aa20.52■□□□□ 0.88
CHTOP-201ENST00000368686 KDRP35968 1356 aa20.52■□□□□ 0.87
CHTOP-201ENST00000368686 EXOC5O00471 708 aa20.51■□□□□ 0.87
CHTOP-201ENST00000368686 CMA1P23946 247 aa20.51■□□□□ 0.87
CHTOP-201ENST00000368686 SPECC1LQ69YQ0 1117 aa20.51■□□□□ 0.87
CHTOP-201ENST00000368686 OLFM4Q6UX06 510 aa20.51■□□□□ 0.87
CHTOP-201ENST00000368686 POTEDQ86YR6 584 aa20.51■□□□□ 0.87
CHTOP-201ENST00000368686 MRPL44Q9H9J2 332 aaKnown RBP20.51■□□□□ 0.87
CHTOP-201ENST00000368686 LRRIQ3A6PVS8 624 aaPredicted RBP20.51■□□□□ 0.87
CHTOP-201ENST00000368686 GUCY1B3Q02153 619 aa20.51■□□□□ 0.87
CHTOP-201ENST00000368686 DESI2Q9BSY9 194 aa20.51■□□□□ 0.87
CHTOP-201ENST00000368686 CLIC4Q9Y696 253 aa20.51■□□□□ 0.87
CHTOP-201ENST00000368686 NCAPD2Q15021 1401 aa20.5■□□□□ 0.87
CHTOP-201ENST00000368686 SHOX2O60902 331 aaPredicted RBP20.5■□□□□ 0.87
CHTOP-201ENST00000368686 PRPF6O94906 941 aaKnown RBP20.5■□□□□ 0.87
CHTOP-201ENST00000368686 RHOXF2BP0C7M4 288 aa20.5■□□□□ 0.87
CHTOP-201ENST00000368686 PFKFB1P16118 471 aa20.5■□□□□ 0.87
CHTOP-201ENST00000368686 PIP4K2BP78356 416 aa20.5■□□□□ 0.87
CHTOP-201ENST00000368686 TAF7Q15545 349 aaPredicted RBP20.5■□□□□ 0.87
CHTOP-201ENST00000368686 WDR93Q6P2C0 686 aa20.5■□□□□ 0.87
CHTOP-201ENST00000368686 OSCARQ8IYS5 282 aa20.5■□□□□ 0.87
CHTOP-201ENST00000368686 RHOXF2Q9BQY4 288 aa20.5■□□□□ 0.87
CHTOP-201ENST00000368686 NALCNQ8IZF0 1738 aa20.5■□□□□ 0.87
CHTOP-201ENST00000368686 OVOS2A0A0J9YW53 1432 aa20.5■□□□□ 0.87
CHTOP-201ENST00000368686 OVOS2Q6IE36 1432 aa20.5■□□□□ 0.87
CHTOP-201ENST00000368686 FMN2Q9NZ56 1722 aa20.5■□□□□ 0.87
CHTOP-201ENST00000368686 CARMIL3Q8ND23 1372 aa20.5■□□□□ 0.87
CHTOP-201ENST00000368686 CTAGE15A4D2H0 777 aa20.5■□□□□ 0.87
CHTOP-201ENST00000368686 CTAGE8P0CG41 777 aa20.5■□□□□ 0.87
CHTOP-201ENST00000368686 LIG3P49916 1009 aa20.5■□□□□ 0.87
CHTOP-201ENST00000368686 TRDNQ13061 729 aa20.5■□□□□ 0.87
CHTOP-201ENST00000368686 ISM2Q6H9L7 571 aa20.5■□□□□ 0.87
CHTOP-201ENST00000368686 CTAGE6Q86UF2 777 aa20.5■□□□□ 0.87
CHTOP-201ENST00000368686 ARHGEF25Q86VW2 580 aa20.5■□□□□ 0.87
CHTOP-201ENST00000368686 CTAGE4Q8IX94 777 aa20.5■□□□□ 0.87
CHTOP-201ENST00000368686 C19orf44Q9H6X5 657 aa20.5■□□□□ 0.87
CHTOP-201ENST00000368686 FANCLQ9NW38 375 aa20.5■□□□□ 0.87
CHTOP-201ENST00000368686 EBAG9O00559 213 aa20.49■□□□□ 0.87
CHTOP-201ENST00000368686 SETQ01105 290 aaPredicted RBP20.49■□□□□ 0.87
CHTOP-201ENST00000368686 WHAMMP3Q1A5X7 153 aa20.49■□□□□ 0.87
CHTOP-201ENST00000368686 EP400NLQ6ZTU2 488 aa20.49■□□□□ 0.87
CHTOP-201ENST00000368686 BOLA2Q9H3K6 86 aa20.49■□□□□ 0.87
CHTOP-201ENST00000368686 CTAGE9A4FU28 777 aa20.48■□□□□ 0.87
CHTOP-201ENST00000368686 SYF2O95926 243 aaKnown RBP20.48■□□□□ 0.87
CHTOP-201ENST00000368686 ADKP55263 362 aaKnown RBP20.48■□□□□ 0.87
CHTOP-201ENST00000368686 SATB1Q01826 763 aa20.48■□□□□ 0.87
CHTOP-201ENST00000368686 KCNV1Q6PIU1 500 aa20.48■□□□□ 0.87
CHTOP-201ENST00000368686 DHX32Q7L7V1 743 aaKnown RBP20.48■□□□□ 0.87
CHTOP-201ENST00000368686 EAF2Q96CJ1 260 aaPredicted RBP20.48■□□□□ 0.87
CHTOP-201ENST00000368686 CARD10Q9BWT7 1032 aa20.48■□□□□ 0.87
CHTOP-201ENST00000368686 LRRC2Q9BYS8 371 aa20.48■□□□□ 0.87
CHTOP-201ENST00000368686 IRX2Q9BZI1 471 aaPredicted RBP20.48■□□□□ 0.87
CHTOP-201ENST00000368686 A1CFQ9NQ94 594 aaKnown RBP20.48■□□□□ 0.87
CHTOP-201ENST00000368686 DIP2CQ9Y2E4 1556 aa20.48■□□□□ 0.87
CHTOP-201ENST00000368686 GNAT3A8MTJ3 354 aa20.48■□□□□ 0.87
CHTOP-201ENST00000368686 KIF4BQ2VIQ3 1234 aa20.48■□□□□ 0.87
CHTOP-201ENST00000368686 SMARCC1Q92922 1105 aaPredicted RBP20.48■□□□□ 0.87
CHTOP-201ENST00000368686 SEC62Q99442 399 aaKnown RBP20.48■□□□□ 0.87
CHTOP-201ENST00000368686 PA2G4Q9UQ80 394 aaKnown RBP20.48■□□□□ 0.87
CHTOP-201ENST00000368686 FAM169AQ9Y6X4 670 aa20.48■□□□□ 0.87
CHTOP-201ENST00000368686 LAMA4Q16363 1823 aa20.48■□□□□ 0.87
CHTOP-201ENST00000368686 CYP21A2P08686 494 aa20.47■□□□□ 0.87
CHTOP-201ENST00000368686 TDO2P48775 406 aa20.47■□□□□ 0.87
CHTOP-201ENST00000368686 PTPN21Q16825 1174 aa20.47■□□□□ 0.87
CHTOP-201ENST00000368686 PLEKHO1Q53GL0 409 aaPredicted RBP20.47■□□□□ 0.87
CHTOP-201ENST00000368686 LZTFL1Q9NQ48 299 aa20.47■□□□□ 0.87
CHTOP-201ENST00000368686 BRAPQ7Z569 592 aa20.47■□□□□ 0.87
CHTOP-201ENST00000368686 CNPY4Q8N129 248 aa20.47■□□□□ 0.87
CHTOP-201ENST00000368686 NAA15Q9BXJ9 866 aaKnown RBP20.47■□□□□ 0.87
CHTOP-201ENST00000368686 AGXT2Q9BYV1 514 aa20.47■□□□□ 0.87
CHTOP-201ENST00000368686 CDHR2Q9BYE9 1310 aa20.47■□□□□ 0.87
CHTOP-201ENST00000368686 MCM3P25205 808 aa20.46■□□□□ 0.87
CHTOP-201ENST00000368686 CCT2P78371 535 aaKnown RBP20.46■□□□□ 0.87
CHTOP-201ENST00000368686 MAP9Q49MG5 647 aa20.46■□□□□ 0.87
CHTOP-201ENST00000368686 STAG1Q8WVM7 1258 aa20.46■□□□□ 0.87
CHTOP-201ENST00000368686 PANX2Q96RD6 677 aa20.46■□□□□ 0.87
CHTOP-201ENST00000368686 CCDC8Q9H0W5 538 aaPredicted RBP20.46■□□□□ 0.87
CHTOP-201ENST00000368686 ADGRG1Q9Y653 693 aa20.46■□□□□ 0.87
CHTOP-201ENST00000368686 COL15A1P39059 1388 aa20.46■□□□□ 0.87
CHTOP-201ENST00000368686 PI4KAP2A4QPH2 592 aa20.46■□□□□ 0.87
CHTOP-201ENST00000368686 SYKP43405 635 aa20.46■□□□□ 0.87
CHTOP-201ENST00000368686 TTLL5Q6EMB2 1281 aa20.46■□□□□ 0.87
CHTOP-201ENST00000368686 PI4KAP1Q8N8J0 262 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms